RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 USP31Q70CQ4 1352 aa23.65■■□□□ 1.38
PSMD3-204ENST00000540504 NFAT5O94916 1531 aa23.65■■□□□ 1.38
PSMD3-204ENST00000540504 ABCC6O95255 1503 aa23.65■■□□□ 1.38
PSMD3-204ENST00000540504 USP54Q70EL1 1684 aa23.65■■□□□ 1.38
PSMD3-204ENST00000540504 SLC24A1O60721 1099 aa23.65■■□□□ 1.38
PSMD3-204ENST00000540504 EZH2Q15910 746 aaKnown RBP23.65■■□□□ 1.38
PSMD3-204ENST00000540504 HDGFL2Q7Z4V5 671 aaPredicted RBP23.65■■□□□ 1.38
PSMD3-204ENST00000540504 CD163L1Q9NR16 1453 aa23.64■■□□□ 1.38
PSMD3-204ENST00000540504 TMC1Q8TDI8 760 aa23.64■■□□□ 1.37
PSMD3-204ENST00000540504 CDCA7Q9BWT1 371 aaPredicted RBP23.64■■□□□ 1.37
PSMD3-204ENST00000540504 RGPD5Q99666 1765 aa23.63■■□□□ 1.37
PSMD3-204ENST00000540504 PSDA5PKW4 1024 aaPredicted RBP23.63■■□□□ 1.37
PSMD3-204ENST00000540504 OVOS2A0A0G2JMS6 1433 aa23.62■■□□□ 1.37
PSMD3-204ENST00000540504 OVOS2A0A0J9YW53 1432 aa23.62■■□□□ 1.37
PSMD3-204ENST00000540504 OVOS2Q6IE36 1432 aa23.62■■□□□ 1.37
PSMD3-204ENST00000540504 WNK3Q9BYP7 1800 aa23.62■■□□□ 1.37
PSMD3-204ENST00000540504 SOX12O15370 315 aa23.62■■□□□ 1.37
PSMD3-204ENST00000540504 DDB1Q16531 1140 aa23.62■■□□□ 1.37
PSMD3-204ENST00000540504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.62■■□□□ 1.37
PSMD3-204ENST00000540504 TERF2IPQ9NYB0 399 aa23.62■■□□□ 1.37
PSMD3-204ENST00000540504 LRRC37A3O60309 1634 aa23.62■■□□□ 1.37
PSMD3-204ENST00000540504 EDC4Q6P2E9 1401 aaKnown RBP23.61■■□□□ 1.37
PSMD3-204ENST00000540504 CARD10Q9BWT7 1032 aa23.61■■□□□ 1.37
PSMD3-204ENST00000540504 SLC12A5Q9H2X9 1139 aa23.61■■□□□ 1.37
PSMD3-204ENST00000540504 PEAK1Q9H792 1746 aa23.6■■□□□ 1.37
PSMD3-204ENST00000540504 CSB-PGBD3P0DP91 1061 aa23.59■■□□□ 1.37
PSMD3-204ENST00000540504 NINLQ9Y2I6 1382 aa23.59■■□□□ 1.37
PSMD3-204ENST00000540504 RREB1Q92766 1687 aa23.59■■□□□ 1.37
PSMD3-204ENST00000540504 R3HDM1Q15032 1099 aaKnown RBP23.58■■□□□ 1.37
PSMD3-204ENST00000540504 NME9Q86XW9 330 aa23.58■■□□□ 1.37
PSMD3-204ENST00000540504 CCDC7Q96M83 1385 aa23.57■■□□□ 1.36
PSMD3-204ENST00000540504 TESK2Q96S53 571 aa23.57■■□□□ 1.36
PSMD3-204ENST00000540504 A0A1W2PP64 1363 aa23.56■■□□□ 1.36
PSMD3-204ENST00000540504 ST20-MTHFSA0A0A6YYL1 179 aa23.56■■□□□ 1.36
PSMD3-204ENST00000540504 SBF2Q86WG5 1849 aa23.56■■□□□ 1.36
PSMD3-204ENST00000540504 BCL9O00512 1426 aa23.55■■□□□ 1.36
PSMD3-204ENST00000540504 LTN1O94822 1766 aa23.54■■□□□ 1.36
PSMD3-204ENST00000540504 NUP188Q5SRE5 1749 aa23.53■■□□□ 1.36
PSMD3-204ENST00000540504 RGPD3A6NKT7 1758 aaPredicted RBP23.53■■□□□ 1.36
PSMD3-204ENST00000540504 RGPD4Q7Z3J3 1758 aa23.53■■□□□ 1.36
PSMD3-204ENST00000540504 NBPF14Q5TI25 921 aa23.53■■□□□ 1.36
PSMD3-204ENST00000540504 ERBB3P21860 1342 aa23.52■■□□□ 1.36
PSMD3-204ENST00000540504 EXOC5O00471 708 aa23.51■■□□□ 1.35
PSMD3-204ENST00000540504 PLSCR1O15162 318 aa23.51■■□□□ 1.35
PSMD3-204ENST00000540504 MARCH10Q8NA82 808 aaPredicted RBP23.51■■□□□ 1.35
PSMD3-204ENST00000540504 BCL11BQ9C0K0 894 aaPredicted RBP23.5■■□□□ 1.35
PSMD3-204ENST00000540504 TNS2Q63HR2 1409 aa23.47■■□□□ 1.35
PSMD3-204ENST00000540504 TMF1P82094 1093 aa23.46■■□□□ 1.35
PSMD3-204ENST00000540504 NLRP2Q9NX02 1062 aa23.46■■□□□ 1.35
PSMD3-204ENST00000540504 ANKRD36BQ8N2N9 1353 aa23.45■■□□□ 1.34
PSMD3-204ENST00000540504 USP47Q96K76 1375 aa23.45■■□□□ 1.34
PSMD3-204ENST00000540504 ANKRD24Q8TF21 1146 aa23.45■■□□□ 1.34
PSMD3-204ENST00000540504 TIMELESSQ9UNS1 1208 aa23.45■■□□□ 1.34
PSMD3-204ENST00000540504 COG3Q96JB2 828 aa23.44■■□□□ 1.34
PSMD3-204ENST00000540504 IL2RBP14784 551 aa23.43■■□□□ 1.34
PSMD3-204ENST00000540504 IP6K1Q92551 441 aa23.43■■□□□ 1.34
PSMD3-204ENST00000540504 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
PSMD3-204ENST00000540504 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
PSMD3-204ENST00000540504 FAM208AQ9UK61 1670 aaKnown RBP23.41■■□□□ 1.34
PSMD3-204ENST00000540504 PTF1AQ7RTS3 328 aa23.4■■□□□ 1.34
PSMD3-204ENST00000540504 NHSQ6T4R5 1651 aa23.37■■□□□ 1.33
PSMD3-204ENST00000540504 MAP3K19Q56UN5 1328 aa23.36■■□□□ 1.33
PSMD3-204ENST00000540504 PROM2Q8N271 834 aa23.35■■□□□ 1.33
PSMD3-204ENST00000540504 FYB1O15117 783 aa23.34■■□□□ 1.33
PSMD3-204ENST00000540504 HOXC9P31274 260 aa23.34■■□□□ 1.33
PSMD3-204ENST00000540504 AMPHP49418 695 aa23.34■■□□□ 1.33
PSMD3-204ENST00000540504 SPON1Q9HCB6 807 aa23.34■■□□□ 1.33
PSMD3-204ENST00000540504 RTL1A6NKG5 1358 aa23.33■■□□□ 1.33
PSMD3-204ENST00000540504 TXNRD1Q16881 649 aa23.33■■□□□ 1.33
PSMD3-204ENST00000540504 KCNQ2O43526 872 aa23.32■■□□□ 1.32
PSMD3-204ENST00000540504 LTV1Q96GA3 475 aaPredicted RBP23.32■■□□□ 1.32
PSMD3-204ENST00000540504 ANO8Q9HCE9 1232 aaPredicted RBP23.32■■□□□ 1.32
PSMD3-204ENST00000540504 GGNBP2Q9H3C7 697 aa23.3■■□□□ 1.32
PSMD3-204ENST00000540504 FBLN1P23142 703 aa23.29■■□□□ 1.32
PSMD3-204ENST00000540504 ACSBG1Q96GR2 724 aa23.29■■□□□ 1.32
PSMD3-204ENST00000540504 KIF20BQ96Q89 1820 aa23.29■■□□□ 1.32
PSMD3-204ENST00000540504 CASZ1Q86V15 1759 aa23.28■■□□□ 1.32
PSMD3-204ENST00000540504 PCGF6Q9BYE7 350 aa23.28■■□□□ 1.32
PSMD3-204ENST00000540504 STK32BQ9NY57 414 aa23.28■■□□□ 1.32
PSMD3-204ENST00000540504 BTAF1O14981 1849 aa23.27■■□□□ 1.32
PSMD3-204ENST00000540504 MYOM1P52179 1685 aa23.26■■□□□ 1.31
PSMD3-204ENST00000540504 RRS1Q15050 365 aaKnown RBP23.26■■□□□ 1.31
PSMD3-204ENST00000540504 SLC15A2Q16348 729 aa23.26■■□□□ 1.31
PSMD3-204ENST00000540504 PPP1R1BQ9UD71 204 aaPredicted RBP23.26■■□□□ 1.31
PSMD3-204ENST00000540504 KAT6BQ8WYB5 2073 aa23.26■■□□□ 1.31
PSMD3-204ENST00000540504 KIF24Q5T7B8 1368 aa23.26■■□□□ 1.31
PSMD3-204ENST00000540504 SMG6Q86US8 1419 aaKnown RBP23.25■■□□□ 1.31
PSMD3-204ENST00000540504 RGPD2P0DJD1 1756 aa23.25■■□□□ 1.31
PSMD3-204ENST00000540504 DDX54Q8TDD1 881 aaKnown RBP23.25■■□□□ 1.31
PSMD3-204ENST00000540504 CGNL1Q0VF96 1302 aa23.23■■□□□ 1.31
PSMD3-204ENST00000540504 ZCRB1Q8TBF4 217 aaKnown RBP23.22■■□□□ 1.31
PSMD3-204ENST00000540504 CARD14Q9BXL6 1004 aa23.22■■□□□ 1.31
PSMD3-204ENST00000540504 INSRP06213 1382 aa23.22■■□□□ 1.31
PSMD3-204ENST00000540504 FLT4P35916 1363 aa23.21■■□□□ 1.31
PSMD3-204ENST00000540504 NSD3Q9BZ95 1437 aa23.2■■□□□ 1.3
PSMD3-204ENST00000540504 NBPF6Q5VWK0 638 aa23.2■■□□□ 1.3
PSMD3-204ENST00000540504 NBPF4Q96M43 638 aa23.2■■□□□ 1.3
PSMD3-204ENST00000540504 SHANK3Q9BYB0 1731 aa23.19■■□□□ 1.3
PSMD3-204ENST00000540504 PAPPAQ13219 1627 aa23.19■■□□□ 1.3
PSMD3-204ENST00000540504 MEGF6O75095 1541 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms