RNA–Protein interactions for RNA: ENST00000553621.1

AC004817.1-201, humanhuman

TSL 4 BASIC

Gene AC004817.1, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004817.1-201ENST00000553621 AXIN2Q9Y2T1 843 aa11.09□□□□□ -0.63
AC004817.1-201ENST00000553621 DISP2A7MBM2 1401 aa11.09□□□□□ -0.63
AC004817.1-201ENST00000553621 BRD4O60885 1362 aaPredicted RBP11.08□□□□□ -0.64
AC004817.1-201ENST00000553621 AATKQ6ZMQ8 1374 aa11.08□□□□□ -0.64
AC004817.1-201ENST00000553621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.08□□□□□ -0.64
AC004817.1-201ENST00000553621 CARD11Q9BXL7 1154 aa11.08□□□□□ -0.64
AC004817.1-201ENST00000553621 CPSF1Q10570 1443 aaKnown RBP11.08□□□□□ -0.64
AC004817.1-201ENST00000553621 KTN1Q86UP2 1357 aaKnown RBP11.07□□□□□ -0.64
AC004817.1-201ENST00000553621 CSB-PGBD3P0DP91 1061 aa11.07□□□□□ -0.64
AC004817.1-201ENST00000553621 TMC1Q8TDI8 760 aa11.07□□□□□ -0.64
AC004817.1-201ENST00000553621 THRAP3Q9Y2W1 955 aaKnown RBP11.07□□□□□ -0.64
AC004817.1-201ENST00000553621 TONSLQ96HA7 1378 aa11.06□□□□□ -0.64
AC004817.1-201ENST00000553621 NME9Q86XW9 330 aa11.06□□□□□ -0.64
AC004817.1-201ENST00000553621 LRRC37A3O60309 1634 aa11.06□□□□□ -0.64
AC004817.1-201ENST00000553621 LRP5O75197 1615 aa11.06□□□□□ -0.64
AC004817.1-201ENST00000553621 DDB1Q16531 1140 aa11.05□□□□□ -0.64
AC004817.1-201ENST00000553621 PTF1AQ7RTS3 328 aa11.05□□□□□ -0.64
AC004817.1-201ENST00000553621 ARHGEF25Q86VW2 580 aa11.05□□□□□ -0.64
AC004817.1-201ENST00000553621 ZNF692Q9BU19 519 aaPredicted RBP11.05□□□□□ -0.64
AC004817.1-201ENST00000553621 WDR17Q8IZU2 1322 aa11.05□□□□□ -0.64
AC004817.1-201ENST00000553621 OVOS2A0A0G2JMS6 1433 aa11.04□□□□□ -0.64
AC004817.1-201ENST00000553621 OVOS2A0A0J9YW53 1432 aa11.04□□□□□ -0.64
AC004817.1-201ENST00000553621 OVOS2Q6IE36 1432 aa11.04□□□□□ -0.64
AC004817.1-201ENST00000553621 KCNH5Q8NCM2 988 aa11.04□□□□□ -0.64
AC004817.1-201ENST00000553621 CD163L1Q9NR16 1453 aa11.04□□□□□ -0.64
AC004817.1-201ENST00000553621 TTC21AQ8NDW8 1320 aa11.04□□□□□ -0.64
AC004817.1-201ENST00000553621 NFAT5O94916 1531 aa11.04□□□□□ -0.64
AC004817.1-201ENST00000553621 SLC12A5Q9H2X9 1139 aa11.03□□□□□ -0.64
AC004817.1-201ENST00000553621 PARP4Q9UKK3 1724 aaKnown RBP11.03□□□□□ -0.64
AC004817.1-201ENST00000553621 COL18A1P39060 1754 aa11.03□□□□□ -0.64
AC004817.1-201ENST00000553621 MARCH10Q8NA82 808 aaPredicted RBP11.02□□□□□ -0.65
AC004817.1-201ENST00000553621 AKAP12Q02952 1782 aa11.02□□□□□ -0.65
AC004817.1-201ENST00000553621 PARD3Q8TEW0 1356 aa11.02□□□□□ -0.65
AC004817.1-201ENST00000553621 SBNO2Q9Y2G9 1366 aa11.02□□□□□ -0.65
AC004817.1-201ENST00000553621 NUP188Q5SRE5 1749 aa11.01□□□□□ -0.65
AC004817.1-201ENST00000553621 HDGFL2Q7Z4V5 671 aaPredicted RBP11.01□□□□□ -0.65
AC004817.1-201ENST00000553621 RREB1Q92766 1687 aa11.01□□□□□ -0.65
AC004817.1-201ENST00000553621 A0A1W2PP64 1363 aa11.01□□□□□ -0.65
AC004817.1-201ENST00000553621 PEAK1Q9H792 1746 aa11.01□□□□□ -0.65
AC004817.1-201ENST00000553621 NBPF14Q5TI25 921 aa11□□□□□ -0.65
AC004817.1-201ENST00000553621 CARD10Q9BWT7 1032 aa11□□□□□ -0.65
AC004817.1-201ENST00000553621 ANO8Q9HCE9 1232 aaPredicted RBP11□□□□□ -0.65
AC004817.1-201ENST00000553621 MON2Q7Z3U7 1717 aa11□□□□□ -0.65
AC004817.1-201ENST00000553621 NLRP2Q9NX02 1062 aa10.99□□□□□ -0.65
AC004817.1-201ENST00000553621 USP31Q70CQ4 1352 aa10.99□□□□□ -0.65
AC004817.1-201ENST00000553621 ST20-MTHFSA0A0A6YYL1 179 aa10.98□□□□□ -0.65
AC004817.1-201ENST00000553621 ANKRD24Q8TF21 1146 aa10.98□□□□□ -0.65
AC004817.1-201ENST00000553621 LTV1Q96GA3 475 aaPredicted RBP10.98□□□□□ -0.65
AC004817.1-201ENST00000553621 ACSBG1Q96GR2 724 aa10.98□□□□□ -0.65
AC004817.1-201ENST00000553621 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
AC004817.1-201ENST00000553621 ERBB3P21860 1342 aa10.98□□□□□ -0.65
AC004817.1-201ENST00000553621 TNS2Q63HR2 1409 aa10.98□□□□□ -0.65
AC004817.1-201ENST00000553621 EDC4Q6P2E9 1401 aaKnown RBP10.98□□□□□ -0.65
AC004817.1-201ENST00000553621 WNK3Q9BYP7 1800 aa10.98□□□□□ -0.65
AC004817.1-201ENST00000553621 EXOC5O00471 708 aa10.97□□□□□ -0.65
AC004817.1-201ENST00000553621 KCNQ2O43526 872 aa10.97□□□□□ -0.65
AC004817.1-201ENST00000553621 FBLN1P23142 703 aa10.97□□□□□ -0.65
AC004817.1-201ENST00000553621 TESK2Q96S53 571 aa10.97□□□□□ -0.65
AC004817.1-201ENST00000553621 CDCA7Q9BWT1 371 aaPredicted RBP10.97□□□□□ -0.65
AC004817.1-201ENST00000553621 PDGFDQ9GZP0 370 aaPredicted RBP10.97□□□□□ -0.65
AC004817.1-201ENST00000553621 CCDC7Q96M83 1385 aa10.97□□□□□ -0.65
AC004817.1-201ENST00000553621 RGPD5Q99666 1765 aa10.96□□□□□ -0.65
AC004817.1-201ENST00000553621 PROM2Q8N271 834 aa10.96□□□□□ -0.65
AC004817.1-201ENST00000553621 TERF2IPQ9NYB0 399 aa10.96□□□□□ -0.65
AC004817.1-201ENST00000553621 C11orf95C9JLR9 678 aaPredicted RBP10.95□□□□□ -0.66
AC004817.1-201ENST00000553621 PPP1R1BQ9UD71 204 aaPredicted RBP10.95□□□□□ -0.66
AC004817.1-201ENST00000553621 ABCC6O95255 1503 aa10.94□□□□□ -0.66
AC004817.1-201ENST00000553621 PLSCR1O15162 318 aa10.94□□□□□ -0.66
AC004817.1-201ENST00000553621 ZBTB7AO95365 584 aa10.94□□□□□ -0.66
AC004817.1-201ENST00000553621 IL2RBP14784 551 aa10.94□□□□□ -0.66
AC004817.1-201ENST00000553621 TRIM26Q12899 539 aaPredicted RBP10.94□□□□□ -0.66
AC004817.1-201ENST00000553621 TXNRD1Q16881 649 aa10.94□□□□□ -0.66
AC004817.1-201ENST00000553621 USP54Q70EL1 1684 aa10.93□□□□□ -0.66
AC004817.1-201ENST00000553621 SPON1Q9HCB6 807 aa10.93□□□□□ -0.66
AC004817.1-201ENST00000553621 BCL9O00512 1426 aa10.92□□□□□ -0.66
AC004817.1-201ENST00000553621 USP47Q96K76 1375 aa10.92□□□□□ -0.66
AC004817.1-201ENST00000553621 MAP3K19Q56UN5 1328 aa10.92□□□□□ -0.66
AC004817.1-201ENST00000553621 DDX54Q8TDD1 881 aaKnown RBP10.92□□□□□ -0.66
AC004817.1-201ENST00000553621 COG3Q96JB2 828 aa10.92□□□□□ -0.66
AC004817.1-201ENST00000553621 LTN1O94822 1766 aa10.91□□□□□ -0.66
AC004817.1-201ENST00000553621 RRS1Q15050 365 aaKnown RBP10.91□□□□□ -0.66
AC004817.1-201ENST00000553621 IP6K1Q92551 441 aa10.91□□□□□ -0.66
AC004817.1-201ENST00000553621 GGNBP2Q9H3C7 697 aa10.91□□□□□ -0.66
AC004817.1-201ENST00000553621 STK32BQ9NY57 414 aa10.91□□□□□ -0.66
AC004817.1-201ENST00000553621 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
AC004817.1-201ENST00000553621 SBF2Q86WG5 1849 aa10.91□□□□□ -0.66
AC004817.1-201ENST00000553621 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.66
AC004817.1-201ENST00000553621 HOXC9P31274 260 aa10.9□□□□□ -0.66
AC004817.1-201ENST00000553621 AMPHP49418 695 aa10.9□□□□□ -0.66
AC004817.1-201ENST00000553621 USHBP1Q8N6Y0 703 aa10.9□□□□□ -0.66
AC004817.1-201ENST00000553621 PUS7Q96PZ0 661 aaKnown RBP10.9□□□□□ -0.66
AC004817.1-201ENST00000553621 NINLQ9Y2I6 1382 aa10.9□□□□□ -0.67
AC004817.1-201ENST00000553621 NHSQ6T4R5 1651 aa10.89□□□□□ -0.67
AC004817.1-201ENST00000553621 TMF1P82094 1093 aa10.89□□□□□ -0.67
AC004817.1-201ENST00000553621 SLC15A2Q16348 729 aa10.89□□□□□ -0.67
AC004817.1-201ENST00000553621 RGPD3A6NKT7 1758 aaPredicted RBP10.89□□□□□ -0.67
AC004817.1-201ENST00000553621 RGPD4Q7Z3J3 1758 aa10.89□□□□□ -0.67
AC004817.1-201ENST00000553621 CASZ1Q86V15 1759 aa10.88□□□□□ -0.67
AC004817.1-201ENST00000553621 KCNQ4P56696 695 aa10.88□□□□□ -0.67
AC004817.1-201ENST00000553621 ZNF827Q17R98 1081 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 269 ms