RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ABCC1P33527 1531 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 FAM135AQ9P2D6 1515 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 XIRP1Q702N8 1843 aaKnown RBP4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 ATRNO75882 1429 aa4.04□□□□□ -1.76
TRAV1-1-201ENST00000542354 USP19O94966 1318 aa4.03□□□□□ -1.76
TRAV1-1-201ENST00000542354 UNC13BO14795 1591 aa4.03□□□□□ -1.76
TRAV1-1-201ENST00000542354 KCNA6P17658 529 aa4.03□□□□□ -1.76
TRAV1-1-201ENST00000542354 RGS19P49795 217 aa4.03□□□□□ -1.76
TRAV1-1-201ENST00000542354 CADPS2Q86UW7 1296 aa4.03□□□□□ -1.76
TRAV1-1-201ENST00000542354 RBM46Q8TBY0 533 aaKnown RBP4.03□□□□□ -1.76
TRAV1-1-201ENST00000542354 UGGT2Q9NYU1 1516 aa4.03□□□□□ -1.76
TRAV1-1-201ENST00000542354 ARHGAP23Q9P227 1491 aa4.03□□□□□ -1.76
TRAV1-1-201ENST00000542354 ZPR1O75312 459 aa4.02□□□□□ -1.77
TRAV1-1-201ENST00000542354 DGAT1O75907 488 aa4.02□□□□□ -1.77
TRAV1-1-201ENST00000542354 EZH2Q15910 746 aaKnown RBP4.02□□□□□ -1.77
TRAV1-1-201ENST00000542354 LMOD2Q6P5Q4 547 aa4.02□□□□□ -1.77
TRAV1-1-201ENST00000542354 KRT27Q7Z3Y8 459 aa4.02□□□□□ -1.77
TRAV1-1-201ENST00000542354 PDE4DIPQ5VU43 2346 aa4.02□□□□□ -1.77
TRAV1-1-201ENST00000542354 ZNF518AQ6AHZ1 1483 aa4.02□□□□□ -1.77
TRAV1-1-201ENST00000542354 TNRQ92752 1358 aa4.02□□□□□ -1.77
TRAV1-1-201ENST00000542354 PCNTO95613 3336 aa4.01□□□□□ -1.77
TRAV1-1-201ENST00000542354 SMAPO00193 183 aa4.01□□□□□ -1.77
TRAV1-1-201ENST00000542354 NR1I2O75469 434 aa4.01□□□□□ -1.77
TRAV1-1-201ENST00000542354 HSPA1AP0DMV8 641 aaKnown RBP4.01□□□□□ -1.77
TRAV1-1-201ENST00000542354 HSPA1BP0DMV9 641 aaKnown RBP4.01□□□□□ -1.77
TRAV1-1-201ENST00000542354 DNAJB2P25686 324 aa4.01□□□□□ -1.77
TRAV1-1-201ENST00000542354 SEPT12Q8IYM1 358 aa4.01□□□□□ -1.77
TRAV1-1-201ENST00000542354 ANKLE1Q8NAG6 615 aa4.01□□□□□ -1.77
TRAV1-1-201ENST00000542354 FHDC1Q9C0D6 1143 aaPredicted RBP4.01□□□□□ -1.77
TRAV1-1-201ENST00000542354 PLCH2O75038 1416 aa4.01□□□□□ -1.77
TRAV1-1-201ENST00000542354 CARMIL1Q5VZK9 1371 aa4.01□□□□□ -1.77
TRAV1-1-201ENST00000542354 ABCC3O15438 1527 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 KIF14Q15058 1648 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 AHDC1Q5TGY3 1603 aaPredicted RBP4□□□□□ -1.77
TRAV1-1-201ENST00000542354 PPP1R15AO75807 674 aaPredicted RBP4□□□□□ -1.77
TRAV1-1-201ENST00000542354 SLC19A1P41440 591 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 HNRNPMP52272 730 aaKnown RBP eCLIP4□□□□□ -1.77
TRAV1-1-201ENST00000542354 COPS2P61201 443 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 PRR20EP86478 221 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 PRR20CP86479 221 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 PRR20DP86480 221 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 PRR20BP86481 221 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 PRR20AP86496 221 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 SWT1Q5T5J6 900 aaKnown RBP4□□□□□ -1.77
TRAV1-1-201ENST00000542354 FBXO31Q5XUX0 539 aaPredicted RBP4□□□□□ -1.77
TRAV1-1-201ENST00000542354 GGT6Q6P531 493 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 SETD5Q9C0A6 1442 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 DIP2CQ9Y2E4 1556 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 ATP7AQ04656 1500 aa4□□□□□ -1.77
TRAV1-1-201ENST00000542354 UGGT1Q9NYU2 1555 aa3.99□□□□□ -1.77
TRAV1-1-201ENST00000542354 ATF3P18847 181 aa3.99□□□□□ -1.77
TRAV1-1-201ENST00000542354 ZNF598Q86UK7 904 aaKnown RBP3.99□□□□□ -1.77
TRAV1-1-201ENST00000542354 TXNDC2Q86VQ3 553 aa3.99□□□□□ -1.77
TRAV1-1-201ENST00000542354 P3H3Q8IVL6 736 aa3.99□□□□□ -1.77
TRAV1-1-201ENST00000542354 CAMKK2Q96RR4 588 aa3.99□□□□□ -1.77
TRAV1-1-201ENST00000542354 CUL9Q8IWT3 2517 aa3.99□□□□□ -1.77
TRAV1-1-201ENST00000542354 GOLGA3Q08378 1498 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 MLH3Q9UHC1 1453 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 SHANK3Q9BYB0 1731 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 ATP10DQ9P241 1426 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 GRIN3BO60391 1043 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 TOMM70O94826 608 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 OSBPP22059 807 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 PADI6Q6TGC4 694 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 BRINP3Q76B58 766 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 C14orf37Q86TY3 774 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 ZNF526Q8TF50 670 aaPredicted RBP3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 ZNF516Q92618 1163 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 ABHD8Q96I13 439 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 EID1Q9Y6B2 187 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 PARD3Q8TEW0 1356 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 NLRP1Q9C000 1473 aa3.98□□□□□ -1.77
TRAV1-1-201ENST00000542354 DIP2AQ14689 1571 aa3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 CLTCQ00610 1675 aaKnown RBP3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 ITSN2Q9NZM3 1697 aa3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 DISP2A7MBM2 1401 aa3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 MAP3K1Q13233 1512 aa3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 CCDC85CA6NKD9 419 aa3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 ACTN4O43707 911 aaKnown RBP3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 AMER1Q5JTC6 1135 aaPredicted RBP3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 TTC13Q8NBP0 860 aa3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 ARHGEF1Q92888 912 aaKnown RBP3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 PRDM10Q9NQV6 1147 aa3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 PNPLA6Q8IY17 1366 aa3.97□□□□□ -1.77
TRAV1-1-201ENST00000542354 PTCH1Q13635 1447 aa3.96□□□□□ -1.77
TRAV1-1-201ENST00000542354 MIA2Q96PC5 1412 aa3.96□□□□□ -1.77
TRAV1-1-201ENST00000542354 PRDM15P57071 1507 aaPredicted RBP3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 SPHKAPQ2M3C7 1700 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 ADH1BP00325 375 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 OATP04181 439 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 LTKP29376 864 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 HTRA3P83110 453 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 ZNF697Q5TEC3 545 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 SPRYD7Q5W111 196 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 UNC5CLQ8IV45 518 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 CFAP44Q96MT7 982 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 SLC6A16Q9GZN6 736 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 C19orf44Q9H6X5 657 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 A2MP01023 1474 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms