RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 BARGINQ6ZT62 677 aa16.54■□□□□ 0.24
LETMD1-221ENST00000550100 TCP11L2Q8N4U5 519 aa16.54■□□□□ 0.24
LETMD1-221ENST00000550100 OVOS2A0A0J9YW53 1432 aa16.53■□□□□ 0.24
LETMD1-221ENST00000550100 OVOS2Q6IE36 1432 aa16.53■□□□□ 0.24
LETMD1-221ENST00000550100 ANKRD36BQ8N2N9 1353 aa16.53■□□□□ 0.24
LETMD1-221ENST00000550100 NINLQ9Y2I6 1382 aa16.53■□□□□ 0.24
LETMD1-221ENST00000550100 SLC24A1O60721 1099 aa16.53■□□□□ 0.24
LETMD1-221ENST00000550100 DEFB132Q7Z7B7 95 aa16.52■□□□□ 0.23
LETMD1-221ENST00000550100 C11orf95C9JLR9 678 aaPredicted RBP16.51■□□□□ 0.23
LETMD1-221ENST00000550100 FYB1O15117 783 aa16.51■□□□□ 0.23
LETMD1-221ENST00000550100 CRB1P82279 1406 aa16.5■□□□□ 0.23
LETMD1-221ENST00000550100 WDR17Q8IZU2 1322 aa16.5■□□□□ 0.23
LETMD1-221ENST00000550100 MYOM1P52179 1685 aa16.5■□□□□ 0.23
LETMD1-221ENST00000550100 BLMP54132 1417 aaPredicted RBP16.5■□□□□ 0.23
LETMD1-221ENST00000550100 TOM1L2Q6ZVM7 507 aa16.49■□□□□ 0.23
LETMD1-221ENST00000550100 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
LETMD1-221ENST00000550100 EIF4G2P78344 907 aaKnown RBP eCLIP16.48■□□□□ 0.23
LETMD1-221ENST00000550100 GGNBP2Q9H3C7 697 aa16.48■□□□□ 0.23
LETMD1-221ENST00000550100 THRAP3Q9Y2W1 955 aaKnown RBP16.48■□□□□ 0.23
LETMD1-221ENST00000550100 SRCAPQ6ZRS2 3230 aa16.48■□□□□ 0.23
LETMD1-221ENST00000550100 LTN1O94822 1766 aa16.47■□□□□ 0.23
LETMD1-221ENST00000550100 CDCA8Q53HL2 280 aa16.47■□□□□ 0.23
LETMD1-221ENST00000550100 COG3Q96JB2 828 aa16.46■□□□□ 0.23
LETMD1-221ENST00000550100 CARD10Q9BWT7 1032 aa16.46■□□□□ 0.23
LETMD1-221ENST00000550100 POLR3GLQ9BT43 218 aa16.45■□□□□ 0.22
LETMD1-221ENST00000550100 MAP3K19Q56UN5 1328 aa16.44■□□□□ 0.22
LETMD1-221ENST00000550100 TRIM37O94972 964 aa16.44■□□□□ 0.22
LETMD1-221ENST00000550100 CSB-PGBD3P0DP91 1061 aa16.44■□□□□ 0.22
LETMD1-221ENST00000550100 IP6K1Q92551 441 aa16.44■□□□□ 0.22
LETMD1-221ENST00000550100 ERBB3P21860 1342 aa16.44■□□□□ 0.22
LETMD1-221ENST00000550100 DISP2A7MBM2 1401 aa16.44■□□□□ 0.22
LETMD1-221ENST00000550100 PARP4Q9UKK3 1724 aaKnown RBP16.43■□□□□ 0.22
LETMD1-221ENST00000550100 PDE3BQ13370 1112 aa16.43■□□□□ 0.22
LETMD1-221ENST00000550100 RRS1Q15050 365 aaKnown RBP16.43■□□□□ 0.22
LETMD1-221ENST00000550100 ANKRD24Q8TF21 1146 aa16.43■□□□□ 0.22
LETMD1-221ENST00000550100 FAM196AQ6ZSG2 479 aa16.42■□□□□ 0.22
LETMD1-221ENST00000550100 PTF1AQ7RTS3 328 aa16.42■□□□□ 0.22
LETMD1-221ENST00000550100 ABCC6O95255 1503 aa16.42■□□□□ 0.22
LETMD1-221ENST00000550100 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
LETMD1-221ENST00000550100 EN1Q05925 392 aaPredicted RBP16.42■□□□□ 0.22
LETMD1-221ENST00000550100 MARCH10Q8NA82 808 aaPredicted RBP16.42■□□□□ 0.22
LETMD1-221ENST00000550100 LTV1Q96GA3 475 aaPredicted RBP16.42■□□□□ 0.22
LETMD1-221ENST00000550100 WNK3Q9BYP7 1800 aa16.41■□□□□ 0.22
LETMD1-221ENST00000550100 HOXC9P31274 260 aa16.41■□□□□ 0.22
LETMD1-221ENST00000550100 NLRP2Q9NX02 1062 aa16.41■□□□□ 0.22
LETMD1-221ENST00000550100 LRRC37A3O60309 1634 aa16.41■□□□□ 0.22
LETMD1-221ENST00000550100 PEAK1Q9H792 1746 aa16.4■□□□□ 0.22
LETMD1-221ENST00000550100 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
LETMD1-221ENST00000550100 SF3B2Q13435 895 aaKnown RBP16.39■□□□□ 0.21
LETMD1-221ENST00000550100 DDB1Q16531 1140 aa16.39■□□□□ 0.21
LETMD1-221ENST00000550100 KIF20BQ96Q89 1820 aa16.38■□□□□ 0.21
LETMD1-221ENST00000550100 PANK3Q9H999 370 aa16.38■□□□□ 0.21
LETMD1-221ENST00000550100 RGPD2P0DJD1 1756 aa16.37■□□□□ 0.21
LETMD1-221ENST00000550100 AMPHP49418 695 aa16.37■□□□□ 0.21
LETMD1-221ENST00000550100 EZH2Q15910 746 aaKnown RBP16.37■□□□□ 0.21
LETMD1-221ENST00000550100 CAMKK2Q96RR4 588 aa16.37■□□□□ 0.21
LETMD1-221ENST00000550100 RGPD1P0DJD0 1748 aa16.37■□□□□ 0.21
LETMD1-221ENST00000550100 CCDC7Q96M83 1385 aa16.37■□□□□ 0.21
LETMD1-221ENST00000550100 BAG6P46379 1132 aa16.36■□□□□ 0.21
LETMD1-221ENST00000550100 HSP90AB2PQ58FF8 381 aa16.36■□□□□ 0.21
LETMD1-221ENST00000550100 APBA3O96018 575 aa16.35■□□□□ 0.21
LETMD1-221ENST00000550100 EMILIN1Q9Y6C2 1016 aa16.35■□□□□ 0.21
LETMD1-221ENST00000550100 SBF2Q86WG5 1849 aa16.35■□□□□ 0.21
LETMD1-221ENST00000550100 EXOC5O00471 708 aa16.35■□□□□ 0.21
LETMD1-221ENST00000550100 CDCA7Q9BWT1 371 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-221ENST00000550100 NBPF6Q5VWK0 638 aa16.34■□□□□ 0.21
LETMD1-221ENST00000550100 NBPF4Q96M43 638 aa16.34■□□□□ 0.21
LETMD1-221ENST00000550100 KIF7Q2M1P5 1343 aa16.34■□□□□ 0.21
LETMD1-221ENST00000550100 IL2RBP14784 551 aa16.33■□□□□ 0.2
LETMD1-221ENST00000550100 USHBP1Q8N6Y0 703 aa16.33■□□□□ 0.2
LETMD1-221ENST00000550100 OVOS2A0A0G2JMS6 1433 aa16.33■□□□□ 0.2
LETMD1-221ENST00000550100 CGNL1Q0VF96 1302 aa16.32■□□□□ 0.2
LETMD1-221ENST00000550100 FAM208AQ9UK61 1670 aaKnown RBP16.32■□□□□ 0.2
LETMD1-221ENST00000550100 KCNQ2O43526 872 aa16.31■□□□□ 0.2
LETMD1-221ENST00000550100 TNS2Q63HR2 1409 aa16.3■□□□□ 0.2
LETMD1-221ENST00000550100 RTL1A6NKG5 1358 aa16.3■□□□□ 0.2
LETMD1-221ENST00000550100 PSDA5PKW4 1024 aaPredicted RBP16.3■□□□□ 0.2
LETMD1-221ENST00000550100 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
LETMD1-221ENST00000550100 POLKQ9UBT6 870 aa16.3■□□□□ 0.2
LETMD1-221ENST00000550100 BCL9O00512 1426 aa16.3■□□□□ 0.2
LETMD1-221ENST00000550100 INSRP06213 1382 aa16.3■□□□□ 0.2
LETMD1-221ENST00000550100 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
LETMD1-221ENST00000550100 PROM2Q8N271 834 aa16.29■□□□□ 0.2
LETMD1-221ENST00000550100 BCL11BQ9C0K0 894 aaPredicted RBP16.29■□□□□ 0.2
LETMD1-221ENST00000550100 MEGF6O75095 1541 aa16.28■□□□□ 0.2
LETMD1-221ENST00000550100 PPM1GO15355 546 aaPredicted RBP16.28■□□□□ 0.2
LETMD1-221ENST00000550100 ACSBG1Q96GR2 724 aa16.28■□□□□ 0.2
LETMD1-221ENST00000550100 FLT4P35916 1363 aa16.27■□□□□ 0.2
LETMD1-221ENST00000550100 DDX54Q8TDD1 881 aaKnown RBP16.26■□□□□ 0.19
LETMD1-221ENST00000550100 ANKRD26Q9UPS8 1709 aa16.25■□□□□ 0.19
LETMD1-221ENST00000550100 WASHC2AQ641Q2 1341 aa16.25■□□□□ 0.19
LETMD1-221ENST00000550100 PER1O15534 1290 aaPredicted RBP16.25■□□□□ 0.19
LETMD1-221ENST00000550100 R3HDM1Q15032 1099 aaKnown RBP16.25■□□□□ 0.19
LETMD1-221ENST00000550100 AMER1Q5JTC6 1135 aaPredicted RBP16.25■□□□□ 0.19
LETMD1-221ENST00000550100 SHANK3Q9BYB0 1731 aa16.25■□□□□ 0.19
LETMD1-221ENST00000550100 KIF24Q5T7B8 1368 aa16.25■□□□□ 0.19
LETMD1-221ENST00000550100 RREB1Q92766 1687 aa16.25■□□□□ 0.19
LETMD1-221ENST00000550100 KAT6BQ8WYB5 2073 aa16.24■□□□□ 0.19
LETMD1-221ENST00000550100 PLSCR1O15162 318 aa16.24■□□□□ 0.19
LETMD1-221ENST00000550100 NUP188Q5SRE5 1749 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms