RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 PEAK1Q9H792 1746 aa19.9■□□□□ 0.78
SPTLC2-202ENST00000554365 ZEB1P37275 1124 aaPredicted RBP19.89■□□□□ 0.77
SPTLC2-202ENST00000554365 WDR17Q8IZU2 1322 aa19.89■□□□□ 0.77
SPTLC2-202ENST00000554365 PPP1R1BQ9UD71 204 aaPredicted RBP19.89■□□□□ 0.77
SPTLC2-202ENST00000554365 TRPM1Q7Z4N2 1603 aa19.88■□□□□ 0.77
SPTLC2-202ENST00000554365 CPSF1Q10570 1443 aaKnown RBP19.88■□□□□ 0.77
SPTLC2-202ENST00000554365 TTC21BQ7Z4L5 1316 aa19.88■□□□□ 0.77
SPTLC2-202ENST00000554365 ZNF692Q9BU19 519 aaPredicted RBP19.88■□□□□ 0.77
SPTLC2-202ENST00000554365 SPON1Q9HCB6 807 aa19.88■□□□□ 0.77
SPTLC2-202ENST00000554365 COL18A1P39060 1754 aa19.88■□□□□ 0.77
SPTLC2-202ENST00000554365 ROCK2O75116 1388 aaKnown RBP19.87■□□□□ 0.77
SPTLC2-202ENST00000554365 CSB-PGBD3P0DP91 1061 aa19.87■□□□□ 0.77
SPTLC2-202ENST00000554365 KCNH5Q8NCM2 988 aa19.87■□□□□ 0.77
SPTLC2-202ENST00000554365 PLSCR1O15162 318 aa19.86■□□□□ 0.77
SPTLC2-202ENST00000554365 KCNQ2O43526 872 aa19.86■□□□□ 0.77
SPTLC2-202ENST00000554365 PTF1AQ7RTS3 328 aa19.86■□□□□ 0.77
SPTLC2-202ENST00000554365 ARHGEF25Q86VW2 580 aa19.86■□□□□ 0.77
SPTLC2-202ENST00000554365 BCL11BQ9C0K0 894 aaPredicted RBP19.86■□□□□ 0.77
SPTLC2-202ENST00000554365 MARCH10Q8NA82 808 aaPredicted RBP19.85■□□□□ 0.77
SPTLC2-202ENST00000554365 SBF2Q86WG5 1849 aa19.84■□□□□ 0.77
SPTLC2-202ENST00000554365 WNK3Q9BYP7 1800 aa19.84■□□□□ 0.77
SPTLC2-202ENST00000554365 CDCA7Q9BWT1 371 aaPredicted RBP19.84■□□□□ 0.77
SPTLC2-202ENST00000554365 TTC21AQ8NDW8 1320 aa19.83■□□□□ 0.77
SPTLC2-202ENST00000554365 CARD10Q9BWT7 1032 aa19.83■□□□□ 0.77
SPTLC2-202ENST00000554365 ANO8Q9HCE9 1232 aaPredicted RBP19.83■□□□□ 0.77
SPTLC2-202ENST00000554365 RGPD3A6NKT7 1758 aaPredicted RBP19.83■□□□□ 0.76
SPTLC2-202ENST00000554365 AKAP12Q02952 1782 aa19.83■□□□□ 0.76
SPTLC2-202ENST00000554365 RGPD4Q7Z3J3 1758 aa19.83■□□□□ 0.76
SPTLC2-202ENST00000554365 KTN1Q86UP2 1357 aaKnown RBP19.83■□□□□ 0.76
SPTLC2-202ENST00000554365 RGPD5Q99666 1765 aa19.82■□□□□ 0.76
SPTLC2-202ENST00000554365 YY1P25490 414 aa19.81■□□□□ 0.76
SPTLC2-202ENST00000554365 EXOC5O00471 708 aa19.8■□□□□ 0.76
SPTLC2-202ENST00000554365 DCAF8L1A6NGE4 600 aa19.79■□□□□ 0.76
SPTLC2-202ENST00000554365 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
SPTLC2-202ENST00000554365 NFAT5O94916 1531 aa19.79■□□□□ 0.76
SPTLC2-202ENST00000554365 PROM2Q8N271 834 aa19.78■□□□□ 0.76
SPTLC2-202ENST00000554365 NINLQ9Y2I6 1382 aa19.78■□□□□ 0.76
SPTLC2-202ENST00000554365 BCL9O00512 1426 aa19.77■□□□□ 0.76
SPTLC2-202ENST00000554365 PDGFDQ9GZP0 370 aaPredicted RBP19.77■□□□□ 0.76
SPTLC2-202ENST00000554365 CCDC7Q96M83 1385 aa19.77■□□□□ 0.76
SPTLC2-202ENST00000554365 ZBTB7AO95365 584 aa19.75■□□□□ 0.75
SPTLC2-202ENST00000554365 TXNRD1Q16881 649 aa19.75■□□□□ 0.75
SPTLC2-202ENST00000554365 CASZ1Q86V15 1759 aa19.75■□□□□ 0.75
SPTLC2-202ENST00000554365 MON2Q7Z3U7 1717 aa19.74■□□□□ 0.75
SPTLC2-202ENST00000554365 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
SPTLC2-202ENST00000554365 STK32BQ9NY57 414 aa19.74■□□□□ 0.75
SPTLC2-202ENST00000554365 TNS2Q63HR2 1409 aa19.74■□□□□ 0.75
SPTLC2-202ENST00000554365 ABCC6O95255 1503 aa19.73■□□□□ 0.75
SPTLC2-202ENST00000554365 NME9Q86XW9 330 aa19.73■□□□□ 0.75
SPTLC2-202ENST00000554365 CARD11Q9BXL7 1154 aa19.73■□□□□ 0.75
SPTLC2-202ENST00000554365 NLRP2Q9NX02 1062 aa19.73■□□□□ 0.75
SPTLC2-202ENST00000554365 ACSBG1Q96GR2 724 aa19.72■□□□□ 0.75
SPTLC2-202ENST00000554365 ATF5Q9Y2D1 282 aaPredicted RBP19.72■□□□□ 0.75
SPTLC2-202ENST00000554365 USP31Q70CQ4 1352 aa19.71■□□□□ 0.75
SPTLC2-202ENST00000554365 SLC15A2Q16348 729 aa19.71■□□□□ 0.75
SPTLC2-202ENST00000554365 ERBB3P21860 1342 aa19.71■□□□□ 0.75
SPTLC2-202ENST00000554365 SBNO2Q9Y2G9 1366 aa19.7■□□□□ 0.74
SPTLC2-202ENST00000554365 HDGFL2Q7Z4V5 671 aaPredicted RBP19.7■□□□□ 0.74
SPTLC2-202ENST00000554365 CD163L1Q9NR16 1453 aa19.69■□□□□ 0.74
SPTLC2-202ENST00000554365 IL2RBP14784 551 aa19.68■□□□□ 0.74
SPTLC2-202ENST00000554365 PTGER2P43116 358 aa19.68■□□□□ 0.74
SPTLC2-202ENST00000554365 ANKRD24Q8TF21 1146 aa19.68■□□□□ 0.74
SPTLC2-202ENST00000554365 SLC12A5Q9H2X9 1139 aa19.68■□□□□ 0.74
SPTLC2-202ENST00000554365 MYOM1P52179 1685 aa19.68■□□□□ 0.74
SPTLC2-202ENST00000554365 NHSQ6T4R5 1651 aa19.68■□□□□ 0.74
SPTLC2-202ENST00000554365 USP54Q70EL1 1684 aa19.67■□□□□ 0.74
SPTLC2-202ENST00000554365 LTN1O94822 1766 aa19.67■□□□□ 0.74
SPTLC2-202ENST00000554365 EDC4Q6P2E9 1401 aaKnown RBP19.66■□□□□ 0.74
SPTLC2-202ENST00000554365 TERF2IPQ9NYB0 399 aa19.65■□□□□ 0.74
SPTLC2-202ENST00000554365 MTFR1LQ9H019 292 aa19.64■□□□□ 0.73
SPTLC2-202ENST00000554365 A0A1W2PP64 1363 aa19.63■□□□□ 0.73
SPTLC2-202ENST00000554365 FHDC1Q9C0D6 1143 aaPredicted RBP19.63■□□□□ 0.73
SPTLC2-202ENST00000554365 LTV1Q96GA3 475 aaPredicted RBP19.61■□□□□ 0.73
SPTLC2-202ENST00000554365 SYT17Q9BSW7 474 aa19.61■□□□□ 0.73
SPTLC2-202ENST00000554365 BTAF1O14981 1849 aa19.6■□□□□ 0.73
SPTLC2-202ENST00000554365 DDX54Q8TDD1 881 aaKnown RBP19.6■□□□□ 0.73
SPTLC2-202ENST00000554365 IP6K1Q92551 441 aa19.59■□□□□ 0.73
SPTLC2-202ENST00000554365 PAPPAQ13219 1627 aa19.58■□□□□ 0.73
SPTLC2-202ENST00000554365 ZNF827Q17R98 1081 aa19.58■□□□□ 0.72
SPTLC2-202ENST00000554365 SGIP1Q9BQI5 828 aa19.58■□□□□ 0.72
SPTLC2-202ENST00000554365 PUS7Q96PZ0 661 aaKnown RBP19.57■□□□□ 0.72
SPTLC2-202ENST00000554365 ARXQ96QS3 562 aa19.57■□□□□ 0.72
SPTLC2-202ENST00000554365 LRRC4BQ9NT99 713 aa19.57■□□□□ 0.72
SPTLC2-202ENST00000554365 SYTL4Q96C24 671 aaPredicted RBP19.55■□□□□ 0.72
SPTLC2-202ENST00000554365 COG3Q96JB2 828 aa19.55■□□□□ 0.72
SPTLC2-202ENST00000554365 AMPHP49418 695 aa19.54■□□□□ 0.72
SPTLC2-202ENST00000554365 MAP3K19Q56UN5 1328 aa19.53■□□□□ 0.72
SPTLC2-202ENST00000554365 KAT6BQ8WYB5 2073 aa19.53■□□□□ 0.72
SPTLC2-202ENST00000554365 FAM208AQ9UK61 1670 aaKnown RBP19.53■□□□□ 0.72
SPTLC2-202ENST00000554365 ST20-MTHFSA0A0A6YYL1 179 aa19.53■□□□□ 0.72
SPTLC2-202ENST00000554365 FBLN1P23142 703 aa19.53■□□□□ 0.72
SPTLC2-202ENST00000554365 SLC27A3Q5K4L6 730 aa19.53■□□□□ 0.72
SPTLC2-202ENST00000554365 HOXC9P31274 260 aa19.52■□□□□ 0.72
SPTLC2-202ENST00000554365 ZNF784Q8NCA9 323 aaPredicted RBP19.52■□□□□ 0.72
SPTLC2-202ENST00000554365 AKT1S1Q96B36 256 aa19.52■□□□□ 0.72
SPTLC2-202ENST00000554365 TESK2Q96S53 571 aa19.52■□□□□ 0.72
SPTLC2-202ENST00000554365 PRIM1P49642 420 aaKnown RBP19.51■□□□□ 0.71
SPTLC2-202ENST00000554365 KLHL34Q8N239 644 aa19.51■□□□□ 0.71
SPTLC2-202ENST00000554365 KCNQ4P56696 695 aa19.5■□□□□ 0.71
SPTLC2-202ENST00000554365 ANKRD36BQ8N2N9 1353 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms