RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
SOD2-216ENST00000546260 ST7Q9NRC1 585 aa12.35□□□□□ -0.43
SOD2-216ENST00000546260 FYCO1Q9BQS8 1478 aa12.34□□□□□ -0.43
SOD2-216ENST00000546260 CLIP2Q9UDT6 1046 aa12.34□□□□□ -0.43
SOD2-216ENST00000546260 GADD45BO75293 160 aaPredicted RBP12.34□□□□□ -0.43
SOD2-216ENST00000546260 TRIM27P14373 513 aa12.34□□□□□ -0.43
SOD2-216ENST00000546260 FAM177A1Q8N128 213 aaPredicted RBP12.34□□□□□ -0.43
SOD2-216ENST00000546260 UPF3BQ9BZI7 483 aaKnown RBP12.34□□□□□ -0.43
SOD2-216ENST00000546260 TAOK2Q9UL54 1235 aa12.34□□□□□ -0.43
SOD2-216ENST00000546260 MNAT1P51948 309 aa12.33□□□□□ -0.43
SOD2-216ENST00000546260 RNF20Q5VTR2 975 aa12.33□□□□□ -0.43
SOD2-216ENST00000546260 GCC1Q96CN9 775 aa12.33□□□□□ -0.43
SOD2-216ENST00000546260 FEZ2Q9UHY8 353 aaPredicted RBP12.33□□□□□ -0.43
SOD2-216ENST00000546260 ZNF215Q9UL58 517 aaPredicted RBP12.33□□□□□ -0.43
SOD2-216ENST00000546260 CALRP27797 417 aaKnown RBP12.33□□□□□ -0.44
SOD2-216ENST00000546260 CKAP2LQ8IYA6 745 aa12.33□□□□□ -0.44
SOD2-216ENST00000546260 A0A1B0GUL7 405 aa12.33□□□□□ -0.44
SOD2-216ENST00000546260 BLMP54132 1417 aaPredicted RBP12.33□□□□□ -0.44
SOD2-216ENST00000546260 HSP90B2PQ58FF3 399 aa12.33□□□□□ -0.44
SOD2-216ENST00000546260 HSP90AB3PQ58FF7 597 aa12.33□□□□□ -0.44
SOD2-216ENST00000546260 H0YHG0 523 aa12.33□□□□□ -0.44
SOD2-216ENST00000546260 SLU7O95391 586 aaKnown RBP12.33□□□□□ -0.44
SOD2-216ENST00000546260 LRMPQ12912 555 aa12.32□□□□□ -0.44
SOD2-216ENST00000546260 ZSCAN26Q16670 478 aa12.32□□□□□ -0.44
SOD2-216ENST00000546260 SYT10Q6XYQ8 523 aa12.32□□□□□ -0.44
SOD2-216ENST00000546260 KIAA1524Q8TCG1 905 aa12.32□□□□□ -0.44
SOD2-216ENST00000546260 NUCB1Q02818 461 aa12.32□□□□□ -0.44
SOD2-216ENST00000546260 HDAC1Q13547 482 aaPredicted RBP12.32□□□□□ -0.44
SOD2-216ENST00000546260 E2F4Q16254 413 aa12.32□□□□□ -0.44
SOD2-216ENST00000546260 CCDC34Q96HJ3 373 aa12.32□□□□□ -0.44
SOD2-216ENST00000546260 CASQ1P31415 396 aa12.32□□□□□ -0.44
SOD2-216ENST00000546260 SSH1Q8WYL5 1049 aa12.32□□□□□ -0.44
SOD2-216ENST00000546260 SMARCA5O60264 1052 aaPredicted RBP12.31□□□□□ -0.44
SOD2-216ENST00000546260 MLECQ14165 292 aa12.31□□□□□ -0.44
SOD2-216ENST00000546260 TNMDQ9H2S6 317 aa12.31□□□□□ -0.44
SOD2-216ENST00000546260 ZNF622Q969S3 477 aaKnown RBP eCLIP12.31□□□□□ -0.44
SOD2-216ENST00000546260 TMX3Q96JJ7 454 aa12.31□□□□□ -0.44
SOD2-216ENST00000546260 CNPY2Q9Y2B0 182 aa12.31□□□□□ -0.44
SOD2-216ENST00000546260 KIAA1107Q9UPP5 1409 aa12.31□□□□□ -0.44
SOD2-216ENST00000546260 MX1P20591 662 aa12.31□□□□□ -0.44
SOD2-216ENST00000546260 ARHGAP29Q52LW3 1261 aa12.31□□□□□ -0.44
SOD2-216ENST00000546260 MCM2P49736 904 aa12.3□□□□□ -0.44
SOD2-216ENST00000546260 SART3Q15020 963 aaKnown RBP12.3□□□□□ -0.44
SOD2-216ENST00000546260 ICE2Q659A1 982 aa12.3□□□□□ -0.44
SOD2-216ENST00000546260 ANKRD7Q92527 254 aa12.3□□□□□ -0.44
SOD2-216ENST00000546260 NUP62CLQ9H1M0 184 aa12.3□□□□□ -0.44
SOD2-216ENST00000546260 RDXP35241 583 aaKnown RBP12.3□□□□□ -0.44
SOD2-216ENST00000546260 GIMAP7Q8NHV1 300 aa12.3□□□□□ -0.44
SOD2-216ENST00000546260 DNAAF4Q8WXU2 420 aa12.3□□□□□ -0.44
SOD2-216ENST00000546260 ERC2O15083 957 aa12.3□□□□□ -0.44
SOD2-216ENST00000546260 MAP3K11Q16584 847 aa12.3□□□□□ -0.44
SOD2-216ENST00000546260 CT47A1Q5JQC4 288 aaPredicted RBP12.3□□□□□ -0.44
SOD2-216ENST00000546260 CCDC91Q7Z6B0 441 aa12.3□□□□□ -0.44
SOD2-216ENST00000546260 GYS2P54840 703 aa12.29□□□□□ -0.44
SOD2-216ENST00000546260 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
SOD2-216ENST00000546260 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
SOD2-216ENST00000546260 URI1O94763 535 aaPredicted RBP12.29□□□□□ -0.44
SOD2-216ENST00000546260 CAPN2P17655 700 aa12.29□□□□□ -0.44
SOD2-216ENST00000546260 MYO1CO00159 1063 aa12.29□□□□□ -0.44
SOD2-216ENST00000546260 TRIM66O15016 1216 aa12.29□□□□□ -0.44
SOD2-216ENST00000546260 ERO1AQ96HE7 468 aa12.29□□□□□ -0.44
SOD2-216ENST00000546260 MORC2Q9Y6X9 1032 aaPredicted RBP12.29□□□□□ -0.44
SOD2-216ENST00000546260 WDR63Q8IWG1 891 aa12.28□□□□□ -0.44
SOD2-216ENST00000546260 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
SOD2-216ENST00000546260 JRKLQ9Y4A0 524 aa12.28□□□□□ -0.44
SOD2-216ENST00000546260 LUZP1Q86V48 1076 aa12.28□□□□□ -0.44
SOD2-216ENST00000546260 SOX12O15370 315 aa12.28□□□□□ -0.44
SOD2-216ENST00000546260 DHX16O60231 1041 aaKnown RBP12.28□□□□□ -0.44
SOD2-216ENST00000546260 EP400NLQ6ZTU2 488 aa12.28□□□□□ -0.44
SOD2-216ENST00000546260 CREBRFQ8IUR6 639 aa12.28□□□□□ -0.44
SOD2-216ENST00000546260 ERBINQ96RT1 1412 aa12.28□□□□□ -0.44
SOD2-216ENST00000546260 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
SOD2-216ENST00000546260 SKILP12757 684 aa12.28□□□□□ -0.44
SOD2-216ENST00000546260 SYTL4Q96C24 671 aaPredicted RBP12.28□□□□□ -0.44
SOD2-216ENST00000546260 FBXO38Q6PIJ6 1188 aa12.27□□□□□ -0.44
SOD2-216ENST00000546260 MICALL1Q8N3F8 863 aa12.27□□□□□ -0.44
SOD2-216ENST00000546260 ANKRD20A12PQ8NF67 263 aa12.27□□□□□ -0.44
SOD2-216ENST00000546260 TEX14Q8IWB6 1497 aa12.27□□□□□ -0.44
SOD2-216ENST00000546260 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.44
SOD2-216ENST00000546260 TOP2BQ02880 1626 aa12.27□□□□□ -0.45
SOD2-216ENST00000546260 SNW1Q13573 536 aaKnown RBP12.27□□□□□ -0.45
SOD2-216ENST00000546260 CCDC102AQ96A19 550 aa12.27□□□□□ -0.45
SOD2-216ENST00000546260 FMNL2Q96PY5 1086 aa12.27□□□□□ -0.45
SOD2-216ENST00000546260 ERCC6LQ2NKX8 1250 aa12.27□□□□□ -0.45
SOD2-216ENST00000546260 KMT5BQ4FZB7 885 aa12.27□□□□□ -0.45
SOD2-216ENST00000546260 SMC2O95347 1197 aa12.26□□□□□ -0.45
SOD2-216ENST00000546260 UBE2HP62256 183 aa12.26□□□□□ -0.45
SOD2-216ENST00000546260 SPTLC3Q9NUV7 552 aa12.26□□□□□ -0.45
SOD2-216ENST00000546260 FERMT3Q86UX7 667 aa12.26□□□□□ -0.45
SOD2-216ENST00000546260 CCDC171Q6TFL3 1326 aa12.26□□□□□ -0.45
SOD2-216ENST00000546260 DDIT3P35638 169 aa12.25□□□□□ -0.45
SOD2-216ENST00000546260 USP8P40818 1118 aa12.25□□□□□ -0.45
SOD2-216ENST00000546260 FAM200AQ8TCP9 573 aa12.25□□□□□ -0.45
SOD2-216ENST00000546260 CASTP20810 708 aaKnown RBP12.25□□□□□ -0.45
SOD2-216ENST00000546260 MTHFSP49914 203 aa12.25□□□□□ -0.45
SOD2-216ENST00000546260 RRP15Q9Y3B9 282 aaKnown RBP12.25□□□□□ -0.45
SOD2-216ENST00000546260 OAS2P29728 719 aaKnown RBP12.25□□□□□ -0.45
SOD2-216ENST00000546260 MAP2K2P36507 400 aa12.24□□□□□ -0.45
SOD2-216ENST00000546260 SLC20A2Q08357 652 aa12.24□□□□□ -0.45
SOD2-216ENST00000546260 SLC4A10Q6U841 1118 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms