RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 RGPD1P0DJD0 1748 aa25.17■■□□□ 1.62
PNN-202ENST00000553331 CSB-PGBD3P0DP91 1061 aa25.16■■□□□ 1.62
PNN-202ENST00000553331 EDC4Q6P2E9 1401 aaKnown RBP25.15■■□□□ 1.62
PNN-202ENST00000553331 FAM196AQ6ZSG2 479 aa25.15■■□□□ 1.62
PNN-202ENST00000553331 NFAT5O94916 1531 aa25.15■■□□□ 1.62
PNN-202ENST00000553331 SLC24A1O60721 1099 aa25.14■■□□□ 1.62
PNN-202ENST00000553331 TRIM37O94972 964 aa25.14■■□□□ 1.62
PNN-202ENST00000553331 USP31Q70CQ4 1352 aa25.14■■□□□ 1.61
PNN-202ENST00000553331 TMF1P82094 1093 aa25.13■■□□□ 1.61
PNN-202ENST00000553331 EN1Q05925 392 aaPredicted RBP25.13■■□□□ 1.61
PNN-202ENST00000553331 WDR17Q8IZU2 1322 aa25.12■■□□□ 1.61
PNN-202ENST00000553331 CLSPNQ9HAW4 1339 aa25.12■■□□□ 1.61
PNN-202ENST00000553331 CCER1Q8TC90 406 aaPredicted RBP25.11■■□□□ 1.61
PNN-202ENST00000553331 TIMELESSQ9UNS1 1208 aa25.11■■□□□ 1.61
PNN-202ENST00000553331 PARP4Q9UKK3 1724 aaKnown RBP25.11■■□□□ 1.61
PNN-202ENST00000553331 NINLQ9Y2I6 1382 aa25.1■■□□□ 1.61
PNN-202ENST00000553331 TNS1Q9HBL0 1735 aaKnown RBP25.1■■□□□ 1.61
PNN-202ENST00000553331 LTN1O94822 1766 aa25.1■■□□□ 1.61
PNN-202ENST00000553331 USP54Q70EL1 1684 aa25.1■■□□□ 1.61
PNN-202ENST00000553331 APBA3O96018 575 aa25.06■■□□□ 1.6
PNN-202ENST00000553331 DDB1Q16531 1140 aa25.06■■□□□ 1.6
PNN-202ENST00000553331 WNK3Q9BYP7 1800 aa25.06■■□□□ 1.6
PNN-202ENST00000553331 CARD10Q9BWT7 1032 aa25.05■■□□□ 1.6
PNN-202ENST00000553331 LRRC37A3O60309 1634 aa25.04■■□□□ 1.6
PNN-202ENST00000553331 EZH2Q15910 746 aaKnown RBP25.04■■□□□ 1.6
PNN-202ENST00000553331 PSDA5PKW4 1024 aaPredicted RBP25.03■■□□□ 1.6
PNN-202ENST00000553331 COG3Q96JB2 828 aa25.03■■□□□ 1.6
PNN-202ENST00000553331 ANKRD36BQ8N2N9 1353 aa25.03■■□□□ 1.6
PNN-202ENST00000553331 OVOS2A0A0J9YW53 1432 aa25.03■■□□□ 1.6
PNN-202ENST00000553331 OVOS2Q6IE36 1432 aa25.03■■□□□ 1.6
PNN-202ENST00000553331 CDCA8Q53HL2 280 aa25.02■■□□□ 1.6
PNN-202ENST00000553331 NLRP2Q9NX02 1062 aa25.02■■□□□ 1.6
PNN-202ENST00000553331 ABCC6O95255 1503 aa25.02■■□□□ 1.6
PNN-202ENST00000553331 ANKRD24Q8TF21 1146 aa25■■□□□ 1.59
PNN-202ENST00000553331 CDCA7Q9BWT1 371 aaPredicted RBP25■■□□□ 1.59
PNN-202ENST00000553331 OVOS2A0A0G2JMS6 1433 aa24.99■■□□□ 1.59
PNN-202ENST00000553331 DISP2A7MBM2 1401 aa24.99■■□□□ 1.59
PNN-202ENST00000553331 CCDC7Q96M83 1385 aa24.98■■□□□ 1.59
PNN-202ENST00000553331 ERBB3P21860 1342 aa24.98■■□□□ 1.59
PNN-202ENST00000553331 FBLN1P23142 703 aa24.98■■□□□ 1.59
PNN-202ENST00000553331 LTV1Q96GA3 475 aaPredicted RBP24.98■■□□□ 1.59
PNN-202ENST00000553331 CAMKK2Q96RR4 588 aa24.98■■□□□ 1.59
PNN-202ENST00000553331 POLR3GLQ9BT43 218 aa24.97■■□□□ 1.59
PNN-202ENST00000553331 PEAK1Q9H792 1746 aa24.96■■□□□ 1.59
PNN-202ENST00000553331 EXOC5O00471 708 aa24.96■■□□□ 1.59
PNN-202ENST00000553331 MARCH10Q8NA82 808 aaPredicted RBP24.96■■□□□ 1.59
PNN-202ENST00000553331 GGNBP2Q9H3C7 697 aa24.96■■□□□ 1.59
PNN-202ENST00000553331 C11orf95C9JLR9 678 aaPredicted RBP24.95■■□□□ 1.58
PNN-202ENST00000553331 SBF2Q86WG5 1849 aa24.95■■□□□ 1.58
PNN-202ENST00000553331 AMPHP49418 695 aa24.94■■□□□ 1.58
PNN-202ENST00000553331 R3HDM1Q15032 1099 aaKnown RBP24.94■■□□□ 1.58
PNN-202ENST00000553331 IP6K1Q92551 441 aa24.94■■□□□ 1.58
PNN-202ENST00000553331 FYB1O15117 783 aa24.93■■□□□ 1.58
PNN-202ENST00000553331 MAP3K19Q56UN5 1328 aa24.92■■□□□ 1.58
PNN-202ENST00000553331 MYOM1P52179 1685 aa24.91■■□□□ 1.58
PNN-202ENST00000553331 KIF20BQ96Q89 1820 aa24.91■■□□□ 1.58
PNN-202ENST00000553331 IL2RBP14784 551 aa24.9■■□□□ 1.58
PNN-202ENST00000553331 RRS1Q15050 365 aaKnown RBP24.9■■□□□ 1.58
PNN-202ENST00000553331 PTF1AQ7RTS3 328 aa24.9■■□□□ 1.58
PNN-202ENST00000553331 PARD3Q8TEW0 1356 aa24.9■■□□□ 1.58
PNN-202ENST00000553331 HOXC9P31274 260 aa24.89■■□□□ 1.58
PNN-202ENST00000553331 EIF4G2P78344 907 aaKnown RBP eCLIP24.88■■□□□ 1.57
PNN-202ENST00000553331 CARD14Q9BXL6 1004 aa24.88■■□□□ 1.57
PNN-202ENST00000553331 RREB1Q92766 1687 aa24.88■■□□□ 1.57
PNN-202ENST00000553331 TNS2Q63HR2 1409 aa24.87■■□□□ 1.57
PNN-202ENST00000553331 NSD3Q9BZ95 1437 aa24.87■■□□□ 1.57
PNN-202ENST00000553331 HSPA5P11021 654 aaKnown RBP24.87■■□□□ 1.57
PNN-202ENST00000553331 BCL11BQ9C0K0 894 aaPredicted RBP24.87■■□□□ 1.57
PNN-202ENST00000553331 NUP188Q5SRE5 1749 aa24.86■■□□□ 1.57
PNN-202ENST00000553331 RGPD2P0DJD1 1756 aa24.85■■□□□ 1.57
PNN-202ENST00000553331 FAM208AQ9UK61 1670 aaKnown RBP24.85■■□□□ 1.57
PNN-202ENST00000553331 NBPF14Q5TI25 921 aa24.84■■□□□ 1.57
PNN-202ENST00000553331 ACSBG1Q96GR2 724 aa24.84■■□□□ 1.57
PNN-202ENST00000553331 KAT6BQ8WYB5 2073 aa24.82■■□□□ 1.56
PNN-202ENST00000553331 BCL9O00512 1426 aa24.8■■□□□ 1.56
PNN-202ENST00000553331 KCNQ2O43526 872 aa24.8■■□□□ 1.56
PNN-202ENST00000553331 DDX54Q8TDD1 881 aaKnown RBP24.8■■□□□ 1.56
PNN-202ENST00000553331 RTL1A6NKG5 1358 aa24.8■■□□□ 1.56
PNN-202ENST00000553331 PLSCR1O15162 318 aa24.79■■□□□ 1.56
PNN-202ENST00000553331 LRP5O75197 1615 aa24.79■■□□□ 1.56
PNN-202ENST00000553331 USHBP1Q8N6Y0 703 aa24.78■■□□□ 1.56
PNN-202ENST00000553331 RGPD3A6NKT7 1758 aaPredicted RBP24.77■■□□□ 1.56
PNN-202ENST00000553331 RGPD4Q7Z3J3 1758 aa24.77■■□□□ 1.56
PNN-202ENST00000553331 SMG6Q86US8 1419 aaKnown RBP24.77■■□□□ 1.56
PNN-202ENST00000553331 PPM1GO15355 546 aaPredicted RBP24.76■■□□□ 1.55
PNN-202ENST00000553331 HSP90AB2PQ58FF8 381 aa24.76■■□□□ 1.55
PNN-202ENST00000553331 NBPF6Q5VWK0 638 aa24.75■■□□□ 1.55
PNN-202ENST00000553331 NBPF4Q96M43 638 aa24.75■■□□□ 1.55
PNN-202ENST00000553331 CGNL1Q0VF96 1302 aa24.75■■□□□ 1.55
PNN-202ENST00000553331 NHSQ6T4R5 1651 aa24.75■■□□□ 1.55
PNN-202ENST00000553331 EMILIN1Q9Y6C2 1016 aa24.74■■□□□ 1.55
PNN-202ENST00000553331 SRCAPQ6ZRS2 3230 aa24.74■■□□□ 1.55
PNN-202ENST00000553331 FLT4P35916 1363 aa24.73■■□□□ 1.55
PNN-202ENST00000553331 PROM2Q8N271 834 aa24.73■■□□□ 1.55
PNN-202ENST00000553331 MEGF6O75095 1541 aa24.71■■□□□ 1.55
PNN-202ENST00000553331 INSRP06213 1382 aa24.71■■□□□ 1.55
PNN-202ENST00000553331 TNNT2P45379 298 aaPredicted RBP24.71■■□□□ 1.55
PNN-202ENST00000553331 TXNRD1Q16881 649 aa24.71■■□□□ 1.55
PNN-202ENST00000553331 ZCRB1Q8TBF4 217 aaKnown RBP24.71■■□□□ 1.55
PNN-202ENST00000553331 PANK3Q9H999 370 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms