RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 BRWD3Q6RI45 1802 aa23.28■■□□□ 1.32
BRF1-219ENST00000551787 FBLN1P23142 703 aa23.26■■□□□ 1.31
BRF1-219ENST00000551787 COG3Q96JB2 828 aa23.26■■□□□ 1.31
BRF1-219ENST00000551787 NFAT5O94916 1531 aa23.25■■□□□ 1.31
BRF1-219ENST00000551787 CSB-PGBD3P0DP91 1061 aa23.25■■□□□ 1.31
BRF1-219ENST00000551787 BARGINQ6ZT62 677 aa23.25■■□□□ 1.31
BRF1-219ENST00000551787 CARD14Q9BXL6 1004 aa23.24■■□□□ 1.31
BRF1-219ENST00000551787 GGNBP2Q9H3C7 697 aa23.24■■□□□ 1.31
BRF1-219ENST00000551787 FYB1O15117 783 aa23.23■■□□□ 1.31
BRF1-219ENST00000551787 COL18A1P39060 1754 aa23.22■■□□□ 1.31
BRF1-219ENST00000551787 CCDC125Q86Z20 511 aa23.22■■□□□ 1.31
BRF1-219ENST00000551787 WDR17Q8IZU2 1322 aa23.22■■□□□ 1.31
BRF1-219ENST00000551787 CRB1P82279 1406 aa23.22■■□□□ 1.31
BRF1-219ENST00000551787 THRAP3Q9Y2W1 955 aaKnown RBP23.21■■□□□ 1.31
BRF1-219ENST00000551787 OVOS2A0A0J9YW53 1432 aa23.21■■□□□ 1.31
BRF1-219ENST00000551787 OVOS2Q6IE36 1432 aa23.21■■□□□ 1.31
BRF1-219ENST00000551787 PDE3BQ13370 1112 aa23.2■■□□□ 1.3
BRF1-219ENST00000551787 C11orf95C9JLR9 678 aaPredicted RBP23.19■■□□□ 1.3
BRF1-219ENST00000551787 DEFB132Q7Z7B7 95 aa23.19■■□□□ 1.3
BRF1-219ENST00000551787 THSD7AQ9UPZ6 1657 aa23.18■■□□□ 1.3
BRF1-219ENST00000551787 BLMP54132 1417 aaPredicted RBP23.17■■□□□ 1.3
BRF1-219ENST00000551787 SF3B2Q13435 895 aaKnown RBP23.17■■□□□ 1.3
BRF1-219ENST00000551787 LTV1Q96GA3 475 aaPredicted RBP23.17■■□□□ 1.3
BRF1-219ENST00000551787 CARD10Q9BWT7 1032 aa23.17■■□□□ 1.3
BRF1-219ENST00000551787 NLRP2Q9NX02 1062 aa23.16■■□□□ 1.3
BRF1-219ENST00000551787 RGPD5Q99666 1765 aa23.15■■□□□ 1.3
BRF1-219ENST00000551787 RRS1Q15050 365 aaKnown RBP23.15■■□□□ 1.3
BRF1-219ENST00000551787 ANKRD24Q8TF21 1146 aa23.15■■□□□ 1.3
BRF1-219ENST00000551787 IP6K1Q92551 441 aa23.15■■□□□ 1.3
BRF1-219ENST00000551787 MAP3K19Q56UN5 1328 aa23.14■■□□□ 1.3
BRF1-219ENST00000551787 USP54Q70EL1 1684 aa23.14■■□□□ 1.29
BRF1-219ENST00000551787 NSD3Q9BZ95 1437 aa23.14■■□□□ 1.29
BRF1-219ENST00000551787 AMPHP49418 695 aa23.13■■□□□ 1.29
BRF1-219ENST00000551787 FAM196AQ6ZSG2 479 aa23.13■■□□□ 1.29
BRF1-219ENST00000551787 ERBB3P21860 1342 aa23.12■■□□□ 1.29
BRF1-219ENST00000551787 TRIM37O94972 964 aa23.12■■□□□ 1.29
BRF1-219ENST00000551787 DDB1Q16531 1140 aa23.12■■□□□ 1.29
BRF1-219ENST00000551787 PANK3Q9H999 370 aa23.12■■□□□ 1.29
BRF1-219ENST00000551787 MYOM1P52179 1685 aa23.11■■□□□ 1.29
BRF1-219ENST00000551787 HOXC9P31274 260 aa23.1■■□□□ 1.29
BRF1-219ENST00000551787 LTN1O94822 1766 aa23.09■■□□□ 1.29
BRF1-219ENST00000551787 CDCA7Q9BWT1 371 aaPredicted RBP23.08■■□□□ 1.29
BRF1-219ENST00000551787 CGNL1Q0VF96 1302 aa23.08■■□□□ 1.28
BRF1-219ENST00000551787 BAG6P46379 1132 aa23.07■■□□□ 1.28
BRF1-219ENST00000551787 EN1Q05925 392 aaPredicted RBP23.07■■□□□ 1.28
BRF1-219ENST00000551787 CCDC7Q96M83 1385 aa23.06■■□□□ 1.28
BRF1-219ENST00000551787 ABCC6O95255 1503 aa23.06■■□□□ 1.28
BRF1-219ENST00000551787 EXOC5O00471 708 aa23.05■■□□□ 1.28
BRF1-219ENST00000551787 MARCH10Q8NA82 808 aaPredicted RBP23.05■■□□□ 1.28
BRF1-219ENST00000551787 TNNT2P45379 298 aaPredicted RBP23.04■■□□□ 1.28
BRF1-219ENST00000551787 HSP90AB2PQ58FF8 381 aa23.04■■□□□ 1.28
BRF1-219ENST00000551787 KIF7Q2M1P5 1343 aa23.04■■□□□ 1.28
BRF1-219ENST00000551787 PPM1GO15355 546 aaPredicted RBP23.03■■□□□ 1.28
BRF1-219ENST00000551787 DISP2A7MBM2 1401 aa23.02■■□□□ 1.28
BRF1-219ENST00000551787 APBA3O96018 575 aa23.02■■□□□ 1.28
BRF1-219ENST00000551787 IL2RBP14784 551 aa23.02■■□□□ 1.28
BRF1-219ENST00000551787 EMILIN1Q9Y6C2 1016 aa23.02■■□□□ 1.28
BRF1-219ENST00000551787 PARP4Q9UKK3 1724 aaKnown RBP23.01■■□□□ 1.27
BRF1-219ENST00000551787 KIF20BQ96Q89 1820 aa22.99■■□□□ 1.27
BRF1-219ENST00000551787 EZH2Q15910 746 aaKnown RBP22.99■■□□□ 1.27
BRF1-219ENST00000551787 PTF1AQ7RTS3 328 aa22.99■■□□□ 1.27
BRF1-219ENST00000551787 NBPF6Q5VWK0 638 aa22.98■■□□□ 1.27
BRF1-219ENST00000551787 USHBP1Q8N6Y0 703 aa22.98■■□□□ 1.27
BRF1-219ENST00000551787 NBPF4Q96M43 638 aa22.98■■□□□ 1.27
BRF1-219ENST00000551787 LRRC37A3O60309 1634 aa22.97■■□□□ 1.27
BRF1-219ENST00000551787 RTL1A6NKG5 1358 aa22.97■■□□□ 1.27
BRF1-219ENST00000551787 OVOS2A0A0G2JMS6 1433 aa22.97■■□□□ 1.27
BRF1-219ENST00000551787 SRCAPQ6ZRS2 3230 aa22.96■■□□□ 1.27
BRF1-219ENST00000551787 FLT4P35916 1363 aa22.95■■□□□ 1.26
BRF1-219ENST00000551787 CAMKK2Q96RR4 588 aa22.95■■□□□ 1.26
BRF1-219ENST00000551787 KNSTRNQ9Y448 316 aa22.95■■□□□ 1.26
BRF1-219ENST00000551787 INSRP06213 1382 aa22.94■■□□□ 1.26
BRF1-219ENST00000551787 DDX54Q8TDD1 881 aaKnown RBP22.94■■□□□ 1.26
BRF1-219ENST00000551787 POLKQ9UBT6 870 aa22.94■■□□□ 1.26
BRF1-219ENST00000551787 RGPD1P0DJD0 1748 aa22.94■■□□□ 1.26
BRF1-219ENST00000551787 TNS2Q63HR2 1409 aa22.92■■□□□ 1.26
BRF1-219ENST00000551787 WNK3Q9BYP7 1800 aa22.92■■□□□ 1.26
BRF1-219ENST00000551787 PEAK1Q9H792 1746 aa22.92■■□□□ 1.26
BRF1-219ENST00000551787 BCL11BQ9C0K0 894 aaPredicted RBP22.92■■□□□ 1.26
BRF1-219ENST00000551787 PSDA5PKW4 1024 aaPredicted RBP22.91■■□□□ 1.26
BRF1-219ENST00000551787 KCNQ2O43526 872 aa22.91■■□□□ 1.26
BRF1-219ENST00000551787 MORC1Q86VD1 984 aa22.91■■□□□ 1.26
BRF1-219ENST00000551787 ACSBG1Q96GR2 724 aa22.91■■□□□ 1.26
BRF1-219ENST00000551787 SMG6Q86US8 1419 aaKnown RBP22.91■■□□□ 1.26
BRF1-219ENST00000551787 WASHC2AQ641Q2 1341 aa22.9■■□□□ 1.26
BRF1-219ENST00000551787 TNS1Q9HBL0 1735 aaKnown RBP22.9■■□□□ 1.26
BRF1-219ENST00000551787 KIF24Q5T7B8 1368 aa22.89■■□□□ 1.26
BRF1-219ENST00000551787 CNGB1Q14028 1251 aaPredicted RBP22.88■■□□□ 1.25
BRF1-219ENST00000551787 ZCRB1Q8TBF4 217 aaKnown RBP22.88■■□□□ 1.25
BRF1-219ENST00000551787 RGPD2P0DJD1 1756 aa22.88■■□□□ 1.25
BRF1-219ENST00000551787 AMER1Q5JTC6 1135 aaPredicted RBP22.87■■□□□ 1.25
BRF1-219ENST00000551787 RAPGEF4Q8WZA2 1011 aa22.87■■□□□ 1.25
BRF1-219ENST00000551787 MEGF6O75095 1541 aa22.86■■□□□ 1.25
BRF1-219ENST00000551787 NSD2O96028 1365 aa22.86■■□□□ 1.25
BRF1-219ENST00000551787 BCL9O00512 1426 aa22.85■■□□□ 1.25
BRF1-219ENST00000551787 PER1O15534 1290 aaPredicted RBP22.85■■□□□ 1.25
BRF1-219ENST00000551787 R3HDM1Q15032 1099 aaKnown RBP22.85■■□□□ 1.25
BRF1-219ENST00000551787 TATP17735 454 aaPredicted RBP22.84■■□□□ 1.25
BRF1-219ENST00000551787 CC2D1BQ5T0F9 858 aaKnown RBP22.84■■□□□ 1.25
BRF1-219ENST00000551787 EYA1Q99502 592 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms