RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 TMPOP42166 694 aaKnown RBP13.16□□□□□ -0.3
CNOT2-229ENST00000551179 SLC26A8Q96RN1 970 aa13.16□□□□□ -0.3
CNOT2-229ENST00000551179 LRRC7Q96NW7 1537 aa13.16□□□□□ -0.3
CNOT2-229ENST00000551179 ZNF142P52746 1687 aaPredicted RBP13.15□□□□□ -0.3
CNOT2-229ENST00000551179 PLEKHG3A1L390 1219 aa13.15□□□□□ -0.3
CNOT2-229ENST00000551179 NME9Q86XW9 330 aa13.15□□□□□ -0.3
CNOT2-229ENST00000551179 POLKQ9UBT6 870 aa13.15□□□□□ -0.3
CNOT2-229ENST00000551179 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
CNOT2-229ENST00000551179 USP6P35125 1406 aa13.14□□□□□ -0.31
CNOT2-229ENST00000551179 XRN1Q8IZH2 1706 aaKnown RBP13.14□□□□□ -0.31
CNOT2-229ENST00000551179 RIPK4P57078 832 aa13.14□□□□□ -0.31
CNOT2-229ENST00000551179 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
CNOT2-229ENST00000551179 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-229ENST00000551179 PRKAR2BP31323 418 aa13.13□□□□□ -0.31
CNOT2-229ENST00000551179 ANKLE2Q86XL3 938 aa13.13□□□□□ -0.31
CNOT2-229ENST00000551179 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
CNOT2-229ENST00000551179 FRAT1Q92837 279 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-229ENST00000551179 PLEKHF1Q96S99 279 aa13.13□□□□□ -0.31
CNOT2-229ENST00000551179 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
CNOT2-229ENST00000551179 ACEP12821 1306 aa13.13□□□□□ -0.31
CNOT2-229ENST00000551179 NGDNQ8NEJ9 315 aaKnown RBP13.12□□□□□ -0.31
CNOT2-229ENST00000551179 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
CNOT2-229ENST00000551179 PRR36Q9H6K5 1346 aa13.12□□□□□ -0.31
CNOT2-229ENST00000551179 BCAR3O75815 825 aa13.11□□□□□ -0.31
CNOT2-229ENST00000551179 RARSP54136 660 aaKnown RBP13.11□□□□□ -0.31
CNOT2-229ENST00000551179 HAP1P54257 671 aaPredicted RBP13.11□□□□□ -0.31
CNOT2-229ENST00000551179 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
CNOT2-229ENST00000551179 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
CNOT2-229ENST00000551179 C20orf194Q5TEA3 1177 aa13.1□□□□□ -0.31
CNOT2-229ENST00000551179 ZKSCAN2Q63HK3 967 aa13.1□□□□□ -0.31
CNOT2-229ENST00000551179 PMFBP1Q8TBY8 1022 aa13.1□□□□□ -0.31
CNOT2-229ENST00000551179 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
CNOT2-229ENST00000551179 CHMP4BQ9H444 224 aaKnown RBP13.1□□□□□ -0.31
CNOT2-229ENST00000551179 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
CNOT2-229ENST00000551179 OVOS2A0A0J9YW53 1432 aa13.1□□□□□ -0.31
CNOT2-229ENST00000551179 OVOS2Q6IE36 1432 aa13.1□□□□□ -0.31
CNOT2-229ENST00000551179 IPO8O15397 1037 aaKnown RBP13.09□□□□□ -0.31
CNOT2-229ENST00000551179 EMILIN1Q9Y6C2 1016 aa13.09□□□□□ -0.31
CNOT2-229ENST00000551179 MAP2P11137 1827 aaKnown RBP13.09□□□□□ -0.31
CNOT2-229ENST00000551179 IL13P35225 146 aa13.08□□□□□ -0.32
CNOT2-229ENST00000551179 GNAI1P63096 354 aa13.08□□□□□ -0.32
CNOT2-229ENST00000551179 CLUAP1Q96AJ1 413 aa13.08□□□□□ -0.32
CNOT2-229ENST00000551179 ADAMTSL3P82987 1691 aa13.08□□□□□ -0.32
CNOT2-229ENST00000551179 NALCNQ8IZF0 1738 aa13.08□□□□□ -0.32
CNOT2-229ENST00000551179 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
CNOT2-229ENST00000551179 FARP1Q9Y4F1 1045 aaPredicted RBP13.07□□□□□ -0.32
CNOT2-229ENST00000551179 FMN2Q9NZ56 1722 aa13.06□□□□□ -0.32
CNOT2-229ENST00000551179 HMOX1P09601 288 aa13.06□□□□□ -0.32
CNOT2-229ENST00000551179 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
CNOT2-229ENST00000551179 ALDH1L2Q3SY69 923 aa13.06□□□□□ -0.32
CNOT2-229ENST00000551179 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
CNOT2-229ENST00000551179 IFT57Q9NWB7 429 aa13.06□□□□□ -0.32
CNOT2-229ENST00000551179 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
CNOT2-229ENST00000551179 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
CNOT2-229ENST00000551179 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
CNOT2-229ENST00000551179 FLT4P35916 1363 aa13.06□□□□□ -0.32
CNOT2-229ENST00000551179 USP31Q70CQ4 1352 aa13.06□□□□□ -0.32
CNOT2-229ENST00000551179 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
CNOT2-229ENST00000551179 DZIP1LQ8IYY4 767 aaKnown RBP13.05□□□□□ -0.32
CNOT2-229ENST00000551179 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
CNOT2-229ENST00000551179 COG6Q9Y2V7 657 aa13.05□□□□□ -0.32
CNOT2-229ENST00000551179 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
CNOT2-229ENST00000551179 NCKAP5LQ9HCH0 1330 aa13.05□□□□□ -0.32
CNOT2-229ENST00000551179 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
CNOT2-229ENST00000551179 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
CNOT2-229ENST00000551179 KCNA6P17658 529 aa13.04□□□□□ -0.32
CNOT2-229ENST00000551179 AMPHP49418 695 aa13.04□□□□□ -0.32
CNOT2-229ENST00000551179 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
CNOT2-229ENST00000551179 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
CNOT2-229ENST00000551179 MVPQ14764 893 aaKnown RBP13.03□□□□□ -0.32
CNOT2-229ENST00000551179 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
CNOT2-229ENST00000551179 BCL2L13Q9BXK5 485 aa13.03□□□□□ -0.32
CNOT2-229ENST00000551179 RWDD1Q9H446 243 aaPredicted RBP13.03□□□□□ -0.32
CNOT2-229ENST00000551179 DDX19BQ9UMR2 479 aa13.03□□□□□ -0.32
CNOT2-229ENST00000551179 PANK1Q8TE04 598 aa13.02□□□□□ -0.33
CNOT2-229ENST00000551179 DDRGK1Q96HY6 314 aa13.02□□□□□ -0.33
CNOT2-229ENST00000551179 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.33
CNOT2-229ENST00000551179 ADGRL3Q9HAR2 1447 aa13.02□□□□□ -0.33
CNOT2-229ENST00000551179 PDE4AP27815 886 aa13.01□□□□□ -0.33
CNOT2-229ENST00000551179 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
CNOT2-229ENST00000551179 RTL1A6NKG5 1358 aa13.01□□□□□ -0.33
CNOT2-229ENST00000551179 SSH2Q76I76 1423 aa13.01□□□□□ -0.33
CNOT2-229ENST00000551179 EIF4A2Q14240 407 aaKnown RBP13□□□□□ -0.33
CNOT2-229ENST00000551179 SULT6B1Q6IMI4 303 aa13□□□□□ -0.33
CNOT2-229ENST00000551179 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
CNOT2-229ENST00000551179 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
CNOT2-229ENST00000551179 ITPRIPQ8IWB1 547 aa13□□□□□ -0.33
CNOT2-229ENST00000551179 GAS2L2Q8NHY3 880 aa13□□□□□ -0.33
CNOT2-229ENST00000551179 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
CNOT2-229ENST00000551179 ANP32EQ9BTT0 268 aa13□□□□□ -0.33
CNOT2-229ENST00000551179 CHD2O14647 1828 aaKnown RBP12.99□□□□□ -0.33
CNOT2-229ENST00000551179 USP54Q70EL1 1684 aa12.99□□□□□ -0.33
CNOT2-229ENST00000551179 SOX12O15370 315 aa12.99□□□□□ -0.33
CNOT2-229ENST00000551179 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
CNOT2-229ENST00000551179 NLRP6P59044 892 aa12.99□□□□□ -0.33
CNOT2-229ENST00000551179 FAM161AQ3B820 660 aa12.99□□□□□ -0.33
CNOT2-229ENST00000551179 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
CNOT2-229ENST00000551179 CFAP44Q96MT7 982 aa12.98□□□□□ -0.33
CNOT2-229ENST00000551179 BACH2Q9BYV9 841 aa12.98□□□□□ -0.33
CNOT2-229ENST00000551179 PHF8Q9UPP1 1060 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms