RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 PARP4Q9UKK3 1724 aaKnown RBP21.21■□□□□ 0.99
ITM2C-208ENST00000541852 PLSCR1O15162 318 aa21.2■□□□□ 0.98
ITM2C-208ENST00000541852 PUS7Q96PZ0 661 aaKnown RBP21.2■□□□□ 0.98
ITM2C-208ENST00000541852 OVOS2A0A0G2JMS6 1433 aa21.2■□□□□ 0.98
ITM2C-208ENST00000541852 OVOS2A0A0J9YW53 1432 aa21.2■□□□□ 0.98
ITM2C-208ENST00000541852 OVOS2Q6IE36 1432 aa21.2■□□□□ 0.98
ITM2C-208ENST00000541852 CSB-PGBD3P0DP91 1061 aa21.19■□□□□ 0.98
ITM2C-208ENST00000541852 BCL11BQ9C0K0 894 aaPredicted RBP21.18■□□□□ 0.98
ITM2C-208ENST00000541852 PIK3C2AO00443 1686 aa21.18■□□□□ 0.98
ITM2C-208ENST00000541852 EXOC5O00471 708 aa21.17■□□□□ 0.98
ITM2C-208ENST00000541852 HDGFL2Q7Z4V5 671 aaPredicted RBP21.17■□□□□ 0.98
ITM2C-208ENST00000541852 COL18A1P39060 1754 aa21.16■□□□□ 0.98
ITM2C-208ENST00000541852 AKAP12Q02952 1782 aa21.16■□□□□ 0.98
ITM2C-208ENST00000541852 BCL9O00512 1426 aa21.14■□□□□ 0.98
ITM2C-208ENST00000541852 USP31Q70CQ4 1352 aa21.14■□□□□ 0.98
ITM2C-208ENST00000541852 TONSLQ96HA7 1378 aa21.14■□□□□ 0.98
ITM2C-208ENST00000541852 CCDC7Q96M83 1385 aa21.14■□□□□ 0.98
ITM2C-208ENST00000541852 SOX12O15370 315 aa21.14■□□□□ 0.97
ITM2C-208ENST00000541852 TMC1Q8TDI8 760 aa21.14■□□□□ 0.97
ITM2C-208ENST00000541852 TERF2IPQ9NYB0 399 aa21.14■□□□□ 0.97
ITM2C-208ENST00000541852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.12■□□□□ 0.97
ITM2C-208ENST00000541852 ABCC6O95255 1503 aa21.12■□□□□ 0.97
ITM2C-208ENST00000541852 MARCH10Q8NA82 808 aaPredicted RBP21.11■□□□□ 0.97
ITM2C-208ENST00000541852 RREB1Q92766 1687 aa21.11■□□□□ 0.97
ITM2C-208ENST00000541852 SPON1Q9HCB6 807 aa21.1■□□□□ 0.97
ITM2C-208ENST00000541852 SLC12A5Q9H2X9 1139 aa21.09■□□□□ 0.97
ITM2C-208ENST00000541852 PEAK1Q9H792 1746 aa21.09■□□□□ 0.97
ITM2C-208ENST00000541852 NFAT5O94916 1531 aa21.08■□□□□ 0.96
ITM2C-208ENST00000541852 SBF2Q86WG5 1849 aa21.07■□□□□ 0.96
ITM2C-208ENST00000541852 KCNQ2O43526 872 aa21.07■□□□□ 0.96
ITM2C-208ENST00000541852 LRRC37A3O60309 1634 aa21.07■□□□□ 0.96
ITM2C-208ENST00000541852 NUP188Q5SRE5 1749 aa21.07■□□□□ 0.96
ITM2C-208ENST00000541852 EDC4Q6P2E9 1401 aaKnown RBP21.06■□□□□ 0.96
ITM2C-208ENST00000541852 RGPD5Q99666 1765 aa21.06■□□□□ 0.96
ITM2C-208ENST00000541852 NME9Q86XW9 330 aa21.06■□□□□ 0.96
ITM2C-208ENST00000541852 MON2Q7Z3U7 1717 aa21.06■□□□□ 0.96
ITM2C-208ENST00000541852 RGPD3A6NKT7 1758 aaPredicted RBP21.05■□□□□ 0.96
ITM2C-208ENST00000541852 RGPD4Q7Z3J3 1758 aa21.05■□□□□ 0.96
ITM2C-208ENST00000541852 NLRP2Q9NX02 1062 aa21.05■□□□□ 0.96
ITM2C-208ENST00000541852 NINLQ9Y2I6 1382 aa21.05■□□□□ 0.96
ITM2C-208ENST00000541852 ERBB3P21860 1342 aa21.04■□□□□ 0.96
ITM2C-208ENST00000541852 PPP1R1BQ9UD71 204 aaPredicted RBP21.04■□□□□ 0.96
ITM2C-208ENST00000541852 CD163L1Q9NR16 1453 aa21.03■□□□□ 0.96
ITM2C-208ENST00000541852 DCAF8L1A6NGE4 600 aa21.03■□□□□ 0.96
ITM2C-208ENST00000541852 IL2RBP14784 551 aa21.03■□□□□ 0.96
ITM2C-208ENST00000541852 USP54Q70EL1 1684 aa21.02■□□□□ 0.95
ITM2C-208ENST00000541852 WNK3Q9BYP7 1800 aa21.01■□□□□ 0.95
ITM2C-208ENST00000541852 PROM2Q8N271 834 aa21.01■□□□□ 0.95
ITM2C-208ENST00000541852 ANKRD24Q8TF21 1146 aa21.01■□□□□ 0.95
ITM2C-208ENST00000541852 ST20-MTHFSA0A0A6YYL1 179 aa21■□□□□ 0.95
ITM2C-208ENST00000541852 IP6K1Q92551 441 aa21■□□□□ 0.95
ITM2C-208ENST00000541852 TNS2Q63HR2 1409 aa20.99■□□□□ 0.95
ITM2C-208ENST00000541852 TXNRD1Q16881 649 aa20.99■□□□□ 0.95
ITM2C-208ENST00000541852 PTF1AQ7RTS3 328 aa20.99■□□□□ 0.95
ITM2C-208ENST00000541852 TESK2Q96S53 571 aa20.99■□□□□ 0.95
ITM2C-208ENST00000541852 STK32BQ9NY57 414 aa20.99■□□□□ 0.95
ITM2C-208ENST00000541852 A0A1W2PP64 1363 aa20.98■□□□□ 0.95
ITM2C-208ENST00000541852 COG3Q96JB2 828 aa20.98■□□□□ 0.95
ITM2C-208ENST00000541852 TRIM26Q12899 539 aaPredicted RBP20.96■□□□□ 0.95
ITM2C-208ENST00000541852 SLC15A2Q16348 729 aa20.95■□□□□ 0.94
ITM2C-208ENST00000541852 ANO8Q9HCE9 1232 aaPredicted RBP20.95■□□□□ 0.94
ITM2C-208ENST00000541852 CDCA8Q53HL2 280 aa20.94■□□□□ 0.94
ITM2C-208ENST00000541852 LTN1O94822 1766 aa20.94■□□□□ 0.94
ITM2C-208ENST00000541852 TMF1P82094 1093 aa20.93■□□□□ 0.94
ITM2C-208ENST00000541852 AMPHP49418 695 aa20.92■□□□□ 0.94
ITM2C-208ENST00000541852 KAT6BQ8WYB5 2073 aa20.92■□□□□ 0.94
ITM2C-208ENST00000541852 ACSBG1Q96GR2 724 aa20.91■□□□□ 0.94
ITM2C-208ENST00000541852 ANKRD36BQ8N2N9 1353 aa20.9■□□□□ 0.94
ITM2C-208ENST00000541852 ZBTB7AO95365 584 aa20.88■□□□□ 0.93
ITM2C-208ENST00000541852 HOXC9P31274 260 aa20.88■□□□□ 0.93
ITM2C-208ENST00000541852 DDX54Q8TDD1 881 aaKnown RBP20.88■□□□□ 0.93
ITM2C-208ENST00000541852 LTV1Q96GA3 475 aaPredicted RBP20.88■□□□□ 0.93
ITM2C-208ENST00000541852 MTFR1LQ9H019 292 aa20.88■□□□□ 0.93
ITM2C-208ENST00000541852 TIMELESSQ9UNS1 1208 aa20.88■□□□□ 0.93
ITM2C-208ENST00000541852 NHSQ6T4R5 1651 aa20.87■□□□□ 0.93
ITM2C-208ENST00000541852 MAP3K19Q56UN5 1328 aa20.87■□□□□ 0.93
ITM2C-208ENST00000541852 YY1P25490 414 aa20.87■□□□□ 0.93
ITM2C-208ENST00000541852 SLC27A3Q5K4L6 730 aa20.87■□□□□ 0.93
ITM2C-208ENST00000541852 FAM208AQ9UK61 1670 aaKnown RBP20.86■□□□□ 0.93
ITM2C-208ENST00000541852 CASZ1Q86V15 1759 aa20.85■□□□□ 0.93
ITM2C-208ENST00000541852 CGNL1Q0VF96 1302 aa20.85■□□□□ 0.93
ITM2C-208ENST00000541852 FYB1O15117 783 aa20.85■□□□□ 0.93
ITM2C-208ENST00000541852 HMGB2P26583 209 aaKnown RBP20.85■□□□□ 0.93
ITM2C-208ENST00000541852 PTGER2P43116 358 aa20.85■□□□□ 0.93
ITM2C-208ENST00000541852 ZCRB1Q8TBF4 217 aaKnown RBP20.85■□□□□ 0.93
ITM2C-208ENST00000541852 PDGFDQ9GZP0 370 aaPredicted RBP20.85■□□□□ 0.93
ITM2C-208ENST00000541852 ATF5Q9Y2D1 282 aaPredicted RBP20.85■□□□□ 0.93
ITM2C-208ENST00000541852 RTL1A6NKG5 1358 aa20.83■□□□□ 0.92
ITM2C-208ENST00000541852 USP47Q96K76 1375 aa20.83■□□□□ 0.92
ITM2C-208ENST00000541852 SLC16A10Q8TF71 515 aa20.82■□□□□ 0.92
ITM2C-208ENST00000541852 PRIM1P49642 420 aaKnown RBP20.8■□□□□ 0.92
ITM2C-208ENST00000541852 GGNBP2Q9H3C7 697 aa20.8■□□□□ 0.92
ITM2C-208ENST00000541852 KIF24Q5T7B8 1368 aa20.8■□□□□ 0.92
ITM2C-208ENST00000541852 SMG6Q86US8 1419 aaKnown RBP20.79■□□□□ 0.92
ITM2C-208ENST00000541852 BTAF1O14981 1849 aa20.79■□□□□ 0.92
ITM2C-208ENST00000541852 FBLN1P23142 703 aa20.79■□□□□ 0.92
ITM2C-208ENST00000541852 RAPGEF4Q8WZA2 1011 aa20.79■□□□□ 0.92
ITM2C-208ENST00000541852 SYTL4Q96C24 671 aaPredicted RBP20.79■□□□□ 0.92
ITM2C-208ENST00000541852 SYT17Q9BSW7 474 aa20.79■□□□□ 0.92
ITM2C-208ENST00000541852 LRRC4BQ9NT99 713 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms