RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-229ENST00000540643 RAI14Q9P0K7 980 aa15.39■□□□□ 0.05
SFI1-229ENST00000540643 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
SFI1-229ENST00000540643 GOLGA6L10A6NI86 522 aa15.39■□□□□ 0.05
SFI1-229ENST00000540643 PDZRN3Q9UPQ7 1066 aa15.39■□□□□ 0.05
SFI1-229ENST00000540643 ATP6V1DQ9Y5K8 247 aa15.39■□□□□ 0.05
SFI1-229ENST00000540643 C20orf194Q5TEA3 1177 aa15.38■□□□□ 0.05
SFI1-229ENST00000540643 WDR63Q8IWG1 891 aa15.38■□□□□ 0.05
SFI1-229ENST00000540643 MLECQ14165 292 aa15.38■□□□□ 0.05
SFI1-229ENST00000540643 C8orf34Q49A92 452 aa15.38■□□□□ 0.05
SFI1-229ENST00000540643 RNF187Q5TA31 235 aaPredicted RBP15.38■□□□□ 0.05
SFI1-229ENST00000540643 PANK1Q8TE04 598 aa15.38■□□□□ 0.05
SFI1-229ENST00000540643 TIAM1Q13009 1591 aa15.38■□□□□ 0.05
SFI1-229ENST00000540643 SHTN1A0MZ66 631 aa15.38■□□□□ 0.05
SFI1-229ENST00000540643 KCNG1Q9UIX4 513 aa15.38■□□□□ 0.05
SFI1-229ENST00000540643 CCDC146Q8IYE0 955 aa15.37■□□□□ 0.05
SFI1-229ENST00000540643 PAXBP1Q9Y5B6 917 aa15.37■□□□□ 0.05
SFI1-229ENST00000540643 BAG4O95429 457 aaKnown RBP15.37■□□□□ 0.05
SFI1-229ENST00000540643 ANKRD45Q5TZF3 282 aa15.37■□□□□ 0.05
SFI1-229ENST00000540643 DHX16O60231 1041 aaKnown RBP15.37■□□□□ 0.05
SFI1-229ENST00000540643 RAD51AP2Q09MP3 1159 aa15.37■□□□□ 0.05
SFI1-229ENST00000540643 RBBP5Q15291 538 aaKnown RBP15.37■□□□□ 0.05
SFI1-229ENST00000540643 PRPF38AQ8NAV1 312 aaKnown RBP15.37■□□□□ 0.05
SFI1-229ENST00000540643 RBSNQ9H1K0 784 aa15.37■□□□□ 0.05
SFI1-229ENST00000540643 PRDM2Q13029 1718 aa15.37■□□□□ 0.05
SFI1-229ENST00000540643 TERF2Q15554 542 aa15.36■□□□□ 0.05
SFI1-229ENST00000540643 CEP135Q66GS9 1140 aa15.36■□□□□ 0.05
SFI1-229ENST00000540643 ANKRD18AQ8IVF6 992 aa15.36■□□□□ 0.05
SFI1-229ENST00000540643 LNPKQ9C0E8 428 aa15.36■□□□□ 0.05
SFI1-229ENST00000540643 CXorf56Q9H5V9 222 aa15.36■□□□□ 0.05
SFI1-229ENST00000540643 ERLIN1O75477 346 aa15.36■□□□□ 0.05
SFI1-229ENST00000540643 URI1O94763 535 aaPredicted RBP15.36■□□□□ 0.05
SFI1-229ENST00000540643 SMC2O95347 1197 aa15.36■□□□□ 0.05
SFI1-229ENST00000540643 MYO1CO00159 1063 aa15.35■□□□□ 0.05
SFI1-229ENST00000540643 FIBPO43427 364 aa15.35■□□□□ 0.05
SFI1-229ENST00000540643 KIF4AO95239 1232 aa15.35■□□□□ 0.05
SFI1-229ENST00000540643 SYT10Q6XYQ8 523 aa15.35■□□□□ 0.05
SFI1-229ENST00000540643 SPATS2LQ9NUQ6 558 aaKnown RBP15.35■□□□□ 0.05
SFI1-229ENST00000540643 RNF216Q9NWF9 866 aaPredicted RBP15.35■□□□□ 0.05
SFI1-229ENST00000540643 PCF11O94913 1555 aaKnown RBP15.35■□□□□ 0.05
SFI1-229ENST00000540643 EZRP15311 586 aaKnown RBP15.35■□□□□ 0.05
SFI1-229ENST00000540643 RPUSD2Q8IZ73 545 aaKnown RBP15.35■□□□□ 0.05
SFI1-229ENST00000540643 PPP1R9BQ96SB3 815 aa15.35■□□□□ 0.05
SFI1-229ENST00000540643 CREBRFQ8IUR6 639 aa15.35■□□□□ 0.05
SFI1-229ENST00000540643 KIF21AQ7Z4S6 1674 aa15.34■□□□□ 0.05
SFI1-229ENST00000540643 BICD2Q8TD16 824 aa15.34■□□□□ 0.05
SFI1-229ENST00000540643 MRFAP1L1Q96HT8 127 aa15.34■□□□□ 0.05
SFI1-229ENST00000540643 YY1AP1Q9H869 796 aa15.34■□□□□ 0.05
SFI1-229ENST00000540643 MCM6Q14566 821 aa15.33■□□□□ 0.05
SFI1-229ENST00000540643 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.05
SFI1-229ENST00000540643 GOPCQ9HD26 462 aa15.33■□□□□ 0.04
SFI1-229ENST00000540643 FYCO1Q9BQS8 1478 aa15.33■□□□□ 0.04
SFI1-229ENST00000540643 RGL3Q3MIN7 710 aa15.33■□□□□ 0.04
SFI1-229ENST00000540643 LRSAM1Q6UWE0 723 aa15.33■□□□□ 0.04
SFI1-229ENST00000540643 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.33■□□□□ 0.04
SFI1-229ENST00000540643 MRFAP1Q9Y605 127 aa15.33■□□□□ 0.04
SFI1-229ENST00000540643 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
SFI1-229ENST00000540643 FRMD3A2A2Y4 597 aa15.32■□□□□ 0.04
SFI1-229ENST00000540643 KIF1CO43896 1103 aaKnown RBP15.32■□□□□ 0.04
SFI1-229ENST00000540643 CCDC192P0DO97 292 aa15.32■□□□□ 0.04
SFI1-229ENST00000540643 FEZ2Q9UHY8 353 aaPredicted RBP15.32■□□□□ 0.04
SFI1-229ENST00000540643 RRP15Q9Y3B9 282 aaKnown RBP15.32■□□□□ 0.04
SFI1-229ENST00000540643 CCDC27Q2M243 656 aa15.32■□□□□ 0.04
SFI1-229ENST00000540643 ZNF644Q9H582 1327 aaPredicted RBP15.32■□□□□ 0.04
SFI1-229ENST00000540643 PHACTR2O75167 634 aa15.32■□□□□ 0.04
SFI1-229ENST00000540643 HCLS1P14317 486 aaPredicted RBP15.32■□□□□ 0.04
SFI1-229ENST00000540643 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
SFI1-229ENST00000540643 SNAPC4Q5SXM2 1469 aa15.31■□□□□ 0.04
SFI1-229ENST00000540643 FGD6Q6ZV73 1430 aa15.31■□□□□ 0.04
SFI1-229ENST00000540643 DCTN1Q14203 1278 aa15.31■□□□□ 0.04
SFI1-229ENST00000540643 LRRCC1Q9C099 1032 aa15.31■□□□□ 0.04
SFI1-229ENST00000540643 SMTNL1A8MU46 457 aa15.31■□□□□ 0.04
SFI1-229ENST00000540643 VGFO15240 615 aaPredicted RBP15.31■□□□□ 0.04
SFI1-229ENST00000540643 VPS18Q9P253 973 aa15.31■□□□□ 0.04
SFI1-229ENST00000540643 STK26Q9P289 416 aa15.31■□□□□ 0.04
SFI1-229ENST00000540643 EFCAB5A4FU69 1503 aa15.3■□□□□ 0.04
SFI1-229ENST00000540643 CUL7Q14999 1698 aa15.3■□□□□ 0.04
SFI1-229ENST00000540643 SMARCC1Q92922 1105 aaPredicted RBP15.3■□□□□ 0.04
SFI1-229ENST00000540643 TBC1D32Q96NH3 1257 aa15.3■□□□□ 0.04
SFI1-229ENST00000540643 MYBBP1AQ9BQG0 1328 aaKnown RBP15.3■□□□□ 0.04
SFI1-229ENST00000540643 VPS37CA5D8V6 355 aaPredicted RBP15.3■□□□□ 0.04
SFI1-229ENST00000540643 ARHGAP29Q52LW3 1261 aa15.3■□□□□ 0.04
SFI1-229ENST00000540643 CEP120Q8N960 986 aa15.3■□□□□ 0.04
SFI1-229ENST00000540643 VEZTQ9HBM0 779 aa15.29■□□□□ 0.04
SFI1-229ENST00000540643 SLU7O95391 586 aaKnown RBP15.29■□□□□ 0.04
SFI1-229ENST00000540643 GYS2P54840 703 aa15.29■□□□□ 0.04
SFI1-229ENST00000540643 PRR29P0C7W0 189 aa15.29■□□□□ 0.04
SFI1-229ENST00000540643 ELF2Q15723 593 aa15.29■□□□□ 0.04
SFI1-229ENST00000540643 NBPF8Q3BBV2 869 aa15.29■□□□□ 0.04
SFI1-229ENST00000540643 FMNL2Q96PY5 1086 aa15.29■□□□□ 0.04
SFI1-229ENST00000540643 ARFGAP3Q9NP61 516 aa15.29■□□□□ 0.04
SFI1-229ENST00000540643 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.29■□□□□ 0.04
SFI1-229ENST00000540643 SEC24BO95487 1268 aa15.28■□□□□ 0.04
SFI1-229ENST00000540643 PSMD2Q13200 908 aa15.28■□□□□ 0.04
SFI1-229ENST00000540643 SCLT1Q96NL6 688 aa15.28■□□□□ 0.04
SFI1-229ENST00000540643 EBAG9O00559 213 aa15.28■□□□□ 0.04
SFI1-229ENST00000540643 IPO7O95373 1038 aaKnown RBP15.28■□□□□ 0.04
SFI1-229ENST00000540643 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
SFI1-229ENST00000540643 DBN1Q16643 649 aa15.28■□□□□ 0.04
SFI1-229ENST00000540643 NAT10Q9H0A0 1025 aaKnown RBP15.28■□□□□ 0.04
SFI1-229ENST00000540643 NCOA2Q15596 1464 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms