RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 ARHGEF25Q86VW2 580 aa37.94■■■■□ 3.66
KTN1-215ENST00000554567 KCNH5Q8NCM2 988 aa37.94■■■■□ 3.66
KTN1-215ENST00000554567 CPSF1Q10570 1443 aaKnown RBP37.93■■■■□ 3.66
KTN1-215ENST00000554567 LRRC37A3O60309 1634 aa37.92■■■■□ 3.66
KTN1-215ENST00000554567 PEAK1Q9H792 1746 aa37.91■■■■□ 3.66
KTN1-215ENST00000554567 PTF1AQ7RTS3 328 aa37.9■■■■□ 3.66
KTN1-215ENST00000554567 TTC21AQ8NDW8 1320 aa37.89■■■■□ 3.66
KTN1-215ENST00000554567 MARCH10Q8NA82 808 aaPredicted RBP37.88■■■■□ 3.65
KTN1-215ENST00000554567 KTN1Q86UP2 1357 aaKnown RBP37.88■■■■□ 3.65
KTN1-215ENST00000554567 AKAP12Q02952 1782 aa37.88■■■■□ 3.65
KTN1-215ENST00000554567 CDCA7Q9BWT1 371 aaPredicted RBP37.87■■■■□ 3.65
KTN1-215ENST00000554567 BCL11BQ9C0K0 894 aaPredicted RBP37.87■■■■□ 3.65
KTN1-215ENST00000554567 RGPD5Q99666 1765 aa37.87■■■■□ 3.65
KTN1-215ENST00000554567 PLSCR1O15162 318 aa37.86■■■■□ 3.65
KTN1-215ENST00000554567 SPON1Q9HCB6 807 aa37.86■■■■□ 3.65
KTN1-215ENST00000554567 SBF2Q86WG5 1849 aa37.86■■■■□ 3.65
KTN1-215ENST00000554567 CARD10Q9BWT7 1032 aa37.85■■■■□ 3.65
KTN1-215ENST00000554567 PPP1R1BQ9UD71 204 aaPredicted RBP37.85■■■■□ 3.65
KTN1-215ENST00000554567 KCNQ2O43526 872 aa37.83■■■■□ 3.65
KTN1-215ENST00000554567 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.83■■■■□ 3.652e-6■■■□□ 19.2
KTN1-215ENST00000554567 WNK3Q9BYP7 1800 aa37.8■■■■□ 3.64
KTN1-215ENST00000554567 EXOC5O00471 708 aa37.79■■■■□ 3.64
KTN1-215ENST00000554567 ANO8Q9HCE9 1232 aaPredicted RBP37.77■■■■□ 3.64
KTN1-215ENST00000554567 NFAT5O94916 1531 aa37.77■■■■□ 3.64
KTN1-215ENST00000554567 TMC1Q8TDI8 760 aa37.76■■■■□ 3.64
KTN1-215ENST00000554567 PROM2Q8N271 834 aa37.75■■■■□ 3.63
KTN1-215ENST00000554567 CARD11Q9BXL7 1154 aa37.75■■■■□ 3.63
KTN1-215ENST00000554567 RGPD3A6NKT7 1758 aaPredicted RBP37.75■■■■□ 3.63
KTN1-215ENST00000554567 RGPD4Q7Z3J3 1758 aa37.75■■■■□ 3.63
KTN1-215ENST00000554567 NME9Q86XW9 330 aa37.73■■■■□ 3.63
KTN1-215ENST00000554567 CCDC7Q96M83 1385 aa37.71■■■■□ 3.63
KTN1-215ENST00000554567 BCL9O00512 1426 aa37.7■■■■□ 3.63
KTN1-215ENST00000554567 MON2Q7Z3U7 1717 aa37.7■■■■□ 3.63
KTN1-215ENST00000554567 PDGFDQ9GZP0 370 aaPredicted RBP37.69■■■■□ 3.62
KTN1-215ENST00000554567 NLRP2Q9NX02 1062 aa37.69■■■■□ 3.62
KTN1-215ENST00000554567 SBNO2Q9Y2G9 1366 aa37.68■■■■□ 3.62
KTN1-215ENST00000554567 HDGFL2Q7Z4V5 671 aaPredicted RBP37.67■■■■□ 3.62
KTN1-215ENST00000554567 SLC12A5Q9H2X9 1139 aa37.67■■■■□ 3.62
KTN1-215ENST00000554567 USP31Q70CQ4 1352 aa37.67■■■■□ 3.62
KTN1-215ENST00000554567 TXNRD1Q16881 649 aa37.66■■■■□ 3.62
KTN1-215ENST00000554567 CD163L1Q9NR16 1453 aa37.64■■■■□ 3.62
KTN1-215ENST00000554567 DCAF8L1A6NGE4 600 aa37.64■■■■□ 3.62
KTN1-215ENST00000554567 ZBTB7AO95365 584 aa37.64■■■■□ 3.62
KTN1-215ENST00000554567 YY1P25490 414 aa37.64■■■■□ 3.62
KTN1-215ENST00000554567 ERBB3P21860 1342 aa37.62■■■■□ 3.61
KTN1-215ENST00000554567 ABCC6O95255 1503 aa37.62■■■■□ 3.61
KTN1-215ENST00000554567 ACSBG1Q96GR2 724 aa37.62■■■■□ 3.61
KTN1-215ENST00000554567 STK32BQ9NY57 414 aa37.62■■■■□ 3.61
KTN1-215ENST00000554567 TNS2Q63HR2 1409 aa37.61■■■■□ 3.61
KTN1-215ENST00000554567 NINLQ9Y2I6 1382 aa37.61■■■■□ 3.61
KTN1-215ENST00000554567 ANKRD24Q8TF21 1146 aa37.59■■■■□ 3.61
KTN1-215ENST00000554567 CASZ1Q86V15 1759 aa37.59■■■■□ 3.61
KTN1-215ENST00000554567 IL2RBP14784 551 aa37.58■■■■□ 3.61
KTN1-215ENST00000554567 TERF2IPQ9NYB0 399 aa37.58■■■■□ 3.61
KTN1-215ENST00000554567 ATF5Q9Y2D1 282 aaPredicted RBP37.58■■■■□ 3.61
KTN1-215ENST00000554567 LTN1O94822 1766 aa37.57■■■■□ 3.6
KTN1-215ENST00000554567 SLC15A2Q16348 729 aa37.56■■■■□ 3.6
KTN1-215ENST00000554567 TONSLQ96HA7 1378 aa37.55■■■■□ 3.6
KTN1-215ENST00000554567 EDC4Q6P2E9 1401 aaKnown RBP37.54■■■■□ 3.6
KTN1-215ENST00000554567 USP54Q70EL1 1684 aa37.53■■■■□ 3.6
KTN1-215ENST00000554567 A0A1W2PP64 1363 aa37.52■■■■□ 3.6
KTN1-215ENST00000554567 PTGER2P43116 358 aa37.49■■■■□ 3.59
KTN1-215ENST00000554567 NHSQ6T4R5 1651 aa37.48■■■■□ 3.59
KTN1-215ENST00000554567 LTV1Q96GA3 475 aaPredicted RBP37.48■■■■□ 3.59
KTN1-215ENST00000554567 KAT6BQ8WYB5 2073 aa37.47■■■■□ 3.59
KTN1-215ENST00000554567 PUS7Q96PZ0 661 aaKnown RBP37.45■■■■□ 3.59
KTN1-215ENST00000554567 IP6K1Q92551 441 aa37.44■■■■□ 3.58
KTN1-215ENST00000554567 MYOM1P52179 1685 aa37.44■■■■□ 3.58
KTN1-215ENST00000554567 DDX54Q8TDD1 881 aaKnown RBP37.43■■■■□ 3.58
KTN1-215ENST00000554567 ST20-MTHFSA0A0A6YYL1 179 aa37.41■■■■□ 3.58
KTN1-215ENST00000554567 MTFR1LQ9H019 292 aa37.41■■■■□ 3.58
KTN1-215ENST00000554567 COG3Q96JB2 828 aa37.39■■■■□ 3.58
KTN1-215ENST00000554567 FHDC1Q9C0D6 1143 aaPredicted RBP37.39■■■■□ 3.58
KTN1-215ENST00000554567 BTAF1O14981 1849 aa37.38■■■■□ 3.58
KTN1-215ENST00000554567 TESK2Q96S53 571 aa37.38■■■■□ 3.57
KTN1-215ENST00000554567 FBLN1P23142 703 aa37.37■■■■□ 3.57
KTN1-215ENST00000554567 SYT17Q9BSW7 474 aa37.35■■■■□ 3.57
KTN1-215ENST00000554567 AMPHP49418 695 aa37.34■■■■□ 3.57
KTN1-215ENST00000554567 LRRC4BQ9NT99 713 aa37.34■■■■□ 3.57
KTN1-215ENST00000554567 MAP3K19Q56UN5 1328 aa37.34■■■■□ 3.57
KTN1-215ENST00000554567 ZNF827Q17R98 1081 aa37.33■■■■□ 3.57
KTN1-215ENST00000554567 SGIP1Q9BQI5 828 aa37.32■■■■□ 3.56
KTN1-215ENST00000554567 SYTL4Q96C24 671 aaPredicted RBP37.31■■■■□ 3.56
KTN1-215ENST00000554567 HOXC9P31274 260 aa37.3■■■■□ 3.56
KTN1-215ENST00000554567 PAPPAQ13219 1627 aa37.28■■■■□ 3.56
KTN1-215ENST00000554567 ARXQ96QS3 562 aa37.28■■■■□ 3.56
KTN1-215ENST00000554567 FAM208AQ9UK61 1670 aaKnown RBP37.26■■■■□ 3.56
KTN1-215ENST00000554567 SLC24A1O60721 1099 aa37.26■■■■□ 3.56
KTN1-215ENST00000554567 PRIM1P49642 420 aaKnown RBP37.25■■■■□ 3.55
KTN1-215ENST00000554567 KCNQ4P56696 695 aa37.24■■■■□ 3.55
KTN1-215ENST00000554567 SLC27A3Q5K4L6 730 aa37.23■■■■□ 3.55
KTN1-215ENST00000554567 ZCRB1Q8TBF4 217 aaKnown RBP37.22■■■■□ 3.55
KTN1-215ENST00000554567 AKT1S1Q96B36 256 aa37.22■■■■□ 3.55
KTN1-215ENST00000554567 RRS1Q15050 365 aaKnown RBP37.21■■■■□ 3.55
KTN1-215ENST00000554567 ANKRD36BQ8N2N9 1353 aa37.2■■■■□ 3.55
KTN1-215ENST00000554567 RGPD2P0DJD1 1756 aa37.2■■■■□ 3.55
KTN1-215ENST00000554567 GGNBP2Q9H3C7 697 aa37.2■■■■□ 3.55
KTN1-215ENST00000554567 UTRNP46939 3433 aa37.18■■■■□ 3.54
KTN1-215ENST00000554567 TMF1P82094 1093 aa37.17■■■■□ 3.54
KTN1-215ENST00000554567 TFCP2L1Q9NZI6 479 aa37.17■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms