RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 POTEDQ86YR6 584 aa9.4□□□□□ -0.9
SLIRP-203ENST00000554074 CARD11Q9BXL7 1154 aa9.4□□□□□ -0.9
SLIRP-203ENST00000554074 CD163L1Q9NR16 1453 aa9.4□□□□□ -0.91
SLIRP-203ENST00000554074 NUP188Q5SRE5 1749 aa9.39□□□□□ -0.91
SLIRP-203ENST00000554074 USP31Q70CQ4 1352 aa9.39□□□□□ -0.91
SLIRP-203ENST00000554074 KTN1Q86UP2 1357 aaKnown RBP9.39□□□□□ -0.91
SLIRP-203ENST00000554074 TRIM26Q12899 539 aaPredicted RBP9.39□□□□□ -0.91
SLIRP-203ENST00000554074 USP35Q9P2H5 1018 aa9.39□□□□□ -0.91
SLIRP-203ENST00000554074 SLC24A1O60721 1099 aa9.38□□□□□ -0.91
SLIRP-203ENST00000554074 PDE3BQ13370 1112 aa9.38□□□□□ -0.91
SLIRP-203ENST00000554074 FAM182BQ5T319 152 aa9.38□□□□□ -0.91
SLIRP-203ENST00000554074 ARHGEF25Q86VW2 580 aa9.38□□□□□ -0.91
SLIRP-203ENST00000554074 NINLQ9Y2I6 1382 aa9.37□□□□□ -0.91
SLIRP-203ENST00000554074 WDR17Q8IZU2 1322 aa9.37□□□□□ -0.91
SLIRP-203ENST00000554074 FAM208AQ9UK61 1670 aaKnown RBP9.37□□□□□ -0.91
SLIRP-203ENST00000554074 EN1Q05925 392 aaPredicted RBP9.37□□□□□ -0.91
SLIRP-203ENST00000554074 CDCA7Q9BWT1 371 aaPredicted RBP9.37□□□□□ -0.91
SLIRP-203ENST00000554074 EDC4Q6P2E9 1401 aaKnown RBP9.37□□□□□ -0.91
SLIRP-203ENST00000554074 KAT6BQ8WYB5 2073 aa9.36□□□□□ -0.91
SLIRP-203ENST00000554074 TRIM37O94972 964 aa9.36□□□□□ -0.91
SLIRP-203ENST00000554074 CAMKK2Q96RR4 588 aa9.36□□□□□ -0.91
SLIRP-203ENST00000554074 AXIN2Q9Y2T1 843 aa9.36□□□□□ -0.91
SLIRP-203ENST00000554074 OVOS2A0A0G2JMS6 1433 aa9.36□□□□□ -0.91
SLIRP-203ENST00000554074 OVOS2A0A0J9YW53 1432 aa9.36□□□□□ -0.91
SLIRP-203ENST00000554074 BCL9O00512 1426 aa9.36□□□□□ -0.91
SLIRP-203ENST00000554074 OVOS2Q6IE36 1432 aa9.36□□□□□ -0.91
SLIRP-203ENST00000554074 TOM1L2Q6ZVM7 507 aa9.35□□□□□ -0.91
SLIRP-203ENST00000554074 HDGFL2Q7Z4V5 671 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-203ENST00000554074 CARD10Q9BWT7 1032 aa9.35□□□□□ -0.91
SLIRP-203ENST00000554074 CCDC7Q96M83 1385 aa9.35□□□□□ -0.91
SLIRP-203ENST00000554074 APBA3O96018 575 aa9.34□□□□□ -0.91
SLIRP-203ENST00000554074 EZH2Q15910 746 aaKnown RBP9.34□□□□□ -0.91
SLIRP-203ENST00000554074 TESK2Q96S53 571 aa9.34□□□□□ -0.91
SLIRP-203ENST00000554074 TERF2IPQ9NYB0 399 aa9.34□□□□□ -0.91
SLIRP-203ENST00000554074 A0A1W2PP64 1363 aa9.34□□□□□ -0.91
SLIRP-203ENST00000554074 ZBTB7CA1YPR0 619 aa9.33□□□□□ -0.92
SLIRP-203ENST00000554074 DDB1Q16531 1140 aa9.33□□□□□ -0.92
SLIRP-203ENST00000554074 SLC12A5Q9H2X9 1139 aa9.33□□□□□ -0.92
SLIRP-203ENST00000554074 NHSQ6T4R5 1651 aa9.32□□□□□ -0.92
SLIRP-203ENST00000554074 ST20-MTHFSA0A0A6YYL1 179 aa9.32□□□□□ -0.92
SLIRP-203ENST00000554074 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-203ENST00000554074 NME9Q86XW9 330 aa9.32□□□□□ -0.92
SLIRP-203ENST00000554074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.32□□□□□ -0.92
SLIRP-203ENST00000554074 TMC1Q8TDI8 760 aa9.32□□□□□ -0.92
SLIRP-203ENST00000554074 KIF20BQ96Q89 1820 aa9.32□□□□□ -0.92
SLIRP-203ENST00000554074 ERBB3P21860 1342 aa9.31□□□□□ -0.92
SLIRP-203ENST00000554074 TNS2Q63HR2 1409 aa9.31□□□□□ -0.92
SLIRP-203ENST00000554074 PLSCR1O15162 318 aa9.31□□□□□ -0.92
SLIRP-203ENST00000554074 CSB-PGBD3P0DP91 1061 aa9.31□□□□□ -0.92
SLIRP-203ENST00000554074 TIMELESSQ9UNS1 1208 aa9.31□□□□□ -0.92
SLIRP-203ENST00000554074 RGPD2P0DJD1 1756 aa9.31□□□□□ -0.92
SLIRP-203ENST00000554074 CLSPNQ9HAW4 1339 aa9.31□□□□□ -0.92
SLIRP-203ENST00000554074 ANKRD36BQ8N2N9 1353 aa9.3□□□□□ -0.92
SLIRP-203ENST00000554074 USP47Q96K76 1375 aa9.3□□□□□ -0.92
SLIRP-203ENST00000554074 SOX12O15370 315 aa9.3□□□□□ -0.92
SLIRP-203ENST00000554074 R3HDM1Q15032 1099 aaKnown RBP9.3□□□□□ -0.92
SLIRP-203ENST00000554074 NBPF14Q5TI25 921 aa9.3□□□□□ -0.92
SLIRP-203ENST00000554074 BCL11BQ9C0K0 894 aaPredicted RBP9.3□□□□□ -0.92
SLIRP-203ENST00000554074 CASZ1Q86V15 1759 aa9.29□□□□□ -0.92
SLIRP-203ENST00000554074 MYOM1P52179 1685 aa9.29□□□□□ -0.92
SLIRP-203ENST00000554074 BTAF1O14981 1849 aa9.29□□□□□ -0.92
SLIRP-203ENST00000554074 EXOC5O00471 708 aa9.29□□□□□ -0.92
SLIRP-203ENST00000554074 MARCH10Q8NA82 808 aaPredicted RBP9.29□□□□□ -0.92
SLIRP-203ENST00000554074 TMF1P82094 1093 aa9.28□□□□□ -0.92
SLIRP-203ENST00000554074 SHANK3Q9BYB0 1731 aa9.28□□□□□ -0.92
SLIRP-203ENST00000554074 IL2RBP14784 551 aa9.27□□□□□ -0.93
SLIRP-203ENST00000554074 CDCA8Q53HL2 280 aa9.27□□□□□ -0.93
SLIRP-203ENST00000554074 ANKRD24Q8TF21 1146 aa9.27□□□□□ -0.93
SLIRP-203ENST00000554074 IP6K1Q92551 441 aa9.27□□□□□ -0.93
SLIRP-203ENST00000554074 COG3Q96JB2 828 aa9.27□□□□□ -0.93
SLIRP-203ENST00000554074 MAP2P11137 1827 aaKnown RBP9.26□□□□□ -0.93
SLIRP-203ENST00000554074 RTL1A6NKG5 1358 aa9.26□□□□□ -0.93
SLIRP-203ENST00000554074 QSER1Q2KHR3 1735 aa9.26□□□□□ -0.93
SLIRP-203ENST00000554074 ANKRD26Q9UPS8 1709 aa9.26□□□□□ -0.93
SLIRP-203ENST00000554074 NLRP2Q9NX02 1062 aa9.26□□□□□ -0.93
SLIRP-203ENST00000554074 PAPPAQ13219 1627 aa9.25□□□□□ -0.93
SLIRP-203ENST00000554074 MAP3K19Q56UN5 1328 aa9.25□□□□□ -0.93
SLIRP-203ENST00000554074 DOT1LQ8TEK3 1739 aa9.25□□□□□ -0.93
SLIRP-203ENST00000554074 KIF24Q5T7B8 1368 aa9.24□□□□□ -0.93
SLIRP-203ENST00000554074 HOXC9P31274 260 aa9.24□□□□□ -0.93
SLIRP-203ENST00000554074 PTF1AQ7RTS3 328 aa9.24□□□□□ -0.93
SLIRP-203ENST00000554074 PROM2Q8N271 834 aa9.24□□□□□ -0.93
SLIRP-203ENST00000554074 LY75O60449 1722 aa9.24□□□□□ -0.93
SLIRP-203ENST00000554074 FYB1O15117 783 aa9.23□□□□□ -0.93
SLIRP-203ENST00000554074 KCNQ2O43526 872 aa9.22□□□□□ -0.93
SLIRP-203ENST00000554074 AMPHP49418 695 aa9.22□□□□□ -0.93
SLIRP-203ENST00000554074 TXNRD1Q16881 649 aa9.22□□□□□ -0.93
SLIRP-203ENST00000554074 SPON1Q9HCB6 807 aa9.22□□□□□ -0.93
SLIRP-203ENST00000554074 COL24A1Q17RW2 1714 aa9.22□□□□□ -0.93
SLIRP-203ENST00000554074 TUBGCP6Q96RT7 1819 aa9.21□□□□□ -0.93
SLIRP-203ENST00000554074 ANO8Q9HCE9 1232 aaPredicted RBP9.21□□□□□ -0.94
SLIRP-203ENST00000554074 PKD1L3Q7Z443 1732 aa9.21□□□□□ -0.94
SLIRP-203ENST00000554074 CGNL1Q0VF96 1302 aa9.21□□□□□ -0.94
SLIRP-203ENST00000554074 ITGB4P16144 1822 aa9.21□□□□□ -0.94
SLIRP-203ENST00000554074 SMG6Q86US8 1419 aaKnown RBP9.21□□□□□ -0.94
SLIRP-203ENST00000554074 MEGF6O75095 1541 aa9.21□□□□□ -0.94
SLIRP-203ENST00000554074 LTV1Q96GA3 475 aaPredicted RBP9.2□□□□□ -0.94
SLIRP-203ENST00000554074 GGNBP2Q9H3C7 697 aa9.2□□□□□ -0.94
SLIRP-203ENST00000554074 STK32BQ9NY57 414 aa9.2□□□□□ -0.94
SLIRP-203ENST00000554074 INSRP06213 1382 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms