RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 PLSCR1O15162 318 aa13.07□□□□□ -0.32
AC055716.3-201ENST00000547533 CSB-PGBD3P0DP91 1061 aa13.07□□□□□ -0.32
AC055716.3-201ENST00000547533 YY1P25490 414 aa13.07□□□□□ -0.32
AC055716.3-201ENST00000547533 SLIT3O75094 1523 aa13.07□□□□□ -0.32
AC055716.3-201ENST00000547533 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
AC055716.3-201ENST00000547533 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
AC055716.3-201ENST00000547533 WDR17Q8IZU2 1322 aa13.06□□□□□ -0.32
AC055716.3-201ENST00000547533 PIK3C2AO00443 1686 aa13.05□□□□□ -0.32
AC055716.3-201ENST00000547533 PEAK1Q9H792 1746 aa13.05□□□□□ -0.32
AC055716.3-201ENST00000547533 TTC21AQ8NDW8 1320 aa13.05□□□□□ -0.32
AC055716.3-201ENST00000547533 RGPD5Q99666 1765 aa13.04□□□□□ -0.32
AC055716.3-201ENST00000547533 CPSF1Q10570 1443 aaKnown RBP13.04□□□□□ -0.32
AC055716.3-201ENST00000547533 COL18A1P39060 1754 aa13.03□□□□□ -0.32
AC055716.3-201ENST00000547533 STK32BQ9NY57 414 aa13.03□□□□□ -0.32
AC055716.3-201ENST00000547533 ROCK2O75116 1388 aaKnown RBP13.03□□□□□ -0.32
AC055716.3-201ENST00000547533 KAT6BQ8WYB5 2073 aa13.02□□□□□ -0.33
AC055716.3-201ENST00000547533 EXOC5O00471 708 aa13.02□□□□□ -0.33
AC055716.3-201ENST00000547533 CCDC7Q96M83 1385 aa13.02□□□□□ -0.33
AC055716.3-201ENST00000547533 ABCC6O95255 1503 aa13.02□□□□□ -0.33
AC055716.3-201ENST00000547533 SOX12O15370 315 aa13.01□□□□□ -0.33
AC055716.3-201ENST00000547533 CARD10Q9BWT7 1032 aa13.01□□□□□ -0.33
AC055716.3-201ENST00000547533 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
AC055716.3-201ENST00000547533 KTN1Q86UP2 1357 aaKnown RBP13.01□□□□□ -0.33
AC055716.3-201ENST00000547533 BCL9O00512 1426 aa13.01□□□□□ -0.33
AC055716.3-201ENST00000547533 ARHGEF25Q86VW2 580 aa13□□□□□ -0.33
AC055716.3-201ENST00000547533 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
AC055716.3-201ENST00000547533 L3MBTL2Q969R5 705 aa12.99□□□□□ -0.33
AC055716.3-201ENST00000547533 MARCH10Q8NA82 808 aaPredicted RBP12.98□□□□□ -0.33
AC055716.3-201ENST00000547533 AXIN2Q9Y2T1 843 aa12.98□□□□□ -0.33
AC055716.3-201ENST00000547533 LTN1O94822 1766 aa12.98□□□□□ -0.33
AC055716.3-201ENST00000547533 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
AC055716.3-201ENST00000547533 TNS2Q63HR2 1409 aa12.96□□□□□ -0.33
AC055716.3-201ENST00000547533 NHSQ6T4R5 1651 aa12.96□□□□□ -0.33
AC055716.3-201ENST00000547533 ZBTB7AO95365 584 aa12.96□□□□□ -0.33
AC055716.3-201ENST00000547533 NEUROD1Q13562 356 aa12.96□□□□□ -0.33
AC055716.3-201ENST00000547533 TXNRD1Q16881 649 aa12.96□□□□□ -0.33
AC055716.3-201ENST00000547533 HDGFL2Q7Z4V5 671 aaPredicted RBP12.96□□□□□ -0.33
AC055716.3-201ENST00000547533 CHD4Q14839 1912 aa12.96□□□□□ -0.34
AC055716.3-201ENST00000547533 NFAT5O94916 1531 aa12.95□□□□□ -0.34
AC055716.3-201ENST00000547533 SLC15A2Q16348 729 aa12.95□□□□□ -0.34
AC055716.3-201ENST00000547533 NLRP2Q9NX02 1062 aa12.95□□□□□ -0.34
AC055716.3-201ENST00000547533 MYOM1P52179 1685 aa12.94□□□□□ -0.34
AC055716.3-201ENST00000547533 USP54Q70EL1 1684 aa12.94□□□□□ -0.34
AC055716.3-201ENST00000547533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.94□□□□□ -0.34
AC055716.3-201ENST00000547533 TMC1Q8TDI8 760 aa12.94□□□□□ -0.34
AC055716.3-201ENST00000547533 MTFR1LQ9H019 292 aa12.94□□□□□ -0.34
AC055716.3-201ENST00000547533 ANO8Q9HCE9 1232 aaPredicted RBP12.94□□□□□ -0.34
AC055716.3-201ENST00000547533 IL2RBP14784 551 aa12.93□□□□□ -0.34
AC055716.3-201ENST00000547533 TERF2IPQ9NYB0 399 aa12.93□□□□□ -0.34
AC055716.3-201ENST00000547533 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
AC055716.3-201ENST00000547533 SBNO2Q9Y2G9 1366 aa12.93□□□□□ -0.34
AC055716.3-201ENST00000547533 FAM208AQ9UK61 1670 aaKnown RBP12.93□□□□□ -0.34
AC055716.3-201ENST00000547533 BTAF1O14981 1849 aa12.92□□□□□ -0.34
AC055716.3-201ENST00000547533 USP31Q70CQ4 1352 aa12.92□□□□□ -0.34
AC055716.3-201ENST00000547533 ERBB3P21860 1342 aa12.91□□□□□ -0.34
AC055716.3-201ENST00000547533 PROM2Q8N271 834 aa12.91□□□□□ -0.34
AC055716.3-201ENST00000547533 CARD11Q9BXL7 1154 aa12.91□□□□□ -0.34
AC055716.3-201ENST00000547533 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
AC055716.3-201ENST00000547533 PTF1AQ7RTS3 328 aa12.9□□□□□ -0.34
AC055716.3-201ENST00000547533 ACSBG1Q96GR2 724 aa12.9□□□□□ -0.34
AC055716.3-201ENST00000547533 SIN3AQ96ST3 1273 aa12.9□□□□□ -0.34
AC055716.3-201ENST00000547533 EDC4Q6P2E9 1401 aaKnown RBP12.89□□□□□ -0.35
AC055716.3-201ENST00000547533 HMGB2P26583 209 aaKnown RBP12.89□□□□□ -0.35
AC055716.3-201ENST00000547533 PTGER2P43116 358 aa12.89□□□□□ -0.35
AC055716.3-201ENST00000547533 ANKRD24Q8TF21 1146 aa12.89□□□□□ -0.35
AC055716.3-201ENST00000547533 FHDC1Q9C0D6 1143 aaPredicted RBP12.89□□□□□ -0.35
AC055716.3-201ENST00000547533 POLD1P28340 1107 aa12.88□□□□□ -0.35
AC055716.3-201ENST00000547533 NME9Q86XW9 330 aa12.88□□□□□ -0.35
AC055716.3-201ENST00000547533 ARXQ96QS3 562 aa12.88□□□□□ -0.35
AC055716.3-201ENST00000547533 SYT17Q9BSW7 474 aa12.88□□□□□ -0.35
AC055716.3-201ENST00000547533 PDGFDQ9GZP0 370 aaPredicted RBP12.87□□□□□ -0.35
AC055716.3-201ENST00000547533 QSER1Q2KHR3 1735 aa12.87□□□□□ -0.35
AC055716.3-201ENST00000547533 TONSLQ96HA7 1378 aa12.86□□□□□ -0.35
AC055716.3-201ENST00000547533 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
AC055716.3-201ENST00000547533 PUS7Q96PZ0 661 aaKnown RBP12.86□□□□□ -0.35
AC055716.3-201ENST00000547533 DDX54Q8TDD1 881 aaKnown RBP12.85□□□□□ -0.35
AC055716.3-201ENST00000547533 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
AC055716.3-201ENST00000547533 COG3Q96JB2 828 aa12.85□□□□□ -0.35
AC055716.3-201ENST00000547533 PAPPAQ13219 1627 aa12.84□□□□□ -0.35
AC055716.3-201ENST00000547533 MAP3K5Q99683 1374 aa12.84□□□□□ -0.35
AC055716.3-201ENST00000547533 GPR162Q16538 588 aa12.84□□□□□ -0.35
AC055716.3-201ENST00000547533 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
AC055716.3-201ENST00000547533 ZNF784Q8NCA9 323 aaPredicted RBP12.84□□□□□ -0.35
AC055716.3-201ENST00000547533 IP6K1Q92551 441 aa12.84□□□□□ -0.35
AC055716.3-201ENST00000547533 SYTL4Q96C24 671 aaPredicted RBP12.84□□□□□ -0.35
AC055716.3-201ENST00000547533 SLC12A5Q9H2X9 1139 aa12.84□□□□□ -0.35
AC055716.3-201ENST00000547533 AMPHP49418 695 aa12.83□□□□□ -0.36
AC055716.3-201ENST00000547533 LTV1Q96GA3 475 aaPredicted RBP12.83□□□□□ -0.36
AC055716.3-201ENST00000547533 TFCP2L1Q9NZI6 479 aa12.83□□□□□ -0.36
AC055716.3-201ENST00000547533 CD163L1Q9NR16 1453 aa12.83□□□□□ -0.36
AC055716.3-201ENST00000547533 A0A1W2PP64 1363 aa12.82□□□□□ -0.36
AC055716.3-201ENST00000547533 SMG6Q86US8 1419 aaKnown RBP12.82□□□□□ -0.36
AC055716.3-201ENST00000547533 DOT1LQ8TEK3 1739 aa12.82□□□□□ -0.36
AC055716.3-201ENST00000547533 SGIP1Q9BQI5 828 aa12.81□□□□□ -0.36
AC055716.3-201ENST00000547533 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
AC055716.3-201ENST00000547533 CGNL1Q0VF96 1302 aa12.8□□□□□ -0.36
AC055716.3-201ENST00000547533 ANKRD36BQ8N2N9 1353 aa12.8□□□□□ -0.36
AC055716.3-201ENST00000547533 LY75O60449 1722 aa12.79□□□□□ -0.36
AC055716.3-201ENST00000547533 MSH5O43196 834 aa12.79□□□□□ -0.36
AC055716.3-201ENST00000547533 ZNF827Q17R98 1081 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms