RNA–Protein interactions for RNA: ENST00000549621.5

RITA1-202, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RITA1, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-202ENST00000549621 PDE3AQ14432 1141 aa28.15■■■□□ 2.1
RITA1-202ENST00000549621 EXOSC9Q06265 439 aaKnown RBP28.14■■■□□ 2.1
RITA1-202ENST00000549621 NLRP6P59044 892 aa28.14■■■□□ 2.09
RITA1-202ENST00000549621 AEBP1Q8IUX7 1158 aa28.14■■■□□ 2.09
RITA1-202ENST00000549621 CANXP27824 592 aaKnown RBP28.11■■■□□ 2.09
RITA1-202ENST00000549621 SULT6B1Q6IMI4 303 aa28.11■■■□□ 2.09
RITA1-202ENST00000549621 BCL2L13Q9BXK5 485 aa28.11■■■□□ 2.09
RITA1-202ENST00000549621 ARHGEF10O15013 1369 aa28.11■■■□□ 2.09
RITA1-202ENST00000549621 NUTM2GQ5VZR2 741 aa28.1■■■□□ 2.09
RITA1-202ENST00000549621 C14orf37Q86TY3 774 aa28.1■■■□□ 2.09
RITA1-202ENST00000549621 ABTB2Q8N961 1025 aa28.09■■■□□ 2.09
RITA1-202ENST00000549621 FRAT1Q92837 279 aaPredicted RBP28.09■■■□□ 2.09
RITA1-202ENST00000549621 THUMPD2Q9BTF0 503 aaKnown RBP28.09■■■□□ 2.09
RITA1-202ENST00000549621 KDM2BQ8NHM5 1336 aa28.08■■■□□ 2.09
RITA1-202ENST00000549621 PAK3O75914 559 aaPredicted RBP28.08■■■□□ 2.09
RITA1-202ENST00000549621 ESCO1Q5FWF5 840 aa28.08■■■□□ 2.09
RITA1-202ENST00000549621 PANK1Q8TE04 598 aa28.08■■■□□ 2.09
RITA1-202ENST00000549621 KIF24Q5T7B8 1368 aa28.07■■■□□ 2.08
RITA1-202ENST00000549621 STRCP1A6NGW2 1772 aa28.07■■■□□ 2.08
RITA1-202ENST00000549621 CALD1Q05682 793 aaKnown RBP28.06■■■□□ 2.08
RITA1-202ENST00000549621 LMOD3Q0VAK6 560 aa28.06■■■□□ 2.08
RITA1-202ENST00000549621 AMPHP49418 695 aa28.06■■■□□ 2.08
RITA1-202ENST00000549621 PROSER2Q86WR7 435 aaPredicted RBP28.06■■■□□ 2.08
RITA1-202ENST00000549621 TNNQ9UQP3 1299 aa28.04■■■□□ 2.08
RITA1-202ENST00000549621 NFAT5O94916 1531 aa28.04■■■□□ 2.08
RITA1-202ENST00000549621 LTN1O94822 1766 aa28.04■■■□□ 2.08
RITA1-202ENST00000549621 IFT57Q9NWB7 429 aa28.03■■■□□ 2.08
RITA1-202ENST00000549621 COG6Q9Y2V7 657 aa28.03■■■□□ 2.08
RITA1-202ENST00000549621 ZNF853P0CG23 659 aa28.02■■■□□ 2.08
RITA1-202ENST00000549621 RLBP1P12271 317 aa28.02■■■□□ 2.08
RITA1-202ENST00000549621 KDRP35968 1356 aa28.02■■■□□ 2.08
RITA1-202ENST00000549621 ORAI2Q96SN7 254 aa28.02■■■□□ 2.08
RITA1-202ENST00000549621 IGSF1Q8N6C5 1336 aa28.02■■■□□ 2.08
RITA1-202ENST00000549621 KIF1AQ12756 1690 aa28.01■■■□□ 2.08
RITA1-202ENST00000549621 SSH1Q8WYL5 1049 aa28.01■■■□□ 2.07
RITA1-202ENST00000549621 SMC4Q9NTJ3 1288 aa28.01■■■□□ 2.07
RITA1-202ENST00000549621 LAS1LQ9Y4W2 734 aaKnown RBP28.01■■■□□ 2.07
RITA1-202ENST00000549621 HOXC9P31274 260 aa28.01■■■□□ 2.07
RITA1-202ENST00000549621 PSME1Q06323 249 aa28.01■■■□□ 2.07
RITA1-202ENST00000549621 TRPM3Q9HCF6 1732 aaPredicted RBP28■■■□□ 2.07
RITA1-202ENST00000549621 FAM83GA6ND36 823 aa28■■■□□ 2.07
RITA1-202ENST00000549621 GNAI1P63096 354 aa28■■■□□ 2.07
RITA1-202ENST00000549621 CENPQQ7L2Z9 268 aaPredicted RBP28■■■□□ 2.07
RITA1-202ENST00000549621 RTL1A6NKG5 1358 aa28■■■□□ 2.07
RITA1-202ENST00000549621 C1orf167Q5SNV9 1468 aa27.99■■■□□ 2.07
RITA1-202ENST00000549621 EYA1Q99502 592 aa27.98■■■□□ 2.07
RITA1-202ENST00000549621 ZKSCAN2Q63HK3 967 aa27.97■■■□□ 2.07
RITA1-202ENST00000549621 MBIPQ9NS73 344 aa27.97■■■□□ 2.07
RITA1-202ENST00000549621 DCTN1Q14203 1278 aa27.96■■■□□ 2.07
RITA1-202ENST00000549621 C19orf44Q9H6X5 657 aa27.96■■■□□ 2.07
RITA1-202ENST00000549621 PHRF1Q9P1Y6 1649 aaKnown RBP27.96■■■□□ 2.07
RITA1-202ENST00000549621 CLUAP1Q96AJ1 413 aa27.96■■■□□ 2.07
RITA1-202ENST00000549621 CFAP44Q96MT7 982 aa27.96■■■□□ 2.07
RITA1-202ENST00000549621 HSPA2P54652 639 aa27.95■■■□□ 2.06
RITA1-202ENST00000549621 TMEM94Q12767 1356 aa27.94■■■□□ 2.06
RITA1-202ENST00000549621 TCERG1O14776 1098 aaKnown RBP27.94■■■□□ 2.06
RITA1-202ENST00000549621 SLIT3O75094 1523 aa27.94■■■□□ 2.06
RITA1-202ENST00000549621 ALDH1L2Q3SY69 923 aa27.94■■■□□ 2.06
RITA1-202ENST00000549621 FOXO3O43524 673 aa27.93■■■□□ 2.06
RITA1-202ENST00000549621 DCCP43146 1447 aa27.92■■■□□ 2.06
RITA1-202ENST00000549621 MST1RQ04912 1400 aa27.92■■■□□ 2.06
RITA1-202ENST00000549621 ZNF428Q96B54 188 aa27.92■■■□□ 2.06
RITA1-202ENST00000549621 TRIM27P14373 513 aa27.91■■■□□ 2.06
RITA1-202ENST00000549621 SKAP1Q86WV1 359 aa27.91■■■□□ 2.06
RITA1-202ENST00000549621 DZIP1LQ8IYY4 767 aaKnown RBP27.91■■■□□ 2.06
RITA1-202ENST00000549621 NCOA3Q9Y6Q9 1424 aa27.91■■■□□ 2.06
RITA1-202ENST00000549621 KIF16BQ96L93 1317 aa27.91■■■□□ 2.06
RITA1-202ENST00000549621 XPCQ01831 940 aaPredicted RBP27.91■■■□□ 2.06
RITA1-202ENST00000549621 VAMP4O75379 141 aa27.9■■■□□ 2.06
RITA1-202ENST00000549621 AAMPQ13685 434 aa27.9■■■□□ 2.06
RITA1-202ENST00000549621 TSPYL6Q8N831 410 aa27.9■■■□□ 2.06
RITA1-202ENST00000549621 LMTK3Q96Q04 1460 aa27.9■■■□□ 2.06
RITA1-202ENST00000549621 MVPQ14764 893 aaKnown RBP27.89■■■□□ 2.06
RITA1-202ENST00000549621 ATF7IPQ6VMQ6 1270 aa27.89■■■□□ 2.06
RITA1-202ENST00000549621 NOB1Q9ULX3 412 aaKnown RBP27.89■■■□□ 2.06
RITA1-202ENST00000549621 MS4A1P11836 297 aa27.89■■■□□ 2.05
RITA1-202ENST00000549621 MTHFSDQ2M296 383 aaKnown RBP27.89■■■□□ 2.05
RITA1-202ENST00000549621 BRPF1P55201 1214 aaPredicted RBP27.88■■■□□ 2.05
RITA1-202ENST00000549621 MCM10Q7L590 875 aa27.88■■■□□ 2.05
RITA1-202ENST00000549621 FTSJ3Q8IY81 847 aaKnown RBP27.88■■■□□ 2.05
RITA1-202ENST00000549621 KCNH5Q8NCM2 988 aa27.88■■■□□ 2.05
RITA1-202ENST00000549621 KDM4FA0A1W2PPD8 638 aa27.87■■■□□ 2.05
RITA1-202ENST00000549621 IP6K1Q92551 441 aa27.87■■■□□ 2.05
RITA1-202ENST00000549621 CRB1P82279 1406 aa27.87■■■□□ 2.05
RITA1-202ENST00000549621 ALS2Q96Q42 1657 aa27.86■■■□□ 2.05
RITA1-202ENST00000549621 STRCQ7RTU9 1775 aa27.86■■■□□ 2.05
RITA1-202ENST00000549621 IGHDP01880 384 aa27.86■■■□□ 2.05
RITA1-202ENST00000549621 LRRC37A3O60309 1634 aa27.86■■■□□ 2.05
RITA1-202ENST00000549621 LTV1Q96GA3 475 aaPredicted RBP27.85■■■□□ 2.05
RITA1-202ENST00000549621 C8orf58Q8NAV2 365 aa27.85■■■□□ 2.05
RITA1-202ENST00000549621 USP19O94966 1318 aa27.85■■■□□ 2.05
RITA1-202ENST00000549621 KRT28Q7Z3Y7 464 aa27.84■■■□□ 2.05
RITA1-202ENST00000549621 XIRP1Q702N8 1843 aaKnown RBP27.84■■■□□ 2.05
RITA1-202ENST00000549621 TWISTNBQ3B726 338 aaPredicted RBP27.84■■■□□ 2.05
RITA1-202ENST00000549621 CHL1O00533 1208 aa27.83■■■□□ 2.05
RITA1-202ENST00000549621 ATF3P18847 181 aa27.83■■■□□ 2.05
RITA1-202ENST00000549621 GAS2L2Q8NHY3 880 aa27.83■■■□□ 2.05
RITA1-202ENST00000549621 MRPL50Q8N5N7 158 aaKnown RBP27.82■■■□□ 2.04
RITA1-202ENST00000549621 IPO8O15397 1037 aaKnown RBP27.82■■■□□ 2.04
RITA1-202ENST00000549621 PCDHB15Q9Y5E8 787 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms