RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 USP54Q70EL1 1684 aa27.99■■■□□ 2.07
CACNA1C-230ENST00000543114 PARD3Q8TEW0 1356 aa27.99■■■□□ 2.07
CACNA1C-230ENST00000543114 CD163L1Q9NR16 1453 aa27.98■■■□□ 2.07
CACNA1C-230ENST00000543114 R3HDM1Q15032 1099 aaKnown RBP27.98■■■□□ 2.07
CACNA1C-230ENST00000543114 TONSLQ96HA7 1378 aa27.98■■■□□ 2.07
CACNA1C-230ENST00000543114 SBF2Q86WG5 1849 aa27.97■■■□□ 2.07
CACNA1C-230ENST00000543114 SOX12O15370 315 aa27.97■■■□□ 2.07
CACNA1C-230ENST00000543114 ARHGEF25Q86VW2 580 aa27.97■■■□□ 2.07
CACNA1C-230ENST00000543114 WDR17Q8IZU2 1322 aa27.96■■■□□ 2.07
CACNA1C-230ENST00000543114 OVOS2A0A0G2JMS6 1433 aa27.96■■■□□ 2.07
CACNA1C-230ENST00000543114 OVOS2A0A0J9YW53 1432 aa27.96■■■□□ 2.07
CACNA1C-230ENST00000543114 OVOS2Q6IE36 1432 aa27.96■■■□□ 2.07
CACNA1C-230ENST00000543114 KCNH5Q8NCM2 988 aa27.96■■■□□ 2.07
CACNA1C-230ENST00000543114 TOM1L2Q6ZVM7 507 aa27.95■■■□□ 2.06
CACNA1C-230ENST00000543114 ABCC6O95255 1503 aa27.94■■■□□ 2.06
CACNA1C-230ENST00000543114 RGPD3A6NKT7 1758 aaPredicted RBP27.91■■■□□ 2.06
CACNA1C-230ENST00000543114 RGPD4Q7Z3J3 1758 aa27.91■■■□□ 2.06
CACNA1C-230ENST00000543114 LTN1O94822 1766 aa27.91■■■□□ 2.06
CACNA1C-230ENST00000543114 USP31Q70CQ4 1352 aa27.89■■■□□ 2.06
CACNA1C-230ENST00000543114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.89■■■□□ 2.06
CACNA1C-230ENST00000543114 DDB1Q16531 1140 aa27.88■■■□□ 2.05
CACNA1C-230ENST00000543114 NME9Q86XW9 330 aa27.86■■■□□ 2.05
CACNA1C-230ENST00000543114 TMC1Q8TDI8 760 aa27.86■■■□□ 2.05
CACNA1C-230ENST00000543114 C11orf95C9JLR9 678 aaPredicted RBP27.85■■■□□ 2.05
CACNA1C-230ENST00000543114 CSB-PGBD3P0DP91 1061 aa27.85■■■□□ 2.05
CACNA1C-230ENST00000543114 CARD10Q9BWT7 1032 aa27.85■■■□□ 2.05
CACNA1C-230ENST00000543114 A0A1W2PP64 1363 aa27.85■■■□□ 2.05
CACNA1C-230ENST00000543114 EDC4Q6P2E9 1401 aaKnown RBP27.84■■■□□ 2.05
CACNA1C-230ENST00000543114 SLC12A5Q9H2X9 1139 aa27.84■■■□□ 2.05
CACNA1C-230ENST00000543114 CDCA7Q9BWT1 371 aaPredicted RBP27.82■■■□□ 2.04
CACNA1C-230ENST00000543114 HDGFL2Q7Z4V5 671 aaPredicted RBP27.81■■■□□ 2.04
CACNA1C-230ENST00000543114 MARCH10Q8NA82 808 aaPredicted RBP27.81■■■□□ 2.04
CACNA1C-230ENST00000543114 BCL9O00512 1426 aa27.81■■■□□ 2.04
CACNA1C-230ENST00000543114 PTF1AQ7RTS3 328 aa27.8■■■□□ 2.04
CACNA1C-230ENST00000543114 CCDC7Q96M83 1385 aa27.8■■■□□ 2.04
CACNA1C-230ENST00000543114 TNS2Q63HR2 1409 aa27.8■■■□□ 2.04
CACNA1C-230ENST00000543114 ERBB3P21860 1342 aa27.79■■■□□ 2.04
CACNA1C-230ENST00000543114 TESK2Q96S53 571 aa27.78■■■□□ 2.04
CACNA1C-230ENST00000543114 NBPF14Q5TI25 921 aa27.76■■■□□ 2.03
CACNA1C-230ENST00000543114 PUS7Q96PZ0 661 aaKnown RBP27.76■■■□□ 2.03
CACNA1C-230ENST00000543114 TERF2IPQ9NYB0 399 aa27.76■■■□□ 2.03
CACNA1C-230ENST00000543114 ST20-MTHFSA0A0A6YYL1 179 aa27.75■■■□□ 2.03
CACNA1C-230ENST00000543114 BCL11BQ9C0K0 894 aaPredicted RBP27.75■■■□□ 2.03
CACNA1C-230ENST00000543114 PLSCR1O15162 318 aa27.74■■■□□ 2.03
CACNA1C-230ENST00000543114 NINLQ9Y2I6 1382 aa27.73■■■□□ 2.03
CACNA1C-230ENST00000543114 NHSQ6T4R5 1651 aa27.72■■■□□ 2.03
CACNA1C-230ENST00000543114 TRIM26Q12899 539 aaPredicted RBP27.71■■■□□ 2.03
CACNA1C-230ENST00000543114 CASZ1Q86V15 1759 aa27.71■■■□□ 2.03
CACNA1C-230ENST00000543114 EXOC5O00471 708 aa27.7■■■□□ 2.02
CACNA1C-230ENST00000543114 ANO8Q9HCE9 1232 aaPredicted RBP27.7■■■□□ 2.02
CACNA1C-230ENST00000543114 NLRP2Q9NX02 1062 aa27.7■■■□□ 2.02
CACNA1C-230ENST00000543114 FAM208AQ9UK61 1670 aaKnown RBP27.7■■■□□ 2.02
CACNA1C-230ENST00000543114 ANKRD24Q8TF21 1146 aa27.69■■■□□ 2.02
CACNA1C-230ENST00000543114 PROM2Q8N271 834 aa27.66■■■□□ 2.02
CACNA1C-230ENST00000543114 USP47Q96K76 1375 aa27.64■■■□□ 2.02
CACNA1C-230ENST00000543114 IL2RBP14784 551 aa27.64■■■□□ 2.02
CACNA1C-230ENST00000543114 ANKRD36BQ8N2N9 1353 aa27.63■■■□□ 2.01
CACNA1C-230ENST00000543114 BTAF1O14981 1849 aa27.62■■■□□ 2.01
CACNA1C-230ENST00000543114 KCNQ2O43526 872 aa27.62■■■□□ 2.01
CACNA1C-230ENST00000543114 RGPD2P0DJD1 1756 aa27.61■■■□□ 2.01
CACNA1C-230ENST00000543114 IP6K1Q92551 441 aa27.61■■■□□ 2.01
CACNA1C-230ENST00000543114 SLC24A1O60721 1099 aa27.6■■■□□ 2.01
CACNA1C-230ENST00000543114 SPON1Q9HCB6 807 aa27.6■■■□□ 2.01
CACNA1C-230ENST00000543114 TXNRD1Q16881 649 aa27.59■■■□□ 2.01
CACNA1C-230ENST00000543114 ACSBG1Q96GR2 724 aa27.59■■■□□ 2.01
CACNA1C-230ENST00000543114 COG3Q96JB2 828 aa27.59■■■□□ 2.01
CACNA1C-230ENST00000543114 MAP3K19Q56UN5 1328 aa27.59■■■□□ 2.01
CACNA1C-230ENST00000543114 KIF20BQ96Q89 1820 aa27.57■■■□□ 2
CACNA1C-230ENST00000543114 PAPPAQ13219 1627 aa27.57■■■□□ 2
CACNA1C-230ENST00000543114 KAT6BQ8WYB5 2073 aa27.57■■■□□ 2
CACNA1C-230ENST00000543114 LTV1Q96GA3 475 aaPredicted RBP27.57■■■□□ 2
CACNA1C-230ENST00000543114 PDGFDQ9GZP0 370 aaPredicted RBP27.57■■■□□ 2
CACNA1C-230ENST00000543114 MYOM1P52179 1685 aa27.56■■■□□ 2
CACNA1C-230ENST00000543114 SHANK3Q9BYB0 1731 aa27.56■■■□□ 2
CACNA1C-230ENST00000543114 FBLN1P23142 703 aa27.56■■■□□ 2
CACNA1C-230ENST00000543114 HOXC9P31274 260 aa27.55■■■□□ 2
CACNA1C-230ENST00000543114 TMF1P82094 1093 aa27.55■■■□□ 2
CACNA1C-230ENST00000543114 PPP1R1BQ9UD71 204 aaPredicted RBP27.53■■■□□ 2
CACNA1C-230ENST00000543114 DOT1LQ8TEK3 1739 aa27.52■■■□□ 2
CACNA1C-230ENST00000543114 RTL1A6NKG5 1358 aa27.51■■□□□ 1.99
CACNA1C-230ENST00000543114 STK32BQ9NY57 414 aa27.51■■□□□ 1.99
CACNA1C-230ENST00000543114 AMPHP49418 695 aa27.5■■□□□ 1.99
CACNA1C-230ENST00000543114 GGNBP2Q9H3C7 697 aa27.5■■□□□ 1.99
CACNA1C-230ENST00000543114 MEGF6O75095 1541 aa27.5■■□□□ 1.99
CACNA1C-230ENST00000543114 FYB1O15117 783 aa27.49■■□□□ 1.99
CACNA1C-230ENST00000543114 SLC15A2Q16348 729 aa27.49■■□□□ 1.99
CACNA1C-230ENST00000543114 ZBTB7AO95365 584 aa27.48■■□□□ 1.99
CACNA1C-230ENST00000543114 RRS1Q15050 365 aaKnown RBP27.48■■□□□ 1.99
CACNA1C-230ENST00000543114 DDX54Q8TDD1 881 aaKnown RBP27.46■■□□□ 1.99
CACNA1C-230ENST00000543114 PTGER2P43116 358 aa27.43■■□□□ 1.98
CACNA1C-230ENST00000543114 CDCA8Q53HL2 280 aa27.42■■□□□ 1.98
CACNA1C-230ENST00000543114 LRRC4BQ9NT99 713 aa27.41■■□□□ 1.98
CACNA1C-230ENST00000543114 ATF5Q9Y2D1 282 aaPredicted RBP27.41■■□□□ 1.98
CACNA1C-230ENST00000543114 SMG6Q86US8 1419 aaKnown RBP27.41■■□□□ 1.98
CACNA1C-230ENST00000543114 NSD3Q9BZ95 1437 aa27.41■■□□□ 1.98
CACNA1C-230ENST00000543114 ZNF827Q17R98 1081 aa27.4■■□□□ 1.98
CACNA1C-230ENST00000543114 LY75O60449 1722 aa27.4■■□□□ 1.98
CACNA1C-230ENST00000543114 TUBGCP6Q96RT7 1819 aa27.39■■□□□ 1.98
CACNA1C-230ENST00000543114 QSER1Q2KHR3 1735 aa27.39■■□□□ 1.98
CACNA1C-230ENST00000543114 NSD2O96028 1365 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms