RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 LRCH3Q96II8 777 aa9.17□□□□□ -0.94
SCFD1-208ENST00000553278 IGSF5Q9NSI5 407 aa9.17□□□□□ -0.94
SCFD1-208ENST00000553278 PBX2P40425 430 aa9.16□□□□□ -0.94
SCFD1-208ENST00000553278 SERPINB4P48594 390 aa9.16□□□□□ -0.94
SCFD1-208ENST00000553278 PHTF2Q8N3S3 785 aa9.16□□□□□ -0.94
SCFD1-208ENST00000553278 ERBB3P21860 1342 aa9.15□□□□□ -0.94
SCFD1-208ENST00000553278 ZNF16P17020 682 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-208ENST00000553278 NBPF14Q5TI25 921 aa9.15□□□□□ -0.94
SCFD1-208ENST00000553278 C1orf216Q8TAB5 229 aa9.15□□□□□ -0.94
SCFD1-208ENST00000553278 DNAAF2Q9NVR5 837 aaKnown RBP9.15□□□□□ -0.94
SCFD1-208ENST00000553278 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-208ENST00000553278 KIAA1522Q9P206 1035 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-208ENST00000553278 NOD1Q9Y239 953 aa9.15□□□□□ -0.94
SCFD1-208ENST00000553278 NR1I2O75469 434 aa9.14□□□□□ -0.95
SCFD1-208ENST00000553278 ZNF594Q96JF6 807 aaPredicted RBP9.14□□□□□ -0.95
SCFD1-208ENST00000553278 CHIC2Q9UKJ5 165 aa9.14□□□□□ -0.95
SCFD1-208ENST00000553278 RBM19Q9Y4C8 960 aaKnown RBP9.14□□□□□ -0.95
SCFD1-208ENST00000553278 CCNYL3P0C7X3 344 aa9.13□□□□□ -0.95
SCFD1-208ENST00000553278 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
SCFD1-208ENST00000553278 LARGE2Q8N3Y3 721 aa9.13□□□□□ -0.95
SCFD1-208ENST00000553278 MRPL50Q8N5N7 158 aaKnown RBP9.13□□□□□ -0.95
SCFD1-208ENST00000553278 GIPC2Q8TF65 315 aa9.13□□□□□ -0.95
SCFD1-208ENST00000553278 AXIN2Q9Y2T1 843 aa9.13□□□□□ -0.95
SCFD1-208ENST00000553278 ZNF326Q5BKZ1 582 aaKnown RBP9.12□□□□□ -0.95
SCFD1-208ENST00000553278 VARS2Q5ST30 1063 aaKnown RBP9.12□□□□□ -0.95
SCFD1-208ENST00000553278 POTEEQ6S8J3 1075 aa9.12□□□□□ -0.95
SCFD1-208ENST00000553278 SCUBE3Q8IX30 993 aa9.12□□□□□ -0.95
SCFD1-208ENST00000553278 EGFL7Q9UHF1 273 aa9.12□□□□□ -0.95
SCFD1-208ENST00000553278 BHMG1C9JSJ3 638 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-208ENST00000553278 CLDN10P78369 228 aa9.11□□□□□ -0.95
SCFD1-208ENST00000553278 TRAF7Q6Q0C0 670 aa9.11□□□□□ -0.95
SCFD1-208ENST00000553278 THAP11Q96EK4 314 aa9.11□□□□□ -0.95
SCFD1-208ENST00000553278 ARHGAP9Q9BRR9 750 aa9.11□□□□□ -0.95
SCFD1-208ENST00000553278 EVA1BQ9NVM1 165 aa9.11□□□□□ -0.95
SCFD1-208ENST00000553278 ANKRD33BA6NCL7 494 aa9.1□□□□□ -0.95
SCFD1-208ENST00000553278 NOM1Q5C9Z4 860 aaKnown RBP9.1□□□□□ -0.95
SCFD1-208ENST00000553278 ZBTB33Q86T24 672 aa9.1□□□□□ -0.95
SCFD1-208ENST00000553278 ADAM32Q8TC27 787 aa9.1□□□□□ -0.95
SCFD1-208ENST00000553278 PCDHB3Q9Y5E6 796 aa9.1□□□□□ -0.95
SCFD1-208ENST00000553278 PRMT3O60678 531 aa9.09□□□□□ -0.95
SCFD1-208ENST00000553278 ABL1P00519 1130 aa9.09□□□□□ -0.95
SCFD1-208ENST00000553278 SEC13P55735 322 aa9.09□□□□□ -0.95
SCFD1-208ENST00000553278 PPP4CP60510 307 aa9.09□□□□□ -0.95
SCFD1-208ENST00000553278 SIX5Q8N196 739 aa9.09□□□□□ -0.95
SCFD1-208ENST00000553278 NUDT12Q9BQG2 462 aa9.09□□□□□ -0.95
SCFD1-208ENST00000553278 OCSTAMPQ9BR26 566 aa9.09□□□□□ -0.95
SCFD1-208ENST00000553278 DOLKQ9UPQ8 538 aa9.09□□□□□ -0.95
SCFD1-208ENST00000553278 TCF3P15923 654 aa9.08□□□□□ -0.96
SCFD1-208ENST00000553278 MSS51Q4VC12 460 aa9.08□□□□□ -0.96
SCFD1-208ENST00000553278 DZIP3Q86Y13 1208 aaKnown RBP9.08□□□□□ -0.96
SCFD1-208ENST00000553278 NPAS4Q8IUM7 802 aa9.08□□□□□ -0.96
SCFD1-208ENST00000553278 BCL11AQ9H165 835 aa9.08□□□□□ -0.96
SCFD1-208ENST00000553278 CXXC1Q9P0U4 656 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-208ENST00000553278 TK2O00142 265 aa9.07□□□□□ -0.96
SCFD1-208ENST00000553278 DXOO77932 396 aaKnown RBP9.07□□□□□ -0.96
SCFD1-208ENST00000553278 SCNN1AP37088 669 aa9.07□□□□□ -0.96
SCFD1-208ENST00000553278 H3BRB1 525 aa9.06□□□□□ -0.96
SCFD1-208ENST00000553278 GTF2IP78347 998 aa9.06□□□□□ -0.96
SCFD1-208ENST00000553278 OXLD1Q5BKU9 147 aa9.06□□□□□ -0.96
SCFD1-208ENST00000553278 TAS1R3Q7RTX0 852 aa9.06□□□□□ -0.96
SCFD1-208ENST00000553278 GLYCTKQ8IVS8 523 aa9.06□□□□□ -0.96
SCFD1-208ENST00000553278 TUT1Q9H6E5 874 aaKnown RBP9.06□□□□□ -0.96
SCFD1-208ENST00000553278 ZBTB7BO15156 539 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-208ENST00000553278 ICMTO60725 284 aa9.05□□□□□ -0.96
SCFD1-208ENST00000553278 APLP1P51693 650 aa9.05□□□□□ -0.96
SCFD1-208ENST00000553278 CCDC102BQ68D86 513 aa9.05□□□□□ -0.96
SCFD1-208ENST00000553278 ANKK1Q8NFD2 765 aa9.05□□□□□ -0.96
SCFD1-208ENST00000553278 PRIMPOLQ96LW4 560 aa9.05□□□□□ -0.96
SCFD1-208ENST00000553278 DKK1O94907 266 aa9.04□□□□□ -0.96
SCFD1-208ENST00000553278 HMGB1P09429 215 aaKnown RBP9.04□□□□□ -0.96
SCFD1-208ENST00000553278 VAMP1P23763 118 aa9.04□□□□□ -0.96
SCFD1-208ENST00000553278 ZNF211Q13398 564 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-208ENST00000553278 OCLNQ16625 522 aa9.04□□□□□ -0.96
SCFD1-208ENST00000553278 TSGA10IPQ3SY00 556 aa9.04□□□□□ -0.96
SCFD1-208ENST00000553278 RNF20Q5VTR2 975 aa9.04□□□□□ -0.96
SCFD1-208ENST00000553278 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-208ENST00000553278 KIAA1024Q9UPX6 916 aa9.04□□□□□ -0.96
SCFD1-208ENST00000553278 HPS5Q9UPZ3 1129 aa9.04□□□□□ -0.96
SCFD1-208ENST00000553278 GOLGA8CPA6NN73 597 aa9.03□□□□□ -0.96
SCFD1-208ENST00000553278 MAPK1P28482 360 aa9.03□□□□□ -0.96
SCFD1-208ENST00000553278 MMP16P51512 607 aa9.03□□□□□ -0.96
SCFD1-208ENST00000553278 PSME1Q06323 249 aa9.03□□□□□ -0.96
SCFD1-208ENST00000553278 ZSCAN29Q8IWY8 852 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-208ENST00000553278 C21orf2O43822 256 aa9.02□□□□□ -0.97
SCFD1-208ENST00000553278 SH3BP5LQ7L8J4 393 aa9.02□□□□□ -0.97
SCFD1-208ENST00000553278 ZNF687Q8N1G0 1237 aa9.02□□□□□ -0.97
SCFD1-208ENST00000553278 TPCN2Q8NHX9 752 aa9.02□□□□□ -0.97
SCFD1-208ENST00000553278 SPSB2Q99619 263 aa9.02□□□□□ -0.97
SCFD1-208ENST00000553278 HINFPQ9BQA5 517 aa9.02□□□□□ -0.97
SCFD1-208ENST00000553278 ANO2Q9NQ90 1003 aa9.02□□□□□ -0.97
SCFD1-208ENST00000553278 TSR3Q9UJK0 312 aaKnown RBP9.02□□□□□ -0.97
SCFD1-208ENST00000553278 SOWAHBA6NEL2 793 aa9.01□□□□□ -0.97
SCFD1-208ENST00000553278 SFI1A8K8P3 1242 aa9.01□□□□□ -0.97
SCFD1-208ENST00000553278 FAM160A2Q8N612 972 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-208ENST00000553278 STAC3Q96MF2 364 aa9.01□□□□□ -0.97
SCFD1-208ENST00000553278 ASB16Q96NS5 453 aa9.01□□□□□ -0.97
SCFD1-208ENST00000553278 CARD14Q9BXL6 1004 aa9.01□□□□□ -0.97
SCFD1-208ENST00000553278 DCTN4Q9UJW0 460 aa9.01□□□□□ -0.97
SCFD1-208ENST00000553278 SF3B2Q13435 895 aaKnown RBP9□□□□□ -0.97
SCFD1-208ENST00000553278 GTF3C2Q8WUA4 911 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms