RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 NR1H3Q13133 447 aa10.29□□□□□ -0.76
ATXN3-217ENST00000553287 MCM6Q14566 821 aa10.29□□□□□ -0.76
ATXN3-217ENST00000553287 GDPD2Q9HCC8 539 aa10.29□□□□□ -0.76
ATXN3-217ENST00000553287 ATP13A2Q9NQ11 1180 aa10.29□□□□□ -0.76
ATXN3-217ENST00000553287 ZIC2O95409 532 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-217ENST00000553287 TIMP2P16035 220 aa10.28□□□□□ -0.76
ATXN3-217ENST00000553287 PCDHB9Q9Y5E1 797 aa10.28□□□□□ -0.76
ATXN3-217ENST00000553287 CCDC116Q8IYX3 515 aa10.27□□□□□ -0.77
ATXN3-217ENST00000553287 ITPKCQ96DU7 683 aa10.27□□□□□ -0.77
ATXN3-217ENST00000553287 ZFAND3Q9H8U3 227 aa10.27□□□□□ -0.77
ATXN3-217ENST00000553287 GMPR2Q9P2T1 348 aaKnown RBP10.27□□□□□ -0.77
ATXN3-217ENST00000553287 NBPF20Q3BBV1 942 aa10.26□□□□□ -0.77
ATXN3-217ENST00000553287 EMILIN1Q9Y6C2 1016 aa10.26□□□□□ -0.77
ATXN3-217ENST00000553287 ABL2P42684 1182 aa10.25□□□□□ -0.77
ATXN3-217ENST00000553287 RAB15P59190 212 aa10.25□□□□□ -0.77
ATXN3-217ENST00000553287 INTS6LQ5JSJ4 861 aaKnown RBP10.25□□□□□ -0.77
ATXN3-217ENST00000553287 PPP1R26Q5T8A7 1209 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-217ENST00000553287 ZNF330Q9Y3S2 320 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-217ENST00000553287 DHX9Q08211 1270 aaKnown RBP10.24□□□□□ -0.77
ATXN3-217ENST00000553287 FLIIQ13045 1269 aa10.24□□□□□ -0.77
ATXN3-217ENST00000553287 IRF5Q13568 498 aa10.24□□□□□ -0.77
ATXN3-217ENST00000553287 C11orf95C9JLR9 678 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-217ENST00000553287 GIGYF1O75420 1035 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-217ENST00000553287 BMP1P13497 986 aa10.23□□□□□ -0.77
ATXN3-217ENST00000553287 MCCD1P59942 119 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-217ENST00000553287 TRIM46Q7Z4K8 759 aa10.23□□□□□ -0.77
ATXN3-217ENST00000553287 PGPEP1Q9NXJ5 209 aa10.23□□□□□ -0.77
ATXN3-217ENST00000553287 ESPNB1AK53 854 aa10.22□□□□□ -0.77
ATXN3-217ENST00000553287 SENP2Q9HC62 589 aa10.22□□□□□ -0.77
ATXN3-217ENST00000553287 MRPL14Q6P1L8 145 aaKnown RBP10.21□□□□□ -0.77
ATXN3-217ENST00000553287 COG6Q9Y2V7 657 aa10.21□□□□□ -0.77
ATXN3-217ENST00000553287 ERVH48-1M5A8F1 160 aa10.2□□□□□ -0.78
ATXN3-217ENST00000553287 ZNF592Q92610 1267 aa10.2□□□□□ -0.78
ATXN3-217ENST00000553287 TMPRSS4Q9NRS4 437 aa10.2□□□□□ -0.78
ATXN3-217ENST00000553287 VAC14Q08AM6 782 aa10.19□□□□□ -0.78
ATXN3-217ENST00000553287 SCARF1Q14162 830 aa10.19□□□□□ -0.78
ATXN3-217ENST00000553287 SEPT12Q8IYM1 358 aa10.19□□□□□ -0.78
ATXN3-217ENST00000553287 POM121Q96HA1 1249 aa10.19□□□□□ -0.78
ATXN3-217ENST00000553287 RAD21O60216 631 aa10.18□□□□□ -0.78
ATXN3-217ENST00000553287 SNRPBP14678 240 aaKnown RBP10.18□□□□□ -0.78
ATXN3-217ENST00000553287 UBTFP17480 764 aaKnown RBP10.18□□□□□ -0.78
ATXN3-217ENST00000553287 EIF4G2P78344 907 aaKnown RBP eCLIP10.18□□□□□ -0.78
ATXN3-217ENST00000553287 CBLBQ13191 982 aa10.18□□□□□ -0.78
ATXN3-217ENST00000553287 WASHC4Q2M389 1173 aa10.18□□□□□ -0.78
ATXN3-217ENST00000553287 KIFC2Q96AC6 838 aa10.18□□□□□ -0.78
ATXN3-217ENST00000553287 TRIM47Q96LD4 638 aa10.18□□□□□ -0.78
ATXN3-217ENST00000553287 ZFP42Q96MM3 310 aa10.18□□□□□ -0.78
ATXN3-217ENST00000553287 RNF20Q5VTR2 975 aa10.17□□□□□ -0.78
ATXN3-217ENST00000553287 PURBQ96QR8 312 aaKnown RBP10.17□□□□□ -0.78
ATXN3-217ENST00000553287 CEP126Q9P2H0 1117 aa10.17□□□□□ -0.78
ATXN3-217ENST00000553287 UPP2O95045 317 aa10.16□□□□□ -0.78
ATXN3-217ENST00000553287 C6orf118Q5T5N4 469 aa10.16□□□□□ -0.78
ATXN3-217ENST00000553287 MEIOBQ8N635 442 aa10.16□□□□□ -0.78
ATXN3-217ENST00000553287 BMP2P12643 396 aa10.15□□□□□ -0.78
ATXN3-217ENST00000553287 Q6ZVU0 165 aa10.15□□□□□ -0.78
ATXN3-217ENST00000553287 ZNF784Q8NCA9 323 aaPredicted RBP10.15□□□□□ -0.78
ATXN3-217ENST00000553287 TSEN34Q9BSV6 310 aaKnown RBP10.15□□□□□ -0.78
ATXN3-217ENST00000553287 ADD1P35611 737 aaKnown RBP10.14□□□□□ -0.79
ATXN3-217ENST00000553287 CCDC125Q86Z20 511 aa10.14□□□□□ -0.79
ATXN3-217ENST00000553287 WWC1Q8IX03 1113 aa10.14□□□□□ -0.79
ATXN3-217ENST00000553287 LILRA1O75019 489 aa10.13□□□□□ -0.79
ATXN3-217ENST00000553287 LINC00528Q8N1L1 170 aa10.13□□□□□ -0.79
ATXN3-217ENST00000553287 TRIM52Q96A61 297 aa10.13□□□□□ -0.79
ATXN3-217ENST00000553287 AGBL1Q96MI9 1066 aa10.12□□□□□ -0.79
ATXN3-217ENST00000553287 CYLDQ9NQC7 956 aa10.12□□□□□ -0.79
ATXN3-217ENST00000553287 SEMA3FQ13275 785 aa10.11□□□□□ -0.79
ATXN3-217ENST00000553287 ZNF775Q96BV0 537 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-217ENST00000553287 PCDHB11Q9Y5F2 797 aa10.11□□□□□ -0.79
ATXN3-217ENST00000553287 RELBQ01201 579 aa10.09□□□□□ -0.79
ATXN3-217ENST00000553287 SLFNL1Q499Z3 407 aa10.09□□□□□ -0.79
ATXN3-217ENST00000553287 SOX11P35716 441 aa10.08□□□□□ -0.8
ATXN3-217ENST00000553287 TSGA10IPQ3SY00 556 aa10.08□□□□□ -0.8
ATXN3-217ENST00000553287 PHTF2Q8N3S3 785 aa10.08□□□□□ -0.8
ATXN3-217ENST00000553287 CLUAP1Q96AJ1 413 aa10.08□□□□□ -0.8
ATXN3-217ENST00000553287 ESF1Q9H501 851 aaKnown RBP10.08□□□□□ -0.8
ATXN3-217ENST00000553287 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-217ENST00000553287 ADH1AP07327 375 aa10.07□□□□□ -0.8
ATXN3-217ENST00000553287 CC2D2BQ6DHV5 1058 aa10.07□□□□□ -0.8
ATXN3-217ENST00000553287 CCDC85AQ96PX6 553 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-217ENST00000553287 SPINT1O43278 529 aa10.06□□□□□ -0.8
ATXN3-217ENST00000553287 PTGIRP43119 386 aa10.06□□□□□ -0.8
ATXN3-217ENST00000553287 ERVK-9P63128 1117 aa10.06□□□□□ -0.8
ATXN3-217ENST00000553287 RNF135Q8IUD6 432 aa10.06□□□□□ -0.8
ATXN3-217ENST00000553287 SOS2Q07890 1332 aaPredicted RBP10.06□□□□□ -0.8
ATXN3-217ENST00000553287 SOBPA7XYQ1 873 aa10.05□□□□□ -0.8
ATXN3-217ENST00000553287 MAN1A2O60476 641 aa10.05□□□□□ -0.8
ATXN3-217ENST00000553287 SCTRP47872 440 aa10.05□□□□□ -0.8
ATXN3-217ENST00000553287 KDF1Q8NAX2 398 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-217ENST00000553287 CDCA7Q9BWT1 371 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-217ENST00000553287 INSM2Q96T92 566 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-217ENST00000553287 ALG2Q9H553 416 aa10.04□□□□□ -0.8
ATXN3-217ENST00000553287 FIGNL2A6NMB9 653 aa10.03□□□□□ -0.8
ATXN3-217ENST00000553287 TTLL8A6PVC2 850 aa10.03□□□□□ -0.8
ATXN3-217ENST00000553287 ATP5J2-PTCD1G3V325 749 aa10.03□□□□□ -0.8
ATXN3-217ENST00000553287 POM121CA8CG34 1229 aa10.02□□□□□ -0.81
ATXN3-217ENST00000553287 CTSOP43234 321 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-217ENST00000553287 DOLKQ9UPQ8 538 aa10.02□□□□□ -0.81
ATXN3-217ENST00000553287 MYCP01106 439 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-217ENST00000553287 USP4Q13107 963 aa10.01□□□□□ -0.81
ATXN3-217ENST00000553287 HDGFL1Q5TGJ6 251 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms