RNA–Protein interactions for RNA: ENST00000541973.5

RAB6A-209, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB6A, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-209ENST00000541973 DISP3Q9P2K9 1392 aa13.03□□□□□ -0.32
RAB6A-209ENST00000541973 ROBO1Q9Y6N7 1651 aa13.02□□□□□ -0.32
RAB6A-209ENST00000541973 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.33
RAB6A-209ENST00000541973 NPHP3Q7Z494 1330 aa13.02□□□□□ -0.33
RAB6A-209ENST00000541973 PPIP5K1Q6PFW1 1433 aa13.02□□□□□ -0.33
RAB6A-209ENST00000541973 PSME1Q06323 249 aa13.01□□□□□ -0.33
RAB6A-209ENST00000541973 FAM163AQ96GL9 167 aaPredicted RBP13.01□□□□□ -0.33
RAB6A-209ENST00000541973 TERF2IPQ9NYB0 399 aa13.01□□□□□ -0.33
RAB6A-209ENST00000541973 CABP1Q9NZU7 370 aa13.01□□□□□ -0.33
RAB6A-209ENST00000541973 TOPAZ1Q8N9V7 1692 aa13.01□□□□□ -0.33
RAB6A-209ENST00000541973 BRD4O60885 1362 aaPredicted RBP13□□□□□ -0.33
RAB6A-209ENST00000541973 PMFBP1Q8TBY8 1022 aa13□□□□□ -0.33
RAB6A-209ENST00000541973 TMC1Q8TDI8 760 aa13□□□□□ -0.33
RAB6A-209ENST00000541973 POLR3AO14802 1390 aaPredicted RBP12.99□□□□□ -0.33
RAB6A-209ENST00000541973 FOXO3O43524 673 aa12.99□□□□□ -0.33
RAB6A-209ENST00000541973 HDGFL2Q7Z4V5 671 aaPredicted RBP12.99□□□□□ -0.33
RAB6A-209ENST00000541973 ACEP12821 1306 aa12.98□□□□□ -0.33
RAB6A-209ENST00000541973 STK25O00506 426 aa12.98□□□□□ -0.33
RAB6A-209ENST00000541973 NHSL1Q5SYE7 1610 aa12.98□□□□□ -0.33
RAB6A-209ENST00000541973 AHDC1Q5TGY3 1603 aaPredicted RBP12.98□□□□□ -0.33
RAB6A-209ENST00000541973 KIF7Q2M1P5 1343 aa12.97□□□□□ -0.33
RAB6A-209ENST00000541973 KRT28Q7Z3Y7 464 aa12.97□□□□□ -0.33
RAB6A-209ENST00000541973 LRRC59Q96AG4 307 aaKnown RBP12.97□□□□□ -0.33
RAB6A-209ENST00000541973 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
RAB6A-209ENST00000541973 SLC12A5Q9H2X9 1139 aa12.97□□□□□ -0.33
RAB6A-209ENST00000541973 SOS2Q07890 1332 aaPredicted RBP12.96□□□□□ -0.33
RAB6A-209ENST00000541973 C11orf95C9JLR9 678 aaPredicted RBP12.96□□□□□ -0.33
RAB6A-209ENST00000541973 PSEN1P49768 467 aa12.96□□□□□ -0.33
RAB6A-209ENST00000541973 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.34
RAB6A-209ENST00000541973 CCDC7Q96M83 1385 aa12.95□□□□□ -0.34
RAB6A-209ENST00000541973 GTPBP6O43824 516 aaPredicted RBP12.95□□□□□ -0.34
RAB6A-209ENST00000541973 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
RAB6A-209ENST00000541973 PHLPP1O60346 1717 aa12.95□□□□□ -0.34
RAB6A-209ENST00000541973 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
RAB6A-209ENST00000541973 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
RAB6A-209ENST00000541973 ANKRD36BQ8N2N9 1353 aa12.94□□□□□ -0.34
RAB6A-209ENST00000541973 AKAP12Q02952 1782 aa12.94□□□□□ -0.34
RAB6A-209ENST00000541973 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
RAB6A-209ENST00000541973 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.94□□□□□ -0.34
RAB6A-209ENST00000541973 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
RAB6A-209ENST00000541973 ZFP91Q96JP5 570 aaPredicted RBP12.94□□□□□ -0.34
RAB6A-209ENST00000541973 PXDNQ92626 1479 aa12.93□□□□□ -0.34
RAB6A-209ENST00000541973 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
RAB6A-209ENST00000541973 USP6P35125 1406 aa12.93□□□□□ -0.34
RAB6A-209ENST00000541973 TTC21AQ8NDW8 1320 aa12.92□□□□□ -0.34
RAB6A-209ENST00000541973 HSPA1LP34931 641 aa12.92□□□□□ -0.34
RAB6A-209ENST00000541973 MYOM1P52179 1685 aa12.92□□□□□ -0.34
RAB6A-209ENST00000541973 A0A1W2PP64 1363 aa12.92□□□□□ -0.34
RAB6A-209ENST00000541973 ARHGEF10O15013 1369 aa12.92□□□□□ -0.34
RAB6A-209ENST00000541973 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
RAB6A-209ENST00000541973 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
RAB6A-209ENST00000541973 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
RAB6A-209ENST00000541973 EDC4Q6P2E9 1401 aaKnown RBP12.91□□□□□ -0.34
RAB6A-209ENST00000541973 PDAP1Q13442 181 aaKnown RBP12.91□□□□□ -0.34
RAB6A-209ENST00000541973 DDX17Q92841 729 aaKnown RBP12.91□□□□□ -0.34
RAB6A-209ENST00000541973 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
RAB6A-209ENST00000541973 COL16A1Q07092 1604 aaPredicted RBP12.91□□□□□ -0.34
RAB6A-209ENST00000541973 XPCQ01831 940 aaPredicted RBP12.9□□□□□ -0.34
RAB6A-209ENST00000541973 PANK3Q9H999 370 aa12.9□□□□□ -0.34
RAB6A-209ENST00000541973 JCADQ9P266 1359 aa12.9□□□□□ -0.34
RAB6A-209ENST00000541973 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
RAB6A-209ENST00000541973 TTC21BQ7Z4L5 1316 aa12.89□□□□□ -0.35
RAB6A-209ENST00000541973 TNS3Q68CZ2 1445 aa12.89□□□□□ -0.35
RAB6A-209ENST00000541973 SSH2Q76I76 1423 aa12.89□□□□□ -0.35
RAB6A-209ENST00000541973 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
RAB6A-209ENST00000541973 ILDR1Q86SU0 546 aaPredicted RBP12.89□□□□□ -0.35
RAB6A-209ENST00000541973 ABTB2Q8N961 1025 aa12.89□□□□□ -0.35
RAB6A-209ENST00000541973 STK24Q9Y6E0 443 aa12.89□□□□□ -0.35
RAB6A-209ENST00000541973 LMOD2Q6P5Q4 547 aa12.88□□□□□ -0.35
RAB6A-209ENST00000541973 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
RAB6A-209ENST00000541973 KNSTRNQ9Y448 316 aa12.88□□□□□ -0.35
RAB6A-209ENST00000541973 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
RAB6A-209ENST00000541973 ALS2Q96Q42 1657 aa12.86□□□□□ -0.35
RAB6A-209ENST00000541973 NRKQ7Z2Y5 1582 aa12.86□□□□□ -0.35
RAB6A-209ENST00000541973 GOLGA2Q08379 1002 aa12.86□□□□□ -0.35
RAB6A-209ENST00000541973 CARD14Q9BXL6 1004 aa12.86□□□□□ -0.35
RAB6A-209ENST00000541973 SHPRHQ149N8 1683 aa12.86□□□□□ -0.35
RAB6A-209ENST00000541973 SPATA31A6Q5VVP1 1343 aa12.86□□□□□ -0.35
RAB6A-209ENST00000541973 PNPLA6Q8IY17 1366 aa12.85□□□□□ -0.35
RAB6A-209ENST00000541973 NLRP6P59044 892 aa12.85□□□□□ -0.35
RAB6A-209ENST00000541973 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.85□□□□□ -0.353e-8■■■■■ 27.1
RAB6A-209ENST00000541973 NSD3Q9BZ95 1437 aa12.85□□□□□ -0.35
RAB6A-209ENST00000541973 COL22A1Q8NFW1 1626 aaPredicted RBP12.84□□□□□ -0.35
RAB6A-209ENST00000541973 NSD2O96028 1365 aa12.84□□□□□ -0.35
RAB6A-209ENST00000541973 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
RAB6A-209ENST00000541973 PRKCSHP14314 528 aaPredicted RBP12.84□□□□□ -0.35
RAB6A-209ENST00000541973 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.84□□□□□ -0.35
RAB6A-209ENST00000541973 FYB1O15117 783 aa12.83□□□□□ -0.36
RAB6A-209ENST00000541973 PER1O15534 1290 aaPredicted RBP12.83□□□□□ -0.36
RAB6A-209ENST00000541973 ST18O60284 1047 aa12.83□□□□□ -0.36
RAB6A-209ENST00000541973 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
RAB6A-209ENST00000541973 COG3Q96JB2 828 aa12.83□□□□□ -0.36
RAB6A-209ENST00000541973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.365e-7■□□□□ 10.6
RAB6A-209ENST00000541973 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
RAB6A-209ENST00000541973 DDX10Q13206 875 aaKnown RBP12.82□□□□□ -0.36
RAB6A-209ENST00000541973 NME9Q86XW9 330 aa12.82□□□□□ -0.36
RAB6A-209ENST00000541973 KIF20BQ96Q89 1820 aa12.82□□□□□ -0.36
RAB6A-209ENST00000541973 PIK3C2AO00443 1686 aa12.82□□□□□ -0.36
RAB6A-209ENST00000541973 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
RAB6A-209ENST00000541973 USP54Q70EL1 1684 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms