RNA–Protein interactions for RNA: ENST00000546696.1

AC078880.1-201, humanhuman

TSL 4 BASIC

Gene AC078880.1, Length 553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.1-201ENST00000546696 VEGFBP49765 207 aa13.23□□□□□ -0.29
AC078880.1-201ENST00000546696 PURBQ96QR8 312 aaKnown RBP13.23□□□□□ -0.29
AC078880.1-201ENST00000546696 MRPL14Q6P1L8 145 aaKnown RBP13.22□□□□□ -0.29
AC078880.1-201ENST00000546696 CDV3Q9UKY7 258 aaKnown RBP13.22□□□□□ -0.29
AC078880.1-201ENST00000546696 SOBPA7XYQ1 873 aa13.21□□□□□ -0.29
AC078880.1-201ENST00000546696 SCARF1Q14162 830 aa13.21□□□□□ -0.29
AC078880.1-201ENST00000546696 SLC10A4Q96EP9 437 aa13.21□□□□□ -0.29
AC078880.1-201ENST00000546696 OCSTAMPQ9BR26 566 aa13.2□□□□□ -0.3
AC078880.1-201ENST00000546696 CCDC116Q8IYX3 515 aa13.19□□□□□ -0.3
AC078880.1-201ENST00000546696 TRIM34Q9BYJ4 488 aa13.19□□□□□ -0.3
AC078880.1-201ENST00000546696 ADAM32Q8TC27 787 aa13.18□□□□□ -0.3
AC078880.1-201ENST00000546696 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
AC078880.1-201ENST00000546696 C6orf118Q5T5N4 469 aa13.17□□□□□ -0.3
AC078880.1-201ENST00000546696 KCTD15Q96SI1 283 aaPredicted RBP13.17□□□□□ -0.3
AC078880.1-201ENST00000546696 NXF1Q9UBU9 619 aaKnown RBP13.16□□□□□ -0.3
AC078880.1-201ENST00000546696 MEIOBQ8N635 442 aa13.14□□□□□ -0.31
AC078880.1-201ENST00000546696 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
AC078880.1-201ENST00000546696 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
AC078880.1-201ENST00000546696 UPP2O95045 317 aa13.12□□□□□ -0.31
AC078880.1-201ENST00000546696 DHX9Q08211 1270 aaKnown RBP13.12□□□□□ -0.31
AC078880.1-201ENST00000546696 PPP1R26Q5T8A7 1209 aaPredicted RBP13.12□□□□□ -0.31
AC078880.1-201ENST00000546696 PGPEP1Q9NXJ5 209 aa13.12□□□□□ -0.31
AC078880.1-201ENST00000546696 WIPF1O43516 503 aa13.11□□□□□ -0.31
AC078880.1-201ENST00000546696 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
AC078880.1-201ENST00000546696 LINC00528Q8N1L1 170 aa13.1□□□□□ -0.31
AC078880.1-201ENST00000546696 SOCS7O14512 581 aa13.09□□□□□ -0.31
AC078880.1-201ENST00000546696 INTS6LQ5JSJ4 861 aaKnown RBP13.09□□□□□ -0.31
AC078880.1-201ENST00000546696 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
AC078880.1-201ENST00000546696 BMP2P12643 396 aa13.08□□□□□ -0.32
AC078880.1-201ENST00000546696 SLC16A10Q8TF71 515 aa13.08□□□□□ -0.32
AC078880.1-201ENST00000546696 TSEN34Q9BSV6 310 aaKnown RBP13.08□□□□□ -0.32
AC078880.1-201ENST00000546696 ERBB4Q15303 1308 aa13.07□□□□□ -0.32
AC078880.1-201ENST00000546696 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
AC078880.1-201ENST00000546696 GMPRP36959 345 aa13.06□□□□□ -0.32
AC078880.1-201ENST00000546696 NPAS3Q8IXF0 933 aa13.06□□□□□ -0.32
AC078880.1-201ENST00000546696 H3BM21 787 aa13.05□□□□□ -0.32
AC078880.1-201ENST00000546696 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
AC078880.1-201ENST00000546696 CBLBQ13191 982 aa13.05□□□□□ -0.32
AC078880.1-201ENST00000546696 Q6ZVU0 165 aa13.05□□□□□ -0.32
AC078880.1-201ENST00000546696 MAN1A2O60476 641 aa13.04□□□□□ -0.32
AC078880.1-201ENST00000546696 APBB1O00213 710 aa13.03□□□□□ -0.32
AC078880.1-201ENST00000546696 MTMR14Q8NCE2 650 aa13.03□□□□□ -0.32
AC078880.1-201ENST00000546696 ESPNB1AK53 854 aa13.02□□□□□ -0.33
AC078880.1-201ENST00000546696 FBXO45P0C2W1 286 aa13.02□□□□□ -0.33
AC078880.1-201ENST00000546696 INSM1Q01101 510 aaPredicted RBP13.01□□□□□ -0.33
AC078880.1-201ENST00000546696 IRF7Q92985 503 aa13.01□□□□□ -0.33
AC078880.1-201ENST00000546696 SNRKQ9NRH2 765 aa13.01□□□□□ -0.33
AC078880.1-201ENST00000546696 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
AC078880.1-201ENST00000546696 SOS2Q07890 1332 aaPredicted RBP13□□□□□ -0.33
AC078880.1-201ENST00000546696 RAB15P59190 212 aa13□□□□□ -0.33
AC078880.1-201ENST00000546696 SEPT12Q8IYM1 358 aa13□□□□□ -0.33
AC078880.1-201ENST00000546696 DNMT3LQ9UJW3 386 aa13□□□□□ -0.33
AC078880.1-201ENST00000546696 PCDHB9Q9Y5E1 797 aa12.99□□□□□ -0.33
AC078880.1-201ENST00000546696 ERVH48-1M5A8F1 160 aa12.98□□□□□ -0.33
AC078880.1-201ENST00000546696 TMPRSS4Q9NRS4 437 aa12.98□□□□□ -0.33
AC078880.1-201ENST00000546696 SPINT1O43278 529 aa12.97□□□□□ -0.33
AC078880.1-201ENST00000546696 NR1H3Q13133 447 aa12.97□□□□□ -0.33
AC078880.1-201ENST00000546696 ZNF784Q8NCA9 323 aaPredicted RBP12.97□□□□□ -0.33
AC078880.1-201ENST00000546696 TTLL8A6PVC2 850 aa12.96□□□□□ -0.33
AC078880.1-201ENST00000546696 GPR37L1O60883 481 aa12.96□□□□□ -0.33
AC078880.1-201ENST00000546696 AGBL1Q96MI9 1066 aa12.96□□□□□ -0.33
AC078880.1-201ENST00000546696 FIGNL2A6NMB9 653 aa12.95□□□□□ -0.34
AC078880.1-201ENST00000546696 MCCD1P59942 119 aaPredicted RBP12.95□□□□□ -0.34
AC078880.1-201ENST00000546696 ZNF592Q92610 1267 aa12.95□□□□□ -0.34
AC078880.1-201ENST00000546696 TRIM52Q96A61 297 aa12.95□□□□□ -0.34
AC078880.1-201ENST00000546696 STK17AQ9UEE5 414 aa12.95□□□□□ -0.34
AC078880.1-201ENST00000546696 ZNF330Q9Y3S2 320 aaPredicted RBP12.94□□□□□ -0.34
AC078880.1-201ENST00000546696 LILRA1O75019 489 aa12.93□□□□□ -0.34
AC078880.1-201ENST00000546696 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
AC078880.1-201ENST00000546696 CCDC125Q86Z20 511 aa12.93□□□□□ -0.34
AC078880.1-201ENST00000546696 LORP23490 312 aaPredicted RBP12.92□□□□□ -0.34
AC078880.1-201ENST00000546696 RELBQ01201 579 aa12.92□□□□□ -0.34
AC078880.1-201ENST00000546696 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.92□□□□□ -0.34
AC078880.1-201ENST00000546696 PPFIA3O75145 1194 aa12.91□□□□□ -0.34
AC078880.1-201ENST00000546696 ADH1AP07327 375 aa12.91□□□□□ -0.34
AC078880.1-201ENST00000546696 ADD1P35611 737 aaKnown RBP12.9□□□□□ -0.34
AC078880.1-201ENST00000546696 RNF20Q5VTR2 975 aa12.9□□□□□ -0.34
AC078880.1-201ENST00000546696 PRM3Q9NNZ6 103 aa12.9□□□□□ -0.34
AC078880.1-201ENST00000546696 INSM2Q96T92 566 aaPredicted RBP12.88□□□□□ -0.35
AC078880.1-201ENST00000546696 CYLDQ9NQC7 956 aa12.88□□□□□ -0.35
AC078880.1-201ENST00000546696 CTSOP43234 321 aaPredicted RBP12.87□□□□□ -0.35
AC078880.1-201ENST00000546696 ZSCAN1Q8NBB4 408 aa12.87□□□□□ -0.35
AC078880.1-201ENST00000546696 ZNF395Q9H8N7 513 aaPredicted RBP12.87□□□□□ -0.35
AC078880.1-201ENST00000546696 TBC1D2BQ9UPU7 963 aa12.87□□□□□ -0.35
AC078880.1-201ENST00000546696 PTGIRP43119 386 aa12.86□□□□□ -0.35
AC078880.1-201ENST00000546696 KDF1Q8NAX2 398 aaPredicted RBP12.86□□□□□ -0.35
AC078880.1-201ENST00000546696 VSIG8P0DPA2 414 aa12.85□□□□□ -0.35
AC078880.1-201ENST00000546696 PTSQ03393 145 aa12.85□□□□□ -0.35
AC078880.1-201ENST00000546696 POLMQ9NP87 494 aaPredicted RBP12.85□□□□□ -0.35
AC078880.1-201ENST00000546696 ERVK-9P63128 1117 aa12.82□□□□□ -0.36
AC078880.1-201ENST00000546696 CC2D2BQ6DHV5 1058 aa12.81□□□□□ -0.36
AC078880.1-201ENST00000546696 GPR161Q8N6U8 529 aaKnown RBP12.81□□□□□ -0.36
AC078880.1-201ENST00000546696 RNF217Q8TC41 542 aa12.81□□□□□ -0.36
AC078880.1-201ENST00000546696 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
AC078880.1-201ENST00000546696 IRF5Q13568 498 aa12.79□□□□□ -0.36
AC078880.1-201ENST00000546696 PCDHB11Q9Y5F2 797 aa12.79□□□□□ -0.36
AC078880.1-201ENST00000546696 EIF4G2P78344 907 aaKnown RBP eCLIP12.78□□□□□ -0.36
AC078880.1-201ENST00000546696 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
AC078880.1-201ENST00000546696 CEP126Q9P2H0 1117 aa12.78□□□□□ -0.36
AC078880.1-201ENST00000546696 SLC35F4A4IF30 521 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms