RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 AKAP12Q02952 1782 aa22.46■■□□□ 1.19
CD4-210ENST00000541982 ANO8Q9HCE9 1232 aaPredicted RBP22.46■■□□□ 1.19
CD4-210ENST00000541982 CABP1Q9NZU7 370 aa22.46■■□□□ 1.19
CD4-210ENST00000541982 WDR17Q8IZU2 1322 aa22.46■■□□□ 1.19
CD4-210ENST00000541982 WNK3Q9BYP7 1800 aa22.45■■□□□ 1.19
CD4-210ENST00000541982 COL18A1P39060 1754 aa22.44■■□□□ 1.18
CD4-210ENST00000541982 QRICH2Q9H0J4 1663 aa22.43■■□□□ 1.18
CD4-210ENST00000541982 PROM2Q8N271 834 aa22.42■■□□□ 1.18
CD4-210ENST00000541982 MARCH10Q8NA82 808 aaPredicted RBP22.42■■□□□ 1.18
CD4-210ENST00000541982 KCNH5Q8NCM2 988 aa22.42■■□□□ 1.18
CD4-210ENST00000541982 STK32BQ9NY57 414 aa22.42■■□□□ 1.18
CD4-210ENST00000541982 ZBTB7AO95365 584 aa22.41■■□□□ 1.18
CD4-210ENST00000541982 AXIN2Q9Y2T1 843 aa22.41■■□□□ 1.18
CD4-210ENST00000541982 PIK3C2AO00443 1686 aa22.4■■□□□ 1.18
CD4-210ENST00000541982 PTF1AQ7RTS3 328 aa22.4■■□□□ 1.18
CD4-210ENST00000541982 CARD10Q9BWT7 1032 aa22.4■■□□□ 1.18
CD4-210ENST00000541982 CPSF1Q10570 1443 aaKnown RBP22.4■■□□□ 1.18
CD4-210ENST00000541982 EXOC5O00471 708 aa22.39■■□□□ 1.17
CD4-210ENST00000541982 CSB-PGBD3P0DP91 1061 aa22.39■■□□□ 1.17
CD4-210ENST00000541982 TXNRD1Q16881 649 aa22.39■■□□□ 1.17
CD4-210ENST00000541982 ARHGEF25Q86VW2 580 aa22.39■■□□□ 1.17
CD4-210ENST00000541982 ZNF692Q9BU19 519 aaPredicted RBP22.39■■□□□ 1.17
CD4-210ENST00000541982 EVC2Q86UK5 1308 aa22.38■■□□□ 1.17
CD4-210ENST00000541982 PTGER2P43116 358 aa22.38■■□□□ 1.17
CD4-210ENST00000541982 PDGFDQ9GZP0 370 aaPredicted RBP22.38■■□□□ 1.17
CD4-210ENST00000541982 MYOM1P52179 1685 aa22.38■■□□□ 1.17
CD4-210ENST00000541982 SLC15A2Q16348 729 aa22.37■■□□□ 1.17
CD4-210ENST00000541982 ATF5Q9Y2D1 282 aaPredicted RBP22.37■■□□□ 1.17
CD4-210ENST00000541982 RGPD5Q99666 1765 aa22.37■■□□□ 1.17
CD4-210ENST00000541982 CCDC7Q96M83 1385 aa22.36■■□□□ 1.17
CD4-210ENST00000541982 MTFR1LQ9H019 292 aa22.35■■□□□ 1.17
CD4-210ENST00000541982 TTC21BQ7Z4L5 1316 aa22.34■■□□□ 1.17
CD4-210ENST00000541982 TTC21AQ8NDW8 1320 aa22.34■■□□□ 1.17
CD4-210ENST00000541982 SYT17Q9BSW7 474 aa22.34■■□□□ 1.17
CD4-210ENST00000541982 CHD4Q14839 1912 aa22.33■■□□□ 1.17
CD4-210ENST00000541982 TRPM1Q7Z4N2 1603 aa22.33■■□□□ 1.17
CD4-210ENST00000541982 ZNF784Q8NCA9 323 aaPredicted RBP22.33■■□□□ 1.17
CD4-210ENST00000541982 FHDC1Q9C0D6 1143 aaPredicted RBP22.33■■□□□ 1.17
CD4-210ENST00000541982 UTRNP46939 3433 aa22.32■■□□□ 1.16
CD4-210ENST00000541982 ABCC6O95255 1503 aa22.31■■□□□ 1.16
CD4-210ENST00000541982 SOX12O15370 315 aa22.31■■□□□ 1.16
CD4-210ENST00000541982 TNS2Q63HR2 1409 aa22.31■■□□□ 1.16
CD4-210ENST00000541982 NHSQ6T4R5 1651 aa22.29■■□□□ 1.16
CD4-210ENST00000541982 NFAT5O94916 1531 aa22.27■■□□□ 1.16
CD4-210ENST00000541982 SGIP1Q9BQI5 828 aa22.27■■□□□ 1.16
CD4-210ENST00000541982 KAT6BQ8WYB5 2073 aa22.26■■□□□ 1.15
CD4-210ENST00000541982 ARXQ96QS3 562 aa22.26■■□□□ 1.15
CD4-210ENST00000541982 KTN1Q86UP2 1357 aaKnown RBP22.25■■□□□ 1.15
CD4-210ENST00000541982 MAP3K5Q99683 1374 aa22.24■■□□□ 1.15
CD4-210ENST00000541982 ACSBG1Q96GR2 724 aa22.23■■□□□ 1.15
CD4-210ENST00000541982 IL2RBP14784 551 aa22.22■■□□□ 1.15
CD4-210ENST00000541982 L3MBTL2Q969R5 705 aa22.22■■□□□ 1.15
CD4-210ENST00000541982 NLRP2Q9NX02 1062 aa22.22■■□□□ 1.15
CD4-210ENST00000541982 ERBB3P21860 1342 aa22.21■■□□□ 1.15
CD4-210ENST00000541982 PAPPAQ13219 1627 aa22.2■■□□□ 1.15
CD4-210ENST00000541982 BTAF1O14981 1849 aa22.2■■□□□ 1.14
CD4-210ENST00000541982 ROCK2O75116 1388 aaKnown RBP22.2■■□□□ 1.14
CD4-210ENST00000541982 MON2Q7Z3U7 1717 aa22.2■■□□□ 1.14
CD4-210ENST00000541982 SENP3-EIF4A1A0A087X0R7 540 aa22.19■■□□□ 1.14
CD4-210ENST00000541982 USP31Q70CQ4 1352 aa22.19■■□□□ 1.14
CD4-210ENST00000541982 C1QTNF8P60827 252 aa22.18■■□□□ 1.14
CD4-210ENST00000541982 SLC16A10Q8TF71 515 aa22.18■■□□□ 1.14
CD4-210ENST00000541982 GPR162Q16538 588 aa22.17■■□□□ 1.14
CD4-210ENST00000541982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.17■■□□□ 1.14
CD4-210ENST00000541982 LTN1O94822 1766 aa22.17■■□□□ 1.14
CD4-210ENST00000541982 USP54Q70EL1 1684 aa22.17■■□□□ 1.14
CD4-210ENST00000541982 POLD1P28340 1107 aa22.15■■□□□ 1.14
CD4-210ENST00000541982 SLC27A3Q5K4L6 730 aa22.15■■□□□ 1.14
CD4-210ENST00000541982 ZNF827Q17R98 1081 aa22.14■■□□□ 1.13
CD4-210ENST00000541982 ANKRD24Q8TF21 1146 aa22.14■■□□□ 1.13
CD4-210ENST00000541982 QSER1Q2KHR3 1735 aa22.14■■□□□ 1.13
CD4-210ENST00000541982 LRRC4BQ9NT99 713 aa22.13■■□□□ 1.13
CD4-210ENST00000541982 HDGFL2Q7Z4V5 671 aaPredicted RBP22.12■■□□□ 1.13
CD4-210ENST00000541982 NME9Q86XW9 330 aa22.12■■□□□ 1.13
CD4-210ENST00000541982 SBNO2Q9Y2G9 1366 aa22.12■■□□□ 1.13
CD4-210ENST00000541982 AKT1S1Q96B36 256 aa22.11■■□□□ 1.13
CD4-210ENST00000541982 SIN3AQ96ST3 1273 aa22.1■■□□□ 1.13
CD4-210ENST00000541982 KLHL34Q8N239 644 aa22.09■■□□□ 1.13
CD4-210ENST00000541982 GIGYF1O75420 1035 aaPredicted RBP22.08■■□□□ 1.13
CD4-210ENST00000541982 TMC1Q8TDI8 760 aa22.08■■□□□ 1.13
CD4-210ENST00000541982 TFCP2L1Q9NZI6 479 aa22.08■■□□□ 1.13
CD4-210ENST00000541982 COL24A1Q17RW2 1714 aa22.08■■□□□ 1.12
CD4-210ENST00000541982 EDC4Q6P2E9 1401 aaKnown RBP22.07■■□□□ 1.12
CD4-210ENST00000541982 DDX54Q8TDD1 881 aaKnown RBP22.07■■□□□ 1.12
CD4-210ENST00000541982 FAM208AQ9UK61 1670 aaKnown RBP22.07■■□□□ 1.12
CD4-210ENST00000541982 PELP1Q8IZL8 1130 aaKnown RBP22.06■■□□□ 1.12
CD4-210ENST00000541982 TERF2IPQ9NYB0 399 aa22.06■■□□□ 1.12
CD4-210ENST00000541982 CD163L1Q9NR16 1453 aa22.06■■□□□ 1.12
CD4-210ENST00000541982 PNPLA7Q6ZV29 1317 aa22.06■■□□□ 1.12
CD4-210ENST00000541982 GOLGB1Q14789 3259 aaKnown RBP22.05■■□□□ 1.12
CD4-210ENST00000541982 IP6K1Q92551 441 aa22.05■■□□□ 1.12
CD4-210ENST00000541982 NEUROD1Q13562 356 aa22.04■■□□□ 1.12
CD4-210ENST00000541982 SYTL4Q96C24 671 aaPredicted RBP22.03■■□□□ 1.12
CD4-210ENST00000541982 ANKRD36BQ8N2N9 1353 aa22.02■■□□□ 1.12
CD4-210ENST00000541982 TUBGCP6Q96RT7 1819 aa22.02■■□□□ 1.12
CD4-210ENST00000541982 SLC12A5Q9H2X9 1139 aa22.02■■□□□ 1.12
CD4-210ENST00000541982 GRIN3BO60391 1043 aa22.01■■□□□ 1.11
CD4-210ENST00000541982 PRIM1P49642 420 aaKnown RBP22.01■■□□□ 1.11
CD4-210ENST00000541982 LY75O60449 1722 aa22■■□□□ 1.11
CD4-210ENST00000541982 LTV1Q96GA3 475 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms