RNA–Protein interactions for RNA: ENST00000549633.5

SLC38A1-207, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best)

Gene SLC38A1, Length 1,076 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-207ENST00000549633 AKAP12Q02952 1782 aa30.37■■■□□ 2.45
SLC38A1-207ENST00000549633 PDGFDQ9GZP0 370 aaPredicted RBP30.37■■■□□ 2.45
SLC38A1-207ENST00000549633 AXIN2Q9Y2T1 843 aa30.36■■■□□ 2.45
SLC38A1-207ENST00000549633 BRD4O60885 1362 aaPredicted RBP30.36■■■□□ 2.45
SLC38A1-207ENST00000549633 NINLQ9Y2I6 1382 aa30.36■■■□□ 2.45
SLC38A1-207ENST00000549633 C11orf95C9JLR9 678 aaPredicted RBP30.35■■■□□ 2.45
SLC38A1-207ENST00000549633 PLSCR1O15162 318 aa30.35■■■□□ 2.45
SLC38A1-207ENST00000549633 MARCH10Q8NA82 808 aaPredicted RBP30.33■■■□□ 2.45
SLC38A1-207ENST00000549633 BCL11BQ9C0K0 894 aaPredicted RBP30.32■■■□□ 2.44
SLC38A1-207ENST00000549633 WDR17Q8IZU2 1322 aa30.31■■■□□ 2.44
SLC38A1-207ENST00000549633 MYOM1P52179 1685 aa30.31■■■□□ 2.44
SLC38A1-207ENST00000549633 PROM2Q8N271 834 aa30.31■■■□□ 2.44
SLC38A1-207ENST00000549633 CPSF1Q10570 1443 aaKnown RBP30.3■■■□□ 2.44
SLC38A1-207ENST00000549633 SOX12O15370 315 aa30.29■■■□□ 2.44
SLC38A1-207ENST00000549633 DCAF8L1A6NGE4 600 aa30.28■■■□□ 2.44
SLC38A1-207ENST00000549633 ZBTB7AO95365 584 aa30.28■■■□□ 2.44
SLC38A1-207ENST00000549633 ARHGEF25Q86VW2 580 aa30.24■■■□□ 2.43
SLC38A1-207ENST00000549633 TRPM1Q7Z4N2 1603 aa30.24■■■□□ 2.43
SLC38A1-207ENST00000549633 ATF5Q9Y2D1 282 aaPredicted RBP30.23■■■□□ 2.43
SLC38A1-207ENST00000549633 TTC21BQ7Z4L5 1316 aa30.22■■■□□ 2.43
SLC38A1-207ENST00000549633 CSB-PGBD3P0DP91 1061 aa30.22■■■□□ 2.43
SLC38A1-207ENST00000549633 BCL9O00512 1426 aa30.22■■■□□ 2.43
SLC38A1-207ENST00000549633 PTGER2P43116 358 aa30.21■■■□□ 2.43
SLC38A1-207ENST00000549633 EVC2Q86UK5 1308 aa30.21■■■□□ 2.43
SLC38A1-207ENST00000549633 TXNRD1Q16881 649 aa30.2■■■□□ 2.43
SLC38A1-207ENST00000549633 CDCA7Q9BWT1 371 aaPredicted RBP30.2■■■□□ 2.43
SLC38A1-207ENST00000549633 CARD10Q9BWT7 1032 aa30.2■■■□□ 2.43
SLC38A1-207ENST00000549633 NFAT5O94916 1531 aa30.19■■■□□ 2.42
SLC38A1-207ENST00000549633 STK32BQ9NY57 414 aa30.17■■■□□ 2.42
SLC38A1-207ENST00000549633 KCNH5Q8NCM2 988 aa30.16■■■□□ 2.42
SLC38A1-207ENST00000549633 L3MBTL2Q969R5 705 aa30.16■■■□□ 2.42
SLC38A1-207ENST00000549633 NHSQ6T4R5 1651 aa30.15■■■□□ 2.42
SLC38A1-207ENST00000549633 EXOC5O00471 708 aa30.15■■■□□ 2.42
SLC38A1-207ENST00000549633 SLC15A2Q16348 729 aa30.15■■■□□ 2.42
SLC38A1-207ENST00000549633 TNS2Q63HR2 1409 aa30.13■■■□□ 2.41
SLC38A1-207ENST00000549633 ZNF692Q9BU19 519 aaPredicted RBP30.12■■■□□ 2.41
SLC38A1-207ENST00000549633 MON2Q7Z3U7 1717 aa30.11■■■□□ 2.41
SLC38A1-207ENST00000549633 ACSBG1Q96GR2 724 aa30.11■■■□□ 2.41
SLC38A1-207ENST00000549633 FHDC1Q9C0D6 1143 aaPredicted RBP30.11■■■□□ 2.41
SLC38A1-207ENST00000549633 TTC21AQ8NDW8 1320 aa30.11■■■□□ 2.41
SLC38A1-207ENST00000549633 KTN1Q86UP2 1357 aaKnown RBP30.1■■■□□ 2.41
SLC38A1-207ENST00000549633 CCDC7Q96M83 1385 aa30.1■■■□□ 2.41
SLC38A1-207ENST00000549633 SYT17Q9BSW7 474 aa30.09■■■□□ 2.41
SLC38A1-207ENST00000549633 LTN1O94822 1766 aa30.07■■■□□ 2.4
SLC38A1-207ENST00000549633 PAPPAQ13219 1627 aa30.07■■■□□ 2.4
SLC38A1-207ENST00000549633 ABCC6O95255 1503 aa30.06■■■□□ 2.4
SLC38A1-207ENST00000549633 BTAF1O14981 1849 aa30.06■■■□□ 2.4
SLC38A1-207ENST00000549633 ZNF784Q8NCA9 323 aaPredicted RBP30.06■■■□□ 2.4
SLC38A1-207ENST00000549633 SGIP1Q9BQI5 828 aa30.06■■■□□ 2.4
SLC38A1-207ENST00000549633 ROCK2O75116 1388 aaKnown RBP30.05■■■□□ 2.4
SLC38A1-207ENST00000549633 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.05■■■□□ 2.41e-6■■■■□ 22.6
SLC38A1-207ENST00000549633 SIN3AQ96ST3 1273 aa30.05■■■□□ 2.4
SLC38A1-207ENST00000549633 MTFR1LQ9H019 292 aa30.05■■■□□ 2.4
SLC38A1-207ENST00000549633 UTRNP46939 3433 aa30.04■■■□□ 2.4
SLC38A1-207ENST00000549633 USP54Q70EL1 1684 aa30.02■■■□□ 2.4
SLC38A1-207ENST00000549633 NLRP2Q9NX02 1062 aa30.02■■■□□ 2.4
SLC38A1-207ENST00000549633 ERBB3P21860 1342 aa30■■■□□ 2.39
SLC38A1-207ENST00000549633 NME9Q86XW9 330 aa30■■■□□ 2.39
SLC38A1-207ENST00000549633 CHD4Q14839 1912 aa30■■■□□ 2.39
SLC38A1-207ENST00000549633 ZNF827Q17R98 1081 aa29.98■■■□□ 2.39
SLC38A1-207ENST00000549633 CD163L1Q9NR16 1453 aa29.98■■■□□ 2.39
SLC38A1-207ENST00000549633 ARXQ96QS3 562 aa29.97■■■□□ 2.39
SLC38A1-207ENST00000549633 USP31Q70CQ4 1352 aa29.97■■■□□ 2.39
SLC38A1-207ENST00000549633 KAT6BQ8WYB5 2073 aa29.96■■■□□ 2.39
SLC38A1-207ENST00000549633 IL2RBP14784 551 aa29.96■■■□□ 2.39
SLC38A1-207ENST00000549633 NEUROD1Q13562 356 aa29.96■■■□□ 2.39
SLC38A1-207ENST00000549633 LRRC4BQ9NT99 713 aa29.95■■■□□ 2.39
SLC38A1-207ENST00000549633 SBNO2Q9Y2G9 1366 aa29.94■■■□□ 2.38
SLC38A1-207ENST00000549633 ANKRD24Q8TF21 1146 aa29.94■■■□□ 2.38
SLC38A1-207ENST00000549633 TMC1Q8TDI8 760 aa29.9■■■□□ 2.38
SLC38A1-207ENST00000549633 TUBGCP6Q96RT7 1819 aa29.89■■■□□ 2.38
SLC38A1-207ENST00000549633 QSER1Q2KHR3 1735 aa29.87■■■□□ 2.37
SLC38A1-207ENST00000549633 MAP3K5Q99683 1374 aa29.87■■■□□ 2.37
SLC38A1-207ENST00000549633 KLHL34Q8N239 644 aa29.86■■■□□ 2.37
SLC38A1-207ENST00000549633 SLC12A5Q9H2X9 1139 aa29.86■■■□□ 2.37
SLC38A1-207ENST00000549633 DDX54Q8TDD1 881 aaKnown RBP29.85■■■□□ 2.37
SLC38A1-207ENST00000549633 AKT1S1Q96B36 256 aa29.85■■■□□ 2.37
SLC38A1-207ENST00000549633 SENP3-EIF4A1A0A087X0R7 540 aa29.84■■■□□ 2.37
SLC38A1-207ENST00000549633 KCNQ4P56696 695 aa29.84■■■□□ 2.37
SLC38A1-207ENST00000549633 DOT1LQ8TEK3 1739 aa29.83■■■□□ 2.37
SLC38A1-207ENST00000549633 LTV1Q96GA3 475 aaPredicted RBP29.83■■■□□ 2.37
SLC38A1-207ENST00000549633 COL24A1Q17RW2 1714 aa29.82■■■□□ 2.36
SLC38A1-207ENST00000549633 EDC4Q6P2E9 1401 aaKnown RBP29.82■■■□□ 2.36
SLC38A1-207ENST00000549633 GPR162Q16538 588 aa29.82■■■□□ 2.36
SLC38A1-207ENST00000549633 HDGFL2Q7Z4V5 671 aaPredicted RBP29.82■■■□□ 2.36
SLC38A1-207ENST00000549633 A0A1W2PP64 1363 aa29.81■■■□□ 2.36
SLC38A1-207ENST00000549633 PNPLA7Q6ZV29 1317 aa29.81■■■□□ 2.36
SLC38A1-207ENST00000549633 C1QTNF8P60827 252 aa29.81■■■□□ 2.36
SLC38A1-207ENST00000549633 FAM208AQ9UK61 1670 aaKnown RBP29.81■■■□□ 2.36
SLC38A1-207ENST00000549633 RGPD2P0DJD1 1756 aa29.8■■■□□ 2.36
SLC38A1-207ENST00000549633 CARD11Q9BXL7 1154 aa29.79■■■□□ 2.36
SLC38A1-207ENST00000549633 SHANK3Q9BYB0 1731 aa29.79■■■□□ 2.36
SLC38A1-207ENST00000549633 PELP1Q8IZL8 1130 aaKnown RBP29.78■■■□□ 2.36
SLC38A1-207ENST00000549633 LY75O60449 1722 aa29.77■■■□□ 2.36
SLC38A1-207ENST00000549633 IP6K1Q92551 441 aa29.77■■■□□ 2.36
SLC38A1-207ENST00000549633 SYTL4Q96C24 671 aaPredicted RBP29.77■■■□□ 2.36
SLC38A1-207ENST00000549633 SLC27A3Q5K4L6 730 aa29.76■■■□□ 2.35
SLC38A1-207ENST00000549633 FBLN1P23142 703 aa29.74■■■□□ 2.35
SLC38A1-207ENST00000549633 POLD1P28340 1107 aa29.74■■■□□ 2.35
SLC38A1-207ENST00000549633 PRIM1P49642 420 aaKnown RBP29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms