RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 TNNT2P45379 298 aaPredicted RBP23.97■■□□□ 1.43
LYSMD4-210ENST00000545021 XPCQ01831 940 aaPredicted RBP23.97■■□□□ 1.43
LYSMD4-210ENST00000545021 BBXQ8WY36 941 aaPredicted RBP23.97■■□□□ 1.43
LYSMD4-210ENST00000545021 GTPBP4Q9BZE4 634 aaKnown RBP23.96■■□□□ 1.43
LYSMD4-210ENST00000545021 SETD1AO15047 1707 aaKnown RBP23.96■■□□□ 1.43
LYSMD4-210ENST00000545021 KIF20AO95235 890 aa23.96■■□□□ 1.43
LYSMD4-210ENST00000545021 ZNF445P59923 1031 aa23.95■■□□□ 1.43
LYSMD4-210ENST00000545021 TMF1P82094 1093 aa23.95■■□□□ 1.43
LYSMD4-210ENST00000545021 CLEC17AQ6ZS10 378 aa23.95■■□□□ 1.43
LYSMD4-210ENST00000545021 RBM25P49756 843 aaKnown RBP23.95■■□□□ 1.42
LYSMD4-210ENST00000545021 ZKSCAN5Q9Y2L8 839 aa23.95■■□□□ 1.42
LYSMD4-210ENST00000545021 GTF2E1P29083 439 aaPredicted RBP23.94■■□□□ 1.42
LYSMD4-210ENST00000545021 GOLGA6L22H0YM25 854 aa23.94■■□□□ 1.42
LYSMD4-210ENST00000545021 APAF1O14727 1248 aa23.94■■□□□ 1.42
LYSMD4-210ENST00000545021 CCDC146Q8IYE0 955 aa23.92■■□□□ 1.42
LYSMD4-210ENST00000545021 ARID3AQ99856 593 aa23.92■■□□□ 1.42
LYSMD4-210ENST00000545021 HSP90AB1P08238 724 aaKnown RBP23.91■■□□□ 1.42
LYSMD4-210ENST00000545021 NBPF1Q3BBV0 1214 aa23.91■■□□□ 1.42
LYSMD4-210ENST00000545021 PPP4R3BQ5MIZ7 849 aa23.91■■□□□ 1.42
LYSMD4-210ENST00000545021 KNSTRNQ9Y448 316 aa23.91■■□□□ 1.42
LYSMD4-210ENST00000545021 CHGAP10645 457 aaKnown RBP23.9■■□□□ 1.42
LYSMD4-210ENST00000545021 AMER1Q5JTC6 1135 aaPredicted RBP23.9■■□□□ 1.42
LYSMD4-210ENST00000545021 STAC3Q96MF2 364 aa23.9■■□□□ 1.42
LYSMD4-210ENST00000545021 LETM1O95202 739 aaPredicted RBP23.89■■□□□ 1.41
LYSMD4-210ENST00000545021 DDX49Q9Y6V7 483 aaKnown RBP23.89■■□□□ 1.41
LYSMD4-210ENST00000545021 TOM1O60784 492 aa23.86■■□□□ 1.41
LYSMD4-210ENST00000545021 MYOM2P54296 1465 aa23.86■■□□□ 1.41
LYSMD4-210ENST00000545021 ASXL1Q8IXJ9 1541 aa23.85■■□□□ 1.41
LYSMD4-210ENST00000545021 RLBP1P12271 317 aa23.85■■□□□ 1.41
LYSMD4-210ENST00000545021 RARSP54136 660 aaKnown RBP23.85■■□□□ 1.41
LYSMD4-210ENST00000545021 NPC1L1Q9UHC9 1359 aa23.84■■□□□ 1.41
LYSMD4-210ENST00000545021 VGFO15240 615 aaPredicted RBP23.84■■□□□ 1.41
LYSMD4-210ENST00000545021 NRXN1Q9ULB1 1477 aa23.84■■□□□ 1.41
LYSMD4-210ENST00000545021 UBAP1LF5GYI3 381 aa23.83■■□□□ 1.41
LYSMD4-210ENST00000545021 MYRIPQ8NFW9 859 aa23.83■■□□□ 1.41
LYSMD4-210ENST00000545021 SLC26A8Q96RN1 970 aa23.83■■□□□ 1.41
LYSMD4-210ENST00000545021 BCL11BQ9C0K0 894 aaPredicted RBP23.83■■□□□ 1.41
LYSMD4-210ENST00000545021 CCDC39Q9UFE4 941 aa23.83■■□□□ 1.41
LYSMD4-210ENST00000545021 PDIA4P13667 645 aaKnown RBP23.82■■□□□ 1.4
LYSMD4-210ENST00000545021 TMEM94Q12767 1356 aa23.82■■□□□ 1.4
LYSMD4-210ENST00000545021 PTPRUQ92729 1446 aa23.81■■□□□ 1.4
LYSMD4-210ENST00000545021 BAG4O95429 457 aaKnown RBP23.81■■□□□ 1.4
LYSMD4-210ENST00000545021 RBSNQ9H1K0 784 aa23.81■■□□□ 1.4
LYSMD4-210ENST00000545021 KNDC1Q76NI1 1749 aa23.81■■□□□ 1.4
LYSMD4-210ENST00000545021 SSFA2P28290 1259 aa23.81■■□□□ 1.4
LYSMD4-210ENST00000545021 DCCP43146 1447 aa23.8■■□□□ 1.4
LYSMD4-210ENST00000545021 ZSCAN23Q3MJ62 389 aa23.8■■□□□ 1.4
LYSMD4-210ENST00000545021 NAP1L2Q9ULW6 460 aaPredicted RBP23.8■■□□□ 1.4
LYSMD4-210ENST00000545021 PTCH1Q13635 1447 aa23.8■■□□□ 1.4
LYSMD4-210ENST00000545021 WWC1Q8IX03 1113 aa23.79■■□□□ 1.4
LYSMD4-210ENST00000545021 K7ELQ4 463 aaPredicted RBP23.78■■□□□ 1.4
LYSMD4-210ENST00000545021 TAF3Q5VWG9 929 aa23.78■■□□□ 1.4
LYSMD4-210ENST00000545021 FAM135BQ49AJ0 1406 aa23.77■■□□□ 1.4
LYSMD4-210ENST00000545021 TNNQ9UQP3 1299 aa23.76■■□□□ 1.39
LYSMD4-210ENST00000545021 GTF2F1P35269 517 aaKnown RBP eCLIP23.76■■□□□ 1.39
LYSMD4-210ENST00000545021 MVPQ14764 893 aaKnown RBP23.76■■□□□ 1.39
LYSMD4-210ENST00000545021 PRIMPOLQ96LW4 560 aa23.76■■□□□ 1.39
LYSMD4-210ENST00000545021 HDAC1Q13547 482 aaPredicted RBP23.75■■□□□ 1.39
LYSMD4-210ENST00000545021 PROSER2Q86WR7 435 aaPredicted RBP23.75■■□□□ 1.39
LYSMD4-210ENST00000545021 ZNF710Q8N1W2 664 aa23.75■■□□□ 1.39
LYSMD4-210ENST00000545021 KIF2CQ99661 725 aa23.75■■□□□ 1.39
LYSMD4-210ENST00000545021 TMEM51Q9NW97 253 aa23.75■■□□□ 1.39
LYSMD4-210ENST00000545021 CAVIN1Q6NZI2 390 aaKnown RBP23.74■■□□□ 1.39
LYSMD4-210ENST00000545021 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.74■■□□□ 1.39
LYSMD4-210ENST00000545021 MSH6P52701 1360 aa23.74■■□□□ 1.39
LYSMD4-210ENST00000545021 CBX1P83916 185 aa23.73■■□□□ 1.39
LYSMD4-210ENST00000545021 IPO4Q8TEX9 1081 aaKnown RBP23.73■■□□□ 1.39
LYSMD4-210ENST00000545021 TECPR2O15040 1411 aa23.73■■□□□ 1.39
LYSMD4-210ENST00000545021 METP08581 1390 aa23.73■■□□□ 1.39
LYSMD4-210ENST00000545021 PRIM1P49642 420 aaKnown RBP23.73■■□□□ 1.39
LYSMD4-210ENST00000545021 HMGN5P82970 282 aaKnown RBP23.72■■□□□ 1.39
LYSMD4-210ENST00000545021 KIAA2012Q0VF49 1180 aa23.72■■□□□ 1.39
LYSMD4-210ENST00000545021 CD2BP2O95400 341 aaKnown RBP23.71■■□□□ 1.39
LYSMD4-210ENST00000545021 LMBRD1Q9NUN5 540 aa23.71■■□□□ 1.39
LYSMD4-210ENST00000545021 FOXD4L1Q9NU39 408 aa23.7■■□□□ 1.38
LYSMD4-210ENST00000545021 GAS2L2Q8NHY3 880 aa23.69■■□□□ 1.38
LYSMD4-210ENST00000545021 AMOTL2Q9Y2J4 779 aa23.69■■□□□ 1.38
LYSMD4-210ENST00000545021 ATP2B3Q16720 1220 aa23.68■■□□□ 1.38
LYSMD4-210ENST00000545021 NUTM2DQ5VT03 806 aaPredicted RBP23.68■■□□□ 1.38
LYSMD4-210ENST00000545021 ADGRL3Q9HAR2 1447 aa23.68■■□□□ 1.38
LYSMD4-210ENST00000545021 CDCA8Q53HL2 280 aa23.68■■□□□ 1.38
LYSMD4-210ENST00000545021 NALCNQ8IZF0 1738 aa23.67■■□□□ 1.38
LYSMD4-210ENST00000545021 MCTP1Q6DN14 999 aa23.67■■□□□ 1.38
LYSMD4-210ENST00000545021 ROBO1Q9Y6N7 1651 aa23.67■■□□□ 1.38
LYSMD4-210ENST00000545021 NUCB2P80303 420 aa23.66■■□□□ 1.38
LYSMD4-210ENST00000545021 LRSAM1Q6UWE0 723 aa23.66■■□□□ 1.38
LYSMD4-210ENST00000545021 CHMP4BQ9H444 224 aaKnown RBP23.66■■□□□ 1.38
LYSMD4-210ENST00000545021 RGL3Q3MIN7 710 aa23.65■■□□□ 1.38
LYSMD4-210ENST00000545021 MYOM1P52179 1685 aa23.65■■□□□ 1.38
LYSMD4-210ENST00000545021 KIAA1210Q9ULL0 1709 aa23.64■■□□□ 1.38
LYSMD4-210ENST00000545021 CYP2E1P05181 493 aaPredicted RBP23.64■■□□□ 1.37
LYSMD4-210ENST00000545021 AHDC1Q5TGY3 1603 aaPredicted RBP23.64■■□□□ 1.37
LYSMD4-210ENST00000545021 DLC1Q96QB1 1528 aa23.64■■□□□ 1.37
LYSMD4-210ENST00000545021 WDR63Q8IWG1 891 aa23.63■■□□□ 1.37
LYSMD4-210ENST00000545021 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
LYSMD4-210ENST00000545021 ZKSCAN2Q63HK3 967 aa23.63■■□□□ 1.37
LYSMD4-210ENST00000545021 DZIP1LQ8IYY4 767 aaKnown RBP23.63■■□□□ 1.37
LYSMD4-210ENST00000545021 BCL2L13Q9BXK5 485 aa23.63■■□□□ 1.37
LYSMD4-210ENST00000545021 SIRT1Q96EB6 747 aa23.62■■□□□ 1.37
LYSMD4-210ENST00000545021 C19orf44Q9H6X5 657 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms