RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 OVOS2Q6IE36 1432 aa21.62■■□□□ 1.05
UBE3B-211ENST00000539843 NBPF14Q5TI25 921 aa21.61■■□□□ 1.05
UBE3B-211ENST00000539843 R3HDM1Q15032 1099 aaKnown RBP21.6■■□□□ 1.05
UBE3B-211ENST00000539843 ARHGEF25Q86VW2 580 aa21.6■■□□□ 1.05
UBE3B-211ENST00000539843 CAMKK2Q96RR4 588 aa21.6■■□□□ 1.05
UBE3B-211ENST00000539843 TERF2IPQ9NYB0 399 aa21.6■■□□□ 1.05
UBE3B-211ENST00000539843 AKAP12Q02952 1782 aa21.6■■□□□ 1.05
UBE3B-211ENST00000539843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.59■■□□□ 1.05
UBE3B-211ENST00000539843 PARP4Q9UKK3 1724 aaKnown RBP21.59■■□□□ 1.05
UBE3B-211ENST00000539843 LRP5O75197 1615 aa21.58■■□□□ 1.05
UBE3B-211ENST00000539843 TRIM26Q12899 539 aaPredicted RBP21.58■■□□□ 1.05
UBE3B-211ENST00000539843 ABCC6O95255 1503 aa21.56■■□□□ 1.04
UBE3B-211ENST00000539843 PUS7Q96PZ0 661 aaKnown RBP21.56■■□□□ 1.04
UBE3B-211ENST00000539843 CARD10Q9BWT7 1032 aa21.56■■□□□ 1.04
UBE3B-211ENST00000539843 AXIN2Q9Y2T1 843 aa21.55■■□□□ 1.04
UBE3B-211ENST00000539843 CCDC7Q96M83 1385 aa21.55■■□□□ 1.04
UBE3B-211ENST00000539843 USP31Q70CQ4 1352 aa21.54■■□□□ 1.04
UBE3B-211ENST00000539843 NINLQ9Y2I6 1382 aa21.54■■□□□ 1.04
UBE3B-211ENST00000539843 MON2Q7Z3U7 1717 aa21.54■■□□□ 1.04
UBE3B-211ENST00000539843 EDC4Q6P2E9 1401 aaKnown RBP21.53■■□□□ 1.04
UBE3B-211ENST00000539843 LRRC37A3O60309 1634 aa21.51■■□□□ 1.03
UBE3B-211ENST00000539843 COL18A1P39060 1754 aa21.51■■□□□ 1.03
UBE3B-211ENST00000539843 NFAT5O94916 1531 aa21.51■■□□□ 1.03
UBE3B-211ENST00000539843 EXOC5O00471 708 aa21.51■■□□□ 1.03
UBE3B-211ENST00000539843 NME9Q86XW9 330 aa21.51■■□□□ 1.03
UBE3B-211ENST00000539843 SLC12A5Q9H2X9 1139 aa21.51■■□□□ 1.03
UBE3B-211ENST00000539843 SRCAPQ6ZRS2 3230 aa21.51■■□□□ 1.03
UBE3B-211ENST00000539843 BCL11BQ9C0K0 894 aaPredicted RBP21.49■■□□□ 1.03
UBE3B-211ENST00000539843 CD163L1Q9NR16 1453 aa21.48■■□□□ 1.03
UBE3B-211ENST00000539843 NLRP2Q9NX02 1062 aa21.48■■□□□ 1.03
UBE3B-211ENST00000539843 A0A1W2PP64 1363 aa21.48■■□□□ 1.03
UBE3B-211ENST00000539843 ST20-MTHFSA0A0A6YYL1 179 aa21.47■■□□□ 1.03
UBE3B-211ENST00000539843 PLSCR1O15162 318 aa21.47■■□□□ 1.03
UBE3B-211ENST00000539843 ERBB3P21860 1342 aa21.46■■□□□ 1.03
UBE3B-211ENST00000539843 RREB1Q92766 1687 aa21.46■■□□□ 1.03
UBE3B-211ENST00000539843 BCL9O00512 1426 aa21.46■■□□□ 1.03
UBE3B-211ENST00000539843 USP54Q70EL1 1684 aa21.45■■□□□ 1.02
UBE3B-211ENST00000539843 MARCH10Q8NA82 808 aaPredicted RBP21.45■■□□□ 1.02
UBE3B-211ENST00000539843 WNK3Q9BYP7 1800 aa21.45■■□□□ 1.02
UBE3B-211ENST00000539843 TMF1P82094 1093 aa21.44■■□□□ 1.02
UBE3B-211ENST00000539843 COG3Q96JB2 828 aa21.44■■□□□ 1.02
UBE3B-211ENST00000539843 TNS2Q63HR2 1409 aa21.44■■□□□ 1.02
UBE3B-211ENST00000539843 PEAK1Q9H792 1746 aa21.43■■□□□ 1.02
UBE3B-211ENST00000539843 ANKRD24Q8TF21 1146 aa21.43■■□□□ 1.02
UBE3B-211ENST00000539843 NUP188Q5SRE5 1749 aa21.43■■□□□ 1.02
UBE3B-211ENST00000539843 IL2RBP14784 551 aa21.42■■□□□ 1.02
UBE3B-211ENST00000539843 CDCA8Q53HL2 280 aa21.42■■□□□ 1.02
UBE3B-211ENST00000539843 RGPD3A6NKT7 1758 aaPredicted RBP21.41■■□□□ 1.02
UBE3B-211ENST00000539843 RGPD4Q7Z3J3 1758 aa21.41■■□□□ 1.02
UBE3B-211ENST00000539843 TESK2Q96S53 571 aa21.41■■□□□ 1.02
UBE3B-211ENST00000539843 PPP1R1BQ9UD71 204 aaPredicted RBP21.41■■□□□ 1.02
UBE3B-211ENST00000539843 RGPD5Q99666 1765 aa21.41■■□□□ 1.02
UBE3B-211ENST00000539843 SPON1Q9HCB6 807 aa21.4■■□□□ 1.02
UBE3B-211ENST00000539843 USP47Q96K76 1375 aa21.39■■□□□ 1.02
UBE3B-211ENST00000539843 ANKRD36BQ8N2N9 1353 aa21.38■■□□□ 1.01
UBE3B-211ENST00000539843 IP6K1Q92551 441 aa21.38■■□□□ 1.01
UBE3B-211ENST00000539843 LTN1O94822 1766 aa21.38■■□□□ 1.01
UBE3B-211ENST00000539843 AMPHP49418 695 aa21.37■■□□□ 1.01
UBE3B-211ENST00000539843 DCAF8L1A6NGE4 600 aa21.36■■□□□ 1.01
UBE3B-211ENST00000539843 STK32BQ9NY57 414 aa21.36■■□□□ 1.01
UBE3B-211ENST00000539843 SBF2Q86WG5 1849 aa21.36■■□□□ 1.01
UBE3B-211ENST00000539843 KCNQ2O43526 872 aa21.35■■□□□ 1.01
UBE3B-211ENST00000539843 LTV1Q96GA3 475 aaPredicted RBP21.35■■□□□ 1.01
UBE3B-211ENST00000539843 TIMELESSQ9UNS1 1208 aa21.35■■□□□ 1.01
UBE3B-211ENST00000539843 TXNRD1Q16881 649 aa21.33■■□□□ 1.01
UBE3B-211ENST00000539843 ACSBG1Q96GR2 724 aa21.32■■□□□ 1
UBE3B-211ENST00000539843 FAM208AQ9UK61 1670 aaKnown RBP21.31■■□□□ 1
UBE3B-211ENST00000539843 SMG6Q86US8 1419 aaKnown RBP21.31■■□□□ 1
UBE3B-211ENST00000539843 PTF1AQ7RTS3 328 aa21.31■■□□□ 1
UBE3B-211ENST00000539843 RTL1A6NKG5 1358 aa21.31■■□□□ 1
UBE3B-211ENST00000539843 MAP3K19Q56UN5 1328 aa21.3■■□□□ 1
UBE3B-211ENST00000539843 CLSPNQ9HAW4 1339 aa21.3■■□□□ 1
UBE3B-211ENST00000539843 HOXC9P31274 260 aa21.29■■□□□ 1
UBE3B-211ENST00000539843 ANO8Q9HCE9 1232 aaPredicted RBP21.29■■□□□ 1
UBE3B-211ENST00000539843 NHSQ6T4R5 1651 aa21.28■■□□□ 1
UBE3B-211ENST00000539843 DDX54Q8TDD1 881 aaKnown RBP21.28■■□□□ 1
UBE3B-211ENST00000539843 SLC15A2Q16348 729 aa21.27■■□□□ 1
UBE3B-211ENST00000539843 PROM2Q8N271 834 aa21.26■□□□□ 0.99
UBE3B-211ENST00000539843 GGNBP2Q9H3C7 697 aa21.26■□□□□ 0.99
UBE3B-211ENST00000539843 PCGF6Q9BYE7 350 aa21.25■□□□□ 0.99
UBE3B-211ENST00000539843 FYB1O15117 783 aa21.24■□□□□ 0.99
UBE3B-211ENST00000539843 RRS1Q15050 365 aaKnown RBP21.23■□□□□ 0.99
UBE3B-211ENST00000539843 RAPGEF4Q8WZA2 1011 aa21.23■□□□□ 0.99
UBE3B-211ENST00000539843 SYTL4Q96C24 671 aaPredicted RBP21.23■□□□□ 0.99
UBE3B-211ENST00000539843 CGNL1Q0VF96 1302 aa21.23■□□□□ 0.99
UBE3B-211ENST00000539843 ZBTB7AO95365 584 aa21.22■□□□□ 0.99
UBE3B-211ENST00000539843 ZCRB1Q8TBF4 217 aaKnown RBP21.22■□□□□ 0.99
UBE3B-211ENST00000539843 KIF24Q5T7B8 1368 aa21.21■□□□□ 0.99
UBE3B-211ENST00000539843 SLC27A3Q5K4L6 730 aa21.2■□□□□ 0.98
UBE3B-211ENST00000539843 MTFR1LQ9H019 292 aa21.2■□□□□ 0.98
UBE3B-211ENST00000539843 FLT4P35916 1363 aa21.2■□□□□ 0.98
UBE3B-211ENST00000539843 TATP17735 454 aaPredicted RBP21.19■□□□□ 0.98
UBE3B-211ENST00000539843 FBLN1P23142 703 aa21.19■□□□□ 0.98
UBE3B-211ENST00000539843 CASZ1Q86V15 1759 aa21.18■□□□□ 0.98
UBE3B-211ENST00000539843 INSRP06213 1382 aa21.18■□□□□ 0.98
UBE3B-211ENST00000539843 NSD3Q9BZ95 1437 aa21.18■□□□□ 0.98
UBE3B-211ENST00000539843 HMGB2P26583 209 aaKnown RBP21.17■□□□□ 0.98
UBE3B-211ENST00000539843 ATF5Q9Y2D1 282 aaPredicted RBP21.17■□□□□ 0.98
UBE3B-211ENST00000539843 BTAF1O14981 1849 aa21.16■□□□□ 0.98
UBE3B-211ENST00000539843 KIF20BQ96Q89 1820 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms