RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 HSCBQ8IWL3 235 aa12.92□□□□□ -0.34
ERBB3-214ENST00000550070 PNPLA6Q8IY17 1366 aa12.92□□□□□ -0.34
ERBB3-214ENST00000550070 PRAM1Q96QH2 718 aa12.91□□□□□ -0.34
ERBB3-214ENST00000550070 ATAD2Q6PL18 1390 aa12.91□□□□□ -0.34
ERBB3-214ENST00000550070 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
ERBB3-214ENST00000550070 RBM25P49756 843 aaKnown RBP12.91□□□□□ -0.34
ERBB3-214ENST00000550070 MLECQ14165 292 aa12.91□□□□□ -0.34
ERBB3-214ENST00000550070 ALDH1L2Q3SY69 923 aa12.91□□□□□ -0.34
ERBB3-214ENST00000550070 CHD1LQ86WJ1 897 aa12.9□□□□□ -0.34
ERBB3-214ENST00000550070 PANK2Q9BZ23 570 aa12.9□□□□□ -0.34
ERBB3-214ENST00000550070 DDIT3P35638 169 aa12.9□□□□□ -0.34
ERBB3-214ENST00000550070 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
ERBB3-214ENST00000550070 FBLN1P23142 703 aa12.9□□□□□ -0.35
ERBB3-214ENST00000550070 CLTCQ00610 1675 aaKnown RBP12.89□□□□□ -0.35
ERBB3-214ENST00000550070 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
ERBB3-214ENST00000550070 FCHSD2O94868 740 aa12.89□□□□□ -0.35
ERBB3-214ENST00000550070 ARHGAP31Q2M1Z3 1444 aa12.89□□□□□ -0.35
ERBB3-214ENST00000550070 LRRC7Q96NW7 1537 aa12.89□□□□□ -0.35
ERBB3-214ENST00000550070 SNX21Q969T3 373 aa12.88□□□□□ -0.35
ERBB3-214ENST00000550070 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
ERBB3-214ENST00000550070 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
ERBB3-214ENST00000550070 ZBTB7BO15156 539 aaPredicted RBP12.88□□□□□ -0.35
ERBB3-214ENST00000550070 PRKAR2BP31323 418 aa12.88□□□□□ -0.35
ERBB3-214ENST00000550070 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
ERBB3-214ENST00000550070 CDK19Q9BWU1 502 aa12.88□□□□□ -0.35
ERBB3-214ENST00000550070 SLC52A1Q9NWF4 448 aa12.88□□□□□ -0.35
ERBB3-214ENST00000550070 DIP2CQ9Y2E4 1556 aa12.87□□□□□ -0.35
ERBB3-214ENST00000550070 PPIP5K1Q6PFW1 1433 aa12.87□□□□□ -0.35
ERBB3-214ENST00000550070 KIF20BQ96Q89 1820 aa12.87□□□□□ -0.35
ERBB3-214ENST00000550070 BRPF1P55201 1214 aaPredicted RBP12.87□□□□□ -0.35
ERBB3-214ENST00000550070 FAM135BQ49AJ0 1406 aa12.86□□□□□ -0.35
ERBB3-214ENST00000550070 TMEM131LA2VDJ0 1609 aa12.86□□□□□ -0.35
ERBB3-214ENST00000550070 CDC42BPGQ6DT37 1551 aa12.86□□□□□ -0.35
ERBB3-214ENST00000550070 VAMP4O75379 141 aa12.86□□□□□ -0.35
ERBB3-214ENST00000550070 BMP2KLQ5H9B9 411 aa12.86□□□□□ -0.35
ERBB3-214ENST00000550070 ANKRD45Q5TZF3 282 aa12.86□□□□□ -0.35
ERBB3-214ENST00000550070 PHACTR3Q96KR7 559 aa12.86□□□□□ -0.35
ERBB3-214ENST00000550070 KIF2CQ99661 725 aa12.86□□□□□ -0.35
ERBB3-214ENST00000550070 C1orf115Q9H7X2 142 aa12.86□□□□□ -0.35
ERBB3-214ENST00000550070 MRPL50Q8N5N7 158 aaKnown RBP12.86□□□□□ -0.35
ERBB3-214ENST00000550070 THUMPD2Q9BTF0 503 aaKnown RBP12.86□□□□□ -0.35
ERBB3-214ENST00000550070 POLKQ9UBT6 870 aa12.86□□□□□ -0.35
ERBB3-214ENST00000550070 DDX11L8A8MPP1 907 aa12.85□□□□□ -0.35
ERBB3-214ENST00000550070 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.85□□□□□ -0.35
ERBB3-214ENST00000550070 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
ERBB3-214ENST00000550070 ZFP91Q96JP5 570 aaPredicted RBP12.85□□□□□ -0.35
ERBB3-214ENST00000550070 TNPO1Q92973 898 aaKnown RBP12.85□□□□□ -0.35
ERBB3-214ENST00000550070 ARHGEF40Q8TER5 1519 aa12.85□□□□□ -0.35
ERBB3-214ENST00000550070 CD2BP2O95400 341 aaKnown RBP12.84□□□□□ -0.35
ERBB3-214ENST00000550070 HMOX1P09601 288 aa12.84□□□□□ -0.35
ERBB3-214ENST00000550070 ZNF428Q96B54 188 aa12.84□□□□□ -0.35
ERBB3-214ENST00000550070 MRE11P49959 708 aa12.84□□□□□ -0.35
ERBB3-214ENST00000550070 SIRT2Q8IXJ6 389 aa12.84□□□□□ -0.35
ERBB3-214ENST00000550070 GCC1Q96CN9 775 aa12.84□□□□□ -0.35
ERBB3-214ENST00000550070 PREX1Q8TCU6 1659 aa12.84□□□□□ -0.35
ERBB3-214ENST00000550070 ELL2O00472 640 aaPredicted RBP12.83□□□□□ -0.35
ERBB3-214ENST00000550070 HSP90AB1P08238 724 aaKnown RBP12.83□□□□□ -0.35
ERBB3-214ENST00000550070 NFE2L2Q16236 605 aa12.83□□□□□ -0.35
ERBB3-214ENST00000550070 MAP2P11137 1827 aaKnown RBP12.83□□□□□ -0.36
ERBB3-214ENST00000550070 ARHGAP45Q92619 1136 aa12.83□□□□□ -0.36
ERBB3-214ENST00000550070 PIK3R4Q99570 1358 aa12.83□□□□□ -0.36
ERBB3-214ENST00000550070 PTCH1Q13635 1447 aa12.83□□□□□ -0.36
ERBB3-214ENST00000550070 TBC1D9Q6ZT07 1266 aa12.82□□□□□ -0.36
ERBB3-214ENST00000550070 GRPEL1Q9HAV7 217 aa12.82□□□□□ -0.36
ERBB3-214ENST00000550070 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.82□□□□□ -0.36
ERBB3-214ENST00000550070 ALKQ9UM73 1620 aa12.82□□□□□ -0.36
ERBB3-214ENST00000550070 RAB3GAP1Q15042 981 aa12.82□□□□□ -0.36
ERBB3-214ENST00000550070 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
ERBB3-214ENST00000550070 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
ERBB3-214ENST00000550070 RICTORQ6R327 1708 aa12.82□□□□□ -0.36
ERBB3-214ENST00000550070 NEO1Q92859 1461 aa12.82□□□□□ -0.36
ERBB3-214ENST00000550070 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
ERBB3-214ENST00000550070 FBXO31Q5XUX0 539 aaPredicted RBP12.81□□□□□ -0.36
ERBB3-214ENST00000550070 MBIPQ9NS73 344 aa12.81□□□□□ -0.36
ERBB3-214ENST00000550070 ZNF853P0CG23 659 aa12.81□□□□□ -0.36
ERBB3-214ENST00000550070 EMILIN1Q9Y6C2 1016 aa12.81□□□□□ -0.36
ERBB3-214ENST00000550070 ABCC4O15439 1325 aa12.8□□□□□ -0.36
ERBB3-214ENST00000550070 GNAI1P63096 354 aa12.8□□□□□ -0.36
ERBB3-214ENST00000550070 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
ERBB3-214ENST00000550070 CHMP4BQ9H444 224 aaKnown RBP12.8□□□□□ -0.36
ERBB3-214ENST00000550070 IFT57Q9NWB7 429 aa12.8□□□□□ -0.36
ERBB3-214ENST00000550070 CLCN1P35523 988 aa12.8□□□□□ -0.36
ERBB3-214ENST00000550070 WAPLQ7Z5K2 1190 aa12.8□□□□□ -0.36
ERBB3-214ENST00000550070 GAS2L3Q86XJ1 694 aa12.8□□□□□ -0.36
ERBB3-214ENST00000550070 K7ELQ4 463 aaPredicted RBP12.79□□□□□ -0.36
ERBB3-214ENST00000550070 IL13P35225 146 aa12.79□□□□□ -0.36
ERBB3-214ENST00000550070 NCLP19338 710 aaKnown RBP12.79□□□□□ -0.36
ERBB3-214ENST00000550070 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
ERBB3-214ENST00000550070 TWISTNBQ3B726 338 aaPredicted RBP12.79□□□□□ -0.36
ERBB3-214ENST00000550070 CNPY4Q8N129 248 aa12.79□□□□□ -0.36
ERBB3-214ENST00000550070 C8orf58Q8NAV2 365 aa12.79□□□□□ -0.36
ERBB3-214ENST00000550070 GBP4Q96PP9 640 aa12.79□□□□□ -0.36
ERBB3-214ENST00000550070 DLG5Q8TDM6 1919 aa12.78□□□□□ -0.36
ERBB3-214ENST00000550070 HSP90AA1P07900 732 aaKnown RBP12.78□□□□□ -0.36
ERBB3-214ENST00000550070 ISY1Q9ULR0 285 aaKnown RBP12.78□□□□□ -0.36
ERBB3-214ENST00000550070 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.36
ERBB3-214ENST00000550070 TEX2Q8IWB9 1127 aa12.77□□□□□ -0.36
ERBB3-214ENST00000550070 GAS2L2Q8NHY3 880 aa12.77□□□□□ -0.36
ERBB3-214ENST00000550070 IPO4Q8TEX9 1081 aaKnown RBP12.77□□□□□ -0.36
ERBB3-214ENST00000550070 PRDM10Q9NQV6 1147 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms