RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 MARCH10Q8NA82 808 aaPredicted RBP12.87□□□□□ -0.35
UBC-211ENST00000542416 ANO8Q9HCE9 1232 aaPredicted RBP12.87□□□□□ -0.35
UBC-211ENST00000542416 PROM2Q8N271 834 aa12.86□□□□□ -0.35
UBC-211ENST00000542416 AXIN2Q9Y2T1 843 aa12.86□□□□□ -0.35
UBC-211ENST00000542416 TTC21AQ8NDW8 1320 aa12.86□□□□□ -0.35
UBC-211ENST00000542416 NUP188Q5SRE5 1749 aa12.85□□□□□ -0.35
UBC-211ENST00000542416 PARP4Q9UKK3 1724 aaKnown RBP12.85□□□□□ -0.35
UBC-211ENST00000542416 SLC15A2Q16348 729 aa12.85□□□□□ -0.35
UBC-211ENST00000542416 TXNRD1Q16881 649 aa12.85□□□□□ -0.35
UBC-211ENST00000542416 KIAA1210Q9ULL0 1709 aa12.85□□□□□ -0.35
UBC-211ENST00000542416 CCDC7Q96M83 1385 aa12.84□□□□□ -0.35
UBC-211ENST00000542416 SLIT3O75094 1523 aa12.84□□□□□ -0.35
UBC-211ENST00000542416 ZBTB7AO95365 584 aa12.84□□□□□ -0.35
UBC-211ENST00000542416 MTFR1LQ9H019 292 aa12.84□□□□□ -0.35
UBC-211ENST00000542416 CPSF1Q10570 1443 aaKnown RBP12.84□□□□□ -0.35
UBC-211ENST00000542416 TTC21BQ7Z4L5 1316 aa12.84□□□□□ -0.35
UBC-211ENST00000542416 PTGER2P43116 358 aa12.83□□□□□ -0.36
UBC-211ENST00000542416 PTF1AQ7RTS3 328 aa12.82□□□□□ -0.36
UBC-211ENST00000542416 SYT17Q9BSW7 474 aa12.82□□□□□ -0.36
UBC-211ENST00000542416 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
UBC-211ENST00000542416 RGPD3A6NKT7 1758 aaPredicted RBP12.81□□□□□ -0.36
UBC-211ENST00000542416 RGPD4Q7Z3J3 1758 aa12.81□□□□□ -0.36
UBC-211ENST00000542416 PEAK1Q9H792 1746 aa12.8□□□□□ -0.36
UBC-211ENST00000542416 SOX12O15370 315 aa12.8□□□□□ -0.36
UBC-211ENST00000542416 ZNF784Q8NCA9 323 aaPredicted RBP12.8□□□□□ -0.36
UBC-211ENST00000542416 FHDC1Q9C0D6 1143 aaPredicted RBP12.8□□□□□ -0.36
UBC-211ENST00000542416 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
UBC-211ENST00000542416 L3MBTL2Q969R5 705 aa12.79□□□□□ -0.36
UBC-211ENST00000542416 LRRC37A3O60309 1634 aa12.78□□□□□ -0.36
UBC-211ENST00000542416 IL2RBP14784 551 aa12.78□□□□□ -0.36
UBC-211ENST00000542416 ARXQ96QS3 562 aa12.78□□□□□ -0.36
UBC-211ENST00000542416 KTN1Q86UP2 1357 aaKnown RBP12.78□□□□□ -0.36
UBC-211ENST00000542416 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.37
UBC-211ENST00000542416 NLRP2Q9NX02 1062 aa12.77□□□□□ -0.37
UBC-211ENST00000542416 ROCK2O75116 1388 aaKnown RBP12.77□□□□□ -0.37
UBC-211ENST00000542416 TNS2Q63HR2 1409 aa12.77□□□□□ -0.37
UBC-211ENST00000542416 ABCC6O95255 1503 aa12.77□□□□□ -0.37
UBC-211ENST00000542416 SLC16A10Q8TF71 515 aa12.76□□□□□ -0.37
UBC-211ENST00000542416 ERBB3P21860 1342 aa12.76□□□□□ -0.37
UBC-211ENST00000542416 MAP3K5Q99683 1374 aa12.76□□□□□ -0.37
UBC-211ENST00000542416 USP31Q70CQ4 1352 aa12.75□□□□□ -0.37
UBC-211ENST00000542416 ACSBG1Q96GR2 724 aa12.75□□□□□ -0.37
UBC-211ENST00000542416 CASZ1Q86V15 1759 aa12.74□□□□□ -0.37
UBC-211ENST00000542416 POLD1P28340 1107 aa12.74□□□□□ -0.37
UBC-211ENST00000542416 SLC27A3Q5K4L6 730 aa12.74□□□□□ -0.37
UBC-211ENST00000542416 HDGFL2Q7Z4V5 671 aaPredicted RBP12.74□□□□□ -0.37
UBC-211ENST00000542416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
UBC-211ENST00000542416 COL18A1P39060 1754 aa12.74□□□□□ -0.37
UBC-211ENST00000542416 PIK3C2AO00443 1686 aa12.73□□□□□ -0.37
UBC-211ENST00000542416 QRICH2Q9H0J4 1663 aa12.73□□□□□ -0.37
UBC-211ENST00000542416 TRPM1Q7Z4N2 1603 aa12.73□□□□□ -0.37
UBC-211ENST00000542416 SBNO2Q9Y2G9 1366 aa12.72□□□□□ -0.37
UBC-211ENST00000542416 HMGB2P26583 209 aaKnown RBP12.72□□□□□ -0.37
UBC-211ENST00000542416 C1QTNF8P60827 252 aa12.72□□□□□ -0.37
UBC-211ENST00000542416 GPR162Q16538 588 aa12.72□□□□□ -0.37
UBC-211ENST00000542416 ANKRD24Q8TF21 1146 aa12.72□□□□□ -0.37
UBC-211ENST00000542416 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
UBC-211ENST00000542416 NFAT5O94916 1531 aa12.72□□□□□ -0.37
UBC-211ENST00000542416 SBF2Q86WG5 1849 aa12.72□□□□□ -0.37
UBC-211ENST00000542416 UTRNP46939 3433 aa12.71□□□□□ -0.37
UBC-211ENST00000542416 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
UBC-211ENST00000542416 NME9Q86XW9 330 aa12.7□□□□□ -0.38
UBC-211ENST00000542416 TMC1Q8TDI8 760 aa12.7□□□□□ -0.38
UBC-211ENST00000542416 PUS7Q96PZ0 661 aaKnown RBP12.7□□□□□ -0.38
UBC-211ENST00000542416 ZNF827Q17R98 1081 aa12.69□□□□□ -0.38
UBC-211ENST00000542416 IP6K1Q92551 441 aa12.69□□□□□ -0.38
UBC-211ENST00000542416 AKT1S1Q96B36 256 aa12.69□□□□□ -0.38
UBC-211ENST00000542416 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
UBC-211ENST00000542416 TFCP2L1Q9NZI6 479 aa12.69□□□□□ -0.38
UBC-211ENST00000542416 MYOM1P52179 1685 aa12.68□□□□□ -0.38
UBC-211ENST00000542416 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
UBC-211ENST00000542416 NEUROD1Q13562 356 aa12.68□□□□□ -0.38
UBC-211ENST00000542416 DDX54Q8TDD1 881 aaKnown RBP12.68□□□□□ -0.38
UBC-211ENST00000542416 EDC4Q6P2E9 1401 aaKnown RBP12.68□□□□□ -0.38
UBC-211ENST00000542416 AKAP12Q02952 1782 aa12.67□□□□□ -0.38
UBC-211ENST00000542416 GIGYF1O75420 1035 aaPredicted RBP12.67□□□□□ -0.38
UBC-211ENST00000542416 SIN3AQ96ST3 1273 aa12.67□□□□□ -0.38
UBC-211ENST00000542416 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
UBC-211ENST00000542416 SLC12A5Q9H2X9 1139 aa12.67□□□□□ -0.38
UBC-211ENST00000542416 GRIN3BO60391 1043 aa12.66□□□□□ -0.38
UBC-211ENST00000542416 KLHL34Q8N239 644 aa12.66□□□□□ -0.38
UBC-211ENST00000542416 SYTL4Q96C24 671 aaPredicted RBP12.66□□□□□ -0.38
UBC-211ENST00000542416 WNK3Q9BYP7 1800 aa12.65□□□□□ -0.38
UBC-211ENST00000542416 NHSQ6T4R5 1651 aa12.65□□□□□ -0.38
UBC-211ENST00000542416 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
UBC-211ENST00000542416 PNPLA7Q6ZV29 1317 aa12.64□□□□□ -0.39
UBC-211ENST00000542416 PRIM1P49642 420 aaKnown RBP12.64□□□□□ -0.39
UBC-211ENST00000542416 ZCRB1Q8TBF4 217 aaKnown RBP12.64□□□□□ -0.39
UBC-211ENST00000542416 COG3Q96JB2 828 aa12.64□□□□□ -0.39
UBC-211ENST00000542416 ANKRD36BQ8N2N9 1353 aa12.64□□□□□ -0.39
UBC-211ENST00000542416 AMPHP49418 695 aa12.63□□□□□ -0.39
UBC-211ENST00000542416 LTV1Q96GA3 475 aaPredicted RBP12.63□□□□□ -0.39
UBC-211ENST00000542416 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
UBC-211ENST00000542416 CGNL1Q0VF96 1302 aa12.62□□□□□ -0.39
UBC-211ENST00000542416 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
UBC-211ENST00000542416 CD163L1Q9NR16 1453 aa12.62□□□□□ -0.39
UBC-211ENST00000542416 A0A1W2PP64 1363 aa12.61□□□□□ -0.39
UBC-211ENST00000542416 HOXC9P31274 260 aa12.61□□□□□ -0.39
UBC-211ENST00000542416 FLAD1Q8NFF5 587 aa12.61□□□□□ -0.39
UBC-211ENST00000542416 USP47Q96K76 1375 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms