RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 NFAT5O94916 1531 aa20.32■□□□□ 0.84
COL2A1-209ENST00000546974 C11orf95C9JLR9 678 aaPredicted RBP20.32■□□□□ 0.84
COL2A1-209ENST00000546974 SOX12O15370 315 aa20.32■□□□□ 0.84
COL2A1-209ENST00000546974 SLC24A1O60721 1099 aa20.32■□□□□ 0.84
COL2A1-209ENST00000546974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.32■□□□□ 0.84
COL2A1-209ENST00000546974 SLC12A5Q9H2X9 1139 aa20.32■□□□□ 0.84
COL2A1-209ENST00000546974 USP54Q70EL1 1684 aa20.32■□□□□ 0.84
COL2A1-209ENST00000546974 TESK2Q96S53 571 aa20.31■□□□□ 0.84
COL2A1-209ENST00000546974 ST20-MTHFSA0A0A6YYL1 179 aa20.3■□□□□ 0.84
COL2A1-209ENST00000546974 APBA3O96018 575 aa20.3■□□□□ 0.84
COL2A1-209ENST00000546974 EZH2Q15910 746 aaKnown RBP20.3■□□□□ 0.84
COL2A1-209ENST00000546974 CAMKK2Q96RR4 588 aa20.3■□□□□ 0.84
COL2A1-209ENST00000546974 TERF2IPQ9NYB0 399 aa20.3■□□□□ 0.84
COL2A1-209ENST00000546974 EDC4Q6P2E9 1401 aaKnown RBP20.29■□□□□ 0.84
COL2A1-209ENST00000546974 ABCC6O95255 1503 aa20.29■□□□□ 0.84
COL2A1-209ENST00000546974 PARD3Q8TEW0 1356 aa20.29■□□□□ 0.84
COL2A1-209ENST00000546974 WNK3Q9BYP7 1800 aa20.29■□□□□ 0.84
COL2A1-209ENST00000546974 DDB1Q16531 1140 aa20.28■□□□□ 0.84
COL2A1-209ENST00000546974 NME9Q86XW9 330 aa20.28■□□□□ 0.84
COL2A1-209ENST00000546974 CDCA7Q9BWT1 371 aaPredicted RBP20.28■□□□□ 0.84
COL2A1-209ENST00000546974 CARD10Q9BWT7 1032 aa20.28■□□□□ 0.84
COL2A1-209ENST00000546974 A0A1W2PP64 1363 aa20.27■□□□□ 0.84
COL2A1-209ENST00000546974 PSDA5PKW4 1024 aaPredicted RBP20.27■□□□□ 0.84
COL2A1-209ENST00000546974 LRRC37A3O60309 1634 aa20.27■□□□□ 0.83
COL2A1-209ENST00000546974 NINLQ9Y2I6 1382 aa20.26■□□□□ 0.83
COL2A1-209ENST00000546974 CSB-PGBD3P0DP91 1061 aa20.26■□□□□ 0.83
COL2A1-209ENST00000546974 PEAK1Q9H792 1746 aa20.26■□□□□ 0.83
COL2A1-209ENST00000546974 OVOS2A0A0G2JMS6 1433 aa20.26■□□□□ 0.83
COL2A1-209ENST00000546974 OVOS2A0A0J9YW53 1432 aa20.26■□□□□ 0.83
COL2A1-209ENST00000546974 OVOS2Q6IE36 1432 aa20.26■□□□□ 0.83
COL2A1-209ENST00000546974 SBF2Q86WG5 1849 aa20.25■□□□□ 0.83
COL2A1-209ENST00000546974 LRP5O75197 1615 aa20.24■□□□□ 0.83
COL2A1-209ENST00000546974 LTN1O94822 1766 aa20.24■□□□□ 0.83
COL2A1-209ENST00000546974 CCDC7Q96M83 1385 aa20.23■□□□□ 0.83
COL2A1-209ENST00000546974 RREB1Q92766 1687 aa20.23■□□□□ 0.83
COL2A1-209ENST00000546974 R3HDM1Q15032 1099 aaKnown RBP20.22■□□□□ 0.83
COL2A1-209ENST00000546974 MARCH10Q8NA82 808 aaPredicted RBP20.2■□□□□ 0.82
COL2A1-209ENST00000546974 TIMELESSQ9UNS1 1208 aa20.2■□□□□ 0.82
COL2A1-209ENST00000546974 ERBB3P21860 1342 aa20.2■□□□□ 0.82
COL2A1-209ENST00000546974 USP47Q96K76 1375 aa20.2■□□□□ 0.82
COL2A1-209ENST00000546974 BCL9O00512 1426 aa20.19■□□□□ 0.82
COL2A1-209ENST00000546974 NUP188Q5SRE5 1749 aa20.19■□□□□ 0.82
COL2A1-209ENST00000546974 EXOC5O00471 708 aa20.19■□□□□ 0.82
COL2A1-209ENST00000546974 TMF1P82094 1093 aa20.19■□□□□ 0.82
COL2A1-209ENST00000546974 BCL11BQ9C0K0 894 aaPredicted RBP20.18■□□□□ 0.82
COL2A1-209ENST00000546974 RGPD3A6NKT7 1758 aaPredicted RBP20.17■□□□□ 0.82
COL2A1-209ENST00000546974 RGPD4Q7Z3J3 1758 aa20.17■□□□□ 0.82
COL2A1-209ENST00000546974 PLSCR1O15162 318 aa20.17■□□□□ 0.82
COL2A1-209ENST00000546974 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
COL2A1-209ENST00000546974 ANKRD36BQ8N2N9 1353 aa20.17■□□□□ 0.82
COL2A1-209ENST00000546974 NBPF14Q5TI25 921 aa20.16■□□□□ 0.82
COL2A1-209ENST00000546974 ANKRD24Q8TF21 1146 aa20.16■□□□□ 0.82
COL2A1-209ENST00000546974 NLRP2Q9NX02 1062 aa20.16■□□□□ 0.82
COL2A1-209ENST00000546974 IP6K1Q92551 441 aa20.15■□□□□ 0.82
COL2A1-209ENST00000546974 COG3Q96JB2 828 aa20.15■□□□□ 0.82
COL2A1-209ENST00000546974 TNS2Q63HR2 1409 aa20.14■□□□□ 0.81
COL2A1-209ENST00000546974 CDCA8Q53HL2 280 aa20.13■□□□□ 0.81
COL2A1-209ENST00000546974 IL2RBP14784 551 aa20.12■□□□□ 0.81
COL2A1-209ENST00000546974 PTF1AQ7RTS3 328 aa20.11■□□□□ 0.81
COL2A1-209ENST00000546974 PCGF6Q9BYE7 350 aa20.11■□□□□ 0.81
COL2A1-209ENST00000546974 FAM208AQ9UK61 1670 aaKnown RBP20.1■□□□□ 0.81
COL2A1-209ENST00000546974 KAT6BQ8WYB5 2073 aa20.09■□□□□ 0.81
COL2A1-209ENST00000546974 MAP3K19Q56UN5 1328 aa20.08■□□□□ 0.81
COL2A1-209ENST00000546974 FYB1O15117 783 aa20.08■□□□□ 0.81
COL2A1-209ENST00000546974 HOXC9P31274 260 aa20.07■□□□□ 0.8
COL2A1-209ENST00000546974 AMPHP49418 695 aa20.07■□□□□ 0.8
COL2A1-209ENST00000546974 FBLN1P23142 703 aa20.06■□□□□ 0.8
COL2A1-209ENST00000546974 PROM2Q8N271 834 aa20.06■□□□□ 0.8
COL2A1-209ENST00000546974 LTV1Q96GA3 475 aaPredicted RBP20.06■□□□□ 0.8
COL2A1-209ENST00000546974 GGNBP2Q9H3C7 697 aa20.05■□□□□ 0.8
COL2A1-209ENST00000546974 NHSQ6T4R5 1651 aa20.05■□□□□ 0.8
COL2A1-209ENST00000546974 KCNQ2O43526 872 aa20.04■□□□□ 0.8
COL2A1-209ENST00000546974 RTL1A6NKG5 1358 aa20.04■□□□□ 0.8
COL2A1-209ENST00000546974 KIF20BQ96Q89 1820 aa20.04■□□□□ 0.8
COL2A1-209ENST00000546974 TXNRD1Q16881 649 aa20.02■□□□□ 0.8
COL2A1-209ENST00000546974 ACSBG1Q96GR2 724 aa20.02■□□□□ 0.8
COL2A1-209ENST00000546974 ANO8Q9HCE9 1232 aaPredicted RBP20.02■□□□□ 0.8
COL2A1-209ENST00000546974 MYOM1P52179 1685 aa20.02■□□□□ 0.8
COL2A1-209ENST00000546974 RGPD2P0DJD1 1756 aa20.02■□□□□ 0.8
COL2A1-209ENST00000546974 RRS1Q15050 365 aaKnown RBP20.01■□□□□ 0.79
COL2A1-209ENST00000546974 SPON1Q9HCB6 807 aa20■□□□□ 0.79
COL2A1-209ENST00000546974 CARD14Q9BXL6 1004 aa19.99■□□□□ 0.79
COL2A1-209ENST00000546974 BTAF1O14981 1849 aa19.99■□□□□ 0.79
COL2A1-209ENST00000546974 NSD3Q9BZ95 1437 aa19.97■□□□□ 0.79
COL2A1-209ENST00000546974 DDX54Q8TDD1 881 aaKnown RBP19.97■□□□□ 0.79
COL2A1-209ENST00000546974 STK32BQ9NY57 414 aa19.97■□□□□ 0.79
COL2A1-209ENST00000546974 CASZ1Q86V15 1759 aa19.97■□□□□ 0.79
COL2A1-209ENST00000546974 KIF24Q5T7B8 1368 aa19.96■□□□□ 0.79
COL2A1-209ENST00000546974 NBPF6Q5VWK0 638 aa19.96■□□□□ 0.79
COL2A1-209ENST00000546974 NBPF4Q96M43 638 aa19.96■□□□□ 0.79
COL2A1-209ENST00000546974 INSRP06213 1382 aa19.95■□□□□ 0.79
COL2A1-209ENST00000546974 SMG6Q86US8 1419 aaKnown RBP19.95■□□□□ 0.78
COL2A1-209ENST00000546974 SLC15A2Q16348 729 aa19.95■□□□□ 0.78
COL2A1-209ENST00000546974 ZCRB1Q8TBF4 217 aaKnown RBP19.95■□□□□ 0.78
COL2A1-209ENST00000546974 FLT4P35916 1363 aa19.95■□□□□ 0.78
COL2A1-209ENST00000546974 SHANK3Q9BYB0 1731 aa19.94■□□□□ 0.78
COL2A1-209ENST00000546974 CGNL1Q0VF96 1302 aa19.94■□□□□ 0.78
COL2A1-209ENST00000546974 MEGF6O75095 1541 aa19.93■□□□□ 0.78
COL2A1-209ENST00000546974 HSP90AB2PQ58FF8 381 aa19.93■□□□□ 0.78
COL2A1-209ENST00000546974 CCER1Q8TC90 406 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms