RNA–Protein interactions for RNA: ENST00000552931.1

SMARCC2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-215ENST00000552931 LMOD2Q6P5Q4 547 aa8.62□□□□□ -1.03
SMARCC2-215ENST00000552931 ARHGEF25Q86VW2 580 aa8.62□□□□□ -1.03
SMARCC2-215ENST00000552931 IFNLR1Q8IU57 520 aaPredicted RBP8.62□□□□□ -1.03
SMARCC2-215ENST00000552931 TESK2Q96S53 571 aa8.62□□□□□ -1.03
SMARCC2-215ENST00000552931 TONSLQ96HA7 1378 aa8.61□□□□□ -1.03
SMARCC2-215ENST00000552931 BRWD3Q6RI45 1802 aa8.61□□□□□ -1.03
SMARCC2-215ENST00000552931 AKAP12Q02952 1782 aa8.61□□□□□ -1.03
SMARCC2-215ENST00000552931 NEUROD1Q13562 356 aa8.61□□□□□ -1.03
SMARCC2-215ENST00000552931 CARD11Q9BXL7 1154 aa8.61□□□□□ -1.03
SMARCC2-215ENST00000552931 CD163L1Q9NR16 1453 aa8.61□□□□□ -1.03
SMARCC2-215ENST00000552931 COL18A1P39060 1754 aa8.61□□□□□ -1.03
SMARCC2-215ENST00000552931 PARD3Q8TEW0 1356 aa8.61□□□□□ -1.03
SMARCC2-215ENST00000552931 COL5A2P05997 1499 aaPredicted RBP8.6□□□□□ -1.03
SMARCC2-215ENST00000552931 TMEM132AQ24JP5 1023 aa8.6□□□□□ -1.03
SMARCC2-215ENST00000552931 FAM196AQ6ZSG2 479 aa8.6□□□□□ -1.03
SMARCC2-215ENST00000552931 DEFB132Q7Z7B7 95 aa8.6□□□□□ -1.03
SMARCC2-215ENST00000552931 TCP11L2Q8N4U5 519 aa8.6□□□□□ -1.03
SMARCC2-215ENST00000552931 CDCA7Q9BWT1 371 aaPredicted RBP8.6□□□□□ -1.03
SMARCC2-215ENST00000552931 BAG6P46379 1132 aa8.59□□□□□ -1.03
SMARCC2-215ENST00000552931 NLRP6P59044 892 aa8.59□□□□□ -1.03
SMARCC2-215ENST00000552931 NBR1Q14596 966 aa8.59□□□□□ -1.03
SMARCC2-215ENST00000552931 FAM98CQ17RN3 349 aaKnown RBP8.59□□□□□ -1.03
SMARCC2-215ENST00000552931 TSHZ2Q9NRE2 1034 aa8.59□□□□□ -1.03
SMARCC2-215ENST00000552931 CRB1P82279 1406 aa8.59□□□□□ -1.03
SMARCC2-215ENST00000552931 EDC4Q6P2E9 1401 aaKnown RBP8.59□□□□□ -1.03
SMARCC2-215ENST00000552931 PIK3C2AO00443 1686 aa8.59□□□□□ -1.03
SMARCC2-215ENST00000552931 MON2Q7Z3U7 1717 aa8.58□□□□□ -1.04
SMARCC2-215ENST00000552931 ZC3H6P61129 1189 aaKnown RBP8.58□□□□□ -1.04
SMARCC2-215ENST00000552931 NFAT5O94916 1531 aa8.58□□□□□ -1.04
SMARCC2-215ENST00000552931 WDR17Q8IZU2 1322 aa8.57□□□□□ -1.04
SMARCC2-215ENST00000552931 YY1P25490 414 aa8.57□□□□□ -1.04
SMARCC2-215ENST00000552931 CARD10Q9BWT7 1032 aa8.57□□□□□ -1.04
SMARCC2-215ENST00000552931 TERF2IPQ9NYB0 399 aa8.57□□□□□ -1.04
SMARCC2-215ENST00000552931 KTN1Q86UP2 1357 aaKnown RBP8.57□□□□□ -1.04
SMARCC2-215ENST00000552931 PARP4Q9UKK3 1724 aaKnown RBP8.57□□□□□ -1.04
SMARCC2-215ENST00000552931 PSDA5PKW4 1024 aaPredicted RBP8.56□□□□□ -1.04
SMARCC2-215ENST00000552931 EVA1CP58658 441 aa8.56□□□□□ -1.04
SMARCC2-215ENST00000552931 CHRNA2Q15822 529 aa8.56□□□□□ -1.04
SMARCC2-215ENST00000552931 CDCA8Q53HL2 280 aa8.56□□□□□ -1.04
SMARCC2-215ENST00000552931 LARP1Q6PKG0 1096 aaKnown RBP8.56□□□□□ -1.04
SMARCC2-215ENST00000552931 CCDC9Q9Y3X0 531 aaKnown RBP8.56□□□□□ -1.04
SMARCC2-215ENST00000552931 OVOS2A0A0J9YW53 1432 aa8.55□□□□□ -1.04
SMARCC2-215ENST00000552931 OVOS2Q6IE36 1432 aa8.55□□□□□ -1.04
SMARCC2-215ENST00000552931 RGPD1P0DJD0 1748 aa8.55□□□□□ -1.04
SMARCC2-215ENST00000552931 ST20-MTHFSA0A0A6YYL1 179 aa8.55□□□□□ -1.04
SMARCC2-215ENST00000552931 PLSCR1O15162 318 aa8.55□□□□□ -1.04
SMARCC2-215ENST00000552931 HDGFL2Q7Z4V5 671 aaPredicted RBP8.55□□□□□ -1.04
SMARCC2-215ENST00000552931 CAMKK2Q96RR4 588 aa8.55□□□□□ -1.04
SMARCC2-215ENST00000552931 AXIN2Q9Y2T1 843 aa8.55□□□□□ -1.04
SMARCC2-215ENST00000552931 CCDC7Q96M83 1385 aa8.55□□□□□ -1.04
SMARCC2-215ENST00000552931 A0A1W2PP64 1363 aa8.54□□□□□ -1.04
SMARCC2-215ENST00000552931 KIF24Q5T7B8 1368 aa8.54□□□□□ -1.04
SMARCC2-215ENST00000552931 ANKRD36BQ8N2N9 1353 aa8.54□□□□□ -1.04
SMARCC2-215ENST00000552931 DCAF8L1A6NGE4 600 aa8.54□□□□□ -1.04
SMARCC2-215ENST00000552931 NUTM2GQ5VZR2 741 aa8.54□□□□□ -1.04
SMARCC2-215ENST00000552931 SLC12A5Q9H2X9 1139 aa8.54□□□□□ -1.04
SMARCC2-215ENST00000552931 PEAK1Q9H792 1746 aa8.54□□□□□ -1.04
SMARCC2-215ENST00000552931 SPDYE4A6NLX3 237 aa8.53□□□□□ -1.04
SMARCC2-215ENST00000552931 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
SMARCC2-215ENST00000552931 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
SMARCC2-215ENST00000552931 ERBB3P21860 1342 aa8.53□□□□□ -1.04
SMARCC2-215ENST00000552931 TNS1Q9HBL0 1735 aaKnown RBP8.52□□□□□ -1.05
SMARCC2-215ENST00000552931 TMF1P82094 1093 aa8.52□□□□□ -1.05
SMARCC2-215ENST00000552931 PDE3BQ13370 1112 aa8.52□□□□□ -1.05
SMARCC2-215ENST00000552931 SPRYD3Q8NCJ5 442 aa8.52□□□□□ -1.05
SMARCC2-215ENST00000552931 IP6K1Q92551 441 aa8.52□□□□□ -1.05
SMARCC2-215ENST00000552931 STRN4Q9NRL3 753 aa8.52□□□□□ -1.05
SMARCC2-215ENST00000552931 OVOS2A0A0G2JMS6 1433 aa8.52□□□□□ -1.05
SMARCC2-215ENST00000552931 USP47Q96K76 1375 aa8.51□□□□□ -1.05
SMARCC2-215ENST00000552931 R3HDM1Q15032 1099 aaKnown RBP8.51□□□□□ -1.05
SMARCC2-215ENST00000552931 IFFO2Q5TF58 517 aa8.51□□□□□ -1.05
SMARCC2-215ENST00000552931 RTL1A6NKG5 1358 aa8.5□□□□□ -1.05
SMARCC2-215ENST00000552931 PLEKHG2Q9H7P9 1386 aa8.5□□□□□ -1.05
SMARCC2-215ENST00000552931 DDB1Q16531 1140 aa8.5□□□□□ -1.05
SMARCC2-215ENST00000552931 BCL11BQ9C0K0 894 aaPredicted RBP8.5□□□□□ -1.05
SMARCC2-215ENST00000552931 FYB1O15117 783 aa8.49□□□□□ -1.05
SMARCC2-215ENST00000552931 EN1Q05925 392 aaPredicted RBP8.49□□□□□ -1.05
SMARCC2-215ENST00000552931 TOM1L2Q6ZVM7 507 aa8.49□□□□□ -1.05
SMARCC2-215ENST00000552931 NME9Q86XW9 330 aa8.49□□□□□ -1.05
SMARCC2-215ENST00000552931 WNK3Q9BYP7 1800 aa8.49□□□□□ -1.05
SMARCC2-215ENST00000552931 CGNL1Q0VF96 1302 aa8.49□□□□□ -1.05
SMARCC2-215ENST00000552931 TNS2Q63HR2 1409 aa8.48□□□□□ -1.05
SMARCC2-215ENST00000552931 LRRC37A3O60309 1634 aa8.48□□□□□ -1.05
SMARCC2-215ENST00000552931 SBF2Q86WG5 1849 aa8.48□□□□□ -1.05
SMARCC2-215ENST00000552931 EXOC5O00471 708 aa8.48□□□□□ -1.05
SMARCC2-215ENST00000552931 TRIM37O94972 964 aa8.48□□□□□ -1.05
SMARCC2-215ENST00000552931 PROM2Q8N271 834 aa8.48□□□□□ -1.05
SMARCC2-215ENST00000552931 TMC1Q8TDI8 760 aa8.48□□□□□ -1.05
SMARCC2-215ENST00000552931 RREB1Q92766 1687 aa8.48□□□□□ -1.05
SMARCC2-215ENST00000552931 FAM208AQ9UK61 1670 aaKnown RBP8.48□□□□□ -1.05
SMARCC2-215ENST00000552931 A0A0G2JS52 829 aa8.47□□□□□ -1.05
SMARCC2-215ENST00000552931 ECM2O94769 699 aaPredicted RBP8.47□□□□□ -1.05
SMARCC2-215ENST00000552931 MYT1Q01538 1121 aa8.47□□□□□ -1.05
SMARCC2-215ENST00000552931 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMARCC2-215ENST00000552931 MARCH10Q8NA82 808 aaPredicted RBP8.47□□□□□ -1.05
SMARCC2-215ENST00000552931 COG3Q96JB2 828 aa8.47□□□□□ -1.05
SMARCC2-215ENST00000552931 USP35Q9P2H5 1018 aa8.47□□□□□ -1.05
SMARCC2-215ENST00000552931 NCAPD2Q15021 1401 aa8.46□□□□□ -1.05
SMARCC2-215ENST00000552931 RGPD5Q99666 1765 aa8.46□□□□□ -1.05
SMARCC2-215ENST00000552931 PLEKHG5O94827 1062 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms