RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
CALU-206ENST00000542996 NUTM2FA1L443 756 aa13.65□□□□□ -0.22
CALU-206ENST00000542996 COL9A3Q14050 684 aaPredicted RBP13.65□□□□□ -0.22
CALU-206ENST00000542996 MLECQ14165 292 aa13.65□□□□□ -0.22
CALU-206ENST00000542996 ATF7IPQ6VMQ6 1270 aa13.65□□□□□ -0.22
CALU-206ENST00000542996 IL25Q9H293 177 aa13.65□□□□□ -0.22
CALU-206ENST00000542996 MIS18AQ9NYP9 233 aa13.65□□□□□ -0.22
CALU-206ENST00000542996 PIK3C2AO00443 1686 aa13.65□□□□□ -0.22
CALU-206ENST00000542996 MRPL50Q8N5N7 158 aaKnown RBP13.65□□□□□ -0.22
CALU-206ENST00000542996 CEBPAP49715 358 aaPredicted RBP13.64□□□□□ -0.23
CALU-206ENST00000542996 SETD1BQ9UPS6 1966 aaKnown RBP13.63□□□□□ -0.23
CALU-206ENST00000542996 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
CALU-206ENST00000542996 GSE1Q14687 1217 aa13.63□□□□□ -0.23
CALU-206ENST00000542996 DZIP1LQ8IYY4 767 aaKnown RBP13.63□□□□□ -0.23
CALU-206ENST00000542996 PUS7Q96PZ0 661 aaKnown RBP13.63□□□□□ -0.23
CALU-206ENST00000542996 FAM69CQ0P6D2 419 aa13.63□□□□□ -0.23
CALU-206ENST00000542996 PKP1Q13835 747 aa13.63□□□□□ -0.23
CALU-206ENST00000542996 RIMS2Q9UQ26 1411 aa13.63□□□□□ -0.23
CALU-206ENST00000542996 RRAGDQ9NQL2 400 aaPredicted RBP13.63□□□□□ -0.23
CALU-206ENST00000542996 REREQ9P2R6 1566 aa13.62□□□□□ -0.23
CALU-206ENST00000542996 PPM1GO15355 546 aaPredicted RBP13.62□□□□□ -0.23
CALU-206ENST00000542996 HSP90AB2PQ58FF8 381 aa13.62□□□□□ -0.23
CALU-206ENST00000542996 GAS2L3Q86XJ1 694 aa13.62□□□□□ -0.23
CALU-206ENST00000542996 LNPKQ9C0E8 428 aa13.62□□□□□ -0.23
CALU-206ENST00000542996 HDAC1Q13547 482 aaPredicted RBP13.61□□□□□ -0.23
CALU-206ENST00000542996 DTNBO60941 627 aa13.61□□□□□ -0.23
CALU-206ENST00000542996 PTCH1Q13635 1447 aa13.61□□□□□ -0.23
CALU-206ENST00000542996 FMN2Q9NZ56 1722 aa13.61□□□□□ -0.23
CALU-206ENST00000542996 SMC4Q9NTJ3 1288 aa13.61□□□□□ -0.23
CALU-206ENST00000542996 SLC52A1Q9NWF4 448 aa13.61□□□□□ -0.23
CALU-206ENST00000542996 NUCB1Q02818 461 aa13.6□□□□□ -0.23
CALU-206ENST00000542996 G2E3Q7L622 706 aa13.6□□□□□ -0.23
CALU-206ENST00000542996 NSD2O96028 1365 aa13.6□□□□□ -0.23
CALU-206ENST00000542996 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.6□□□□□ -0.23
CALU-206ENST00000542996 ITSN1Q15811 1721 aa13.6□□□□□ -0.23
CALU-206ENST00000542996 XRN1Q8IZH2 1706 aaKnown RBP13.6□□□□□ -0.23
CALU-206ENST00000542996 AGLP35573 1532 aa13.59□□□□□ -0.23
CALU-206ENST00000542996 CRB1P82279 1406 aa13.59□□□□□ -0.23
CALU-206ENST00000542996 MCM10Q7L590 875 aa13.59□□□□□ -0.23
CALU-206ENST00000542996 ERBB4Q15303 1308 aa13.59□□□□□ -0.23
CALU-206ENST00000542996 RBM33Q96EV2 1170 aaKnown RBP13.59□□□□□ -0.23
CALU-206ENST00000542996 OVOS2A0A0J9YW53 1432 aa13.59□□□□□ -0.23
CALU-206ENST00000542996 OVOS2Q6IE36 1432 aa13.59□□□□□ -0.23
CALU-206ENST00000542996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.59□□□□□ -0.23
CALU-206ENST00000542996 ABCC4O15439 1325 aa13.58□□□□□ -0.23
CALU-206ENST00000542996 EIF4A2Q14240 407 aaKnown RBP13.58□□□□□ -0.24
CALU-206ENST00000542996 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
CALU-206ENST00000542996 ZKSCAN2Q63HK3 967 aa13.57□□□□□ -0.24
CALU-206ENST00000542996 TECPR2O15040 1411 aa13.57□□□□□ -0.24
CALU-206ENST00000542996 ZMYM3Q14202 1370 aa13.57□□□□□ -0.24
CALU-206ENST00000542996 DIAPH1O60610 1272 aaKnown RBP13.57□□□□□ -0.24
CALU-206ENST00000542996 ITPRIPQ8IWB1 547 aa13.57□□□□□ -0.24
CALU-206ENST00000542996 TCHHQ07283 1943 aa13.56□□□□□ -0.24
CALU-206ENST00000542996 CDK12Q9NYV4 1490 aaPredicted RBP13.56□□□□□ -0.24
CALU-206ENST00000542996 TSHZ3Q63HK5 1081 aa13.56□□□□□ -0.24
CALU-206ENST00000542996 NUDT16Q96DE0 195 aaKnown RBP13.56□□□□□ -0.24
CALU-206ENST00000542996 SMARCA5O60264 1052 aaPredicted RBP13.55□□□□□ -0.24
CALU-206ENST00000542996 MFAP1P55081 439 aaKnown RBP13.54□□□□□ -0.24
CALU-206ENST00000542996 LRRC37A3O60309 1634 aa13.54□□□□□ -0.24
CALU-206ENST00000542996 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
CALU-206ENST00000542996 XRCC6P12956 609 aaKnown RBP eCLIP13.54□□□□□ -0.24
CALU-206ENST00000542996 BRPF1P55201 1214 aaPredicted RBP13.54□□□□□ -0.24
CALU-206ENST00000542996 FSD2A1L4K1 749 aa13.53□□□□□ -0.24
CALU-206ENST00000542996 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
CALU-206ENST00000542996 FAM208AQ9UK61 1670 aaKnown RBP13.53□□□□□ -0.24
CALU-206ENST00000542996 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
CALU-206ENST00000542996 FCHSD2O94868 740 aa13.52□□□□□ -0.24
CALU-206ENST00000542996 NFE2L2Q16236 605 aa13.52□□□□□ -0.24
CALU-206ENST00000542996 TBC1D9Q6ZT07 1266 aa13.52□□□□□ -0.24
CALU-206ENST00000542996 EDC4Q6P2E9 1401 aaKnown RBP13.52□□□□□ -0.24
CALU-206ENST00000542996 SLC26A8Q96RN1 970 aa13.52□□□□□ -0.25
CALU-206ENST00000542996 GAS2L2Q8NHY3 880 aa13.51□□□□□ -0.25
CALU-206ENST00000542996 NINLQ9Y2I6 1382 aa13.51□□□□□ -0.25
CALU-206ENST00000542996 PLEKHM2Q8IWE5 1019 aa13.51□□□□□ -0.25
CALU-206ENST00000542996 ZDHHC9Q9Y397 364 aa13.51□□□□□ -0.25
CALU-206ENST00000542996 F6X3S4 739 aa13.51□□□□□ -0.25
CALU-206ENST00000542996 MEIS3Q99687 375 aa13.51□□□□□ -0.25
CALU-206ENST00000542996 IL16Q14005 1332 aa13.51□□□□□ -0.25
CALU-206ENST00000542996 CHD1LQ86WJ1 897 aa13.5□□□□□ -0.25
CALU-206ENST00000542996 C22orf23Q9BZE7 217 aa13.5□□□□□ -0.25
CALU-206ENST00000542996 RBM25P49756 843 aaKnown RBP13.5□□□□□ -0.25
CALU-206ENST00000542996 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
CALU-206ENST00000542996 NSFL1CQ9UNZ2 370 aaKnown RBP13.5□□□□□ -0.25
CALU-206ENST00000542996 ACEP12821 1306 aa13.5□□□□□ -0.25
CALU-206ENST00000542996 MSH6P52701 1360 aa13.5□□□□□ -0.25
CALU-206ENST00000542996 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.5□□□□□ -0.25
CALU-206ENST00000542996 SALL3Q9BXA9 1300 aa13.49□□□□□ -0.25
CALU-206ENST00000542996 MAPK8IP3Q9UPT6 1336 aa13.49□□□□□ -0.25
CALU-206ENST00000542996 NPM1P06748 294 aaKnown RBP eCLIP13.49□□□□□ -0.25
CALU-206ENST00000542996 UNC5CLQ8IV45 518 aa13.49□□□□□ -0.25
CALU-206ENST00000542996 AATKQ6ZMQ8 1374 aa13.49□□□□□ -0.25
CALU-206ENST00000542996 SOX12O15370 315 aa13.48□□□□□ -0.25
CALU-206ENST00000542996 CANXP27824 592 aaKnown RBP13.48□□□□□ -0.25
CALU-206ENST00000542996 MTHFSDQ2M296 383 aaKnown RBP13.48□□□□□ -0.25
CALU-206ENST00000542996 MYH16Q9H6N6 1097 aa13.48□□□□□ -0.25
CALU-206ENST00000542996 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
CALU-206ENST00000542996 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
CALU-206ENST00000542996 GZF1Q9H116 711 aaPredicted RBP13.47□□□□□ -0.25
CALU-206ENST00000542996 RGPD5Q99666 1765 aa13.47□□□□□ -0.25
CALU-206ENST00000542996 USP6P35125 1406 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms