RNA–Protein interactions for RNA: ENST00000539832.1

AC078878.1-201, humanhuman

BASIC

Gene AC078878.1, Length 958 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078878.1-201ENST00000539832 CD2BP2O95400 341 aaKnown RBP11.59□□□□□ -0.55
AC078878.1-201ENST00000539832 VARSP26640 1264 aaKnown RBP11.59□□□□□ -0.55
AC078878.1-201ENST00000539832 USP17L2Q6R6M4 530 aa11.59□□□□□ -0.55
AC078878.1-201ENST00000539832 USP17L1Q7RTZ2 530 aa11.59□□□□□ -0.55
AC078878.1-201ENST00000539832 CDV3Q9UKY7 258 aaKnown RBP11.59□□□□□ -0.55
AC078878.1-201ENST00000539832 ESPNB1AK53 854 aa11.58□□□□□ -0.56
AC078878.1-201ENST00000539832 KANK4Q5T7N3 995 aaPredicted RBP11.58□□□□□ -0.56
AC078878.1-201ENST00000539832 PLPP7Q8NBV4 271 aa11.58□□□□□ -0.56
AC078878.1-201ENST00000539832 RETREG2Q8NC44 543 aa11.58□□□□□ -0.56
AC078878.1-201ENST00000539832 ACIN1Q9UKV3 1341 aaKnown RBP11.58□□□□□ -0.56
AC078878.1-201ENST00000539832 GIGYF1O75420 1035 aaPredicted RBP11.57□□□□□ -0.56
AC078878.1-201ENST00000539832 NBPF20Q3BBV1 942 aa11.57□□□□□ -0.56
AC078878.1-201ENST00000539832 MAP7D1Q3KQU3 841 aa11.57□□□□□ -0.56
AC078878.1-201ENST00000539832 LZTS3O60299 673 aaPredicted RBP11.56□□□□□ -0.56
AC078878.1-201ENST00000539832 TRAF7Q6Q0C0 670 aa11.56□□□□□ -0.56
AC078878.1-201ENST00000539832 MAP4K5Q9Y4K4 846 aa11.56□□□□□ -0.56
AC078878.1-201ENST00000539832 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
AC078878.1-201ENST00000539832 ATG7O95352 703 aa11.54□□□□□ -0.56
AC078878.1-201ENST00000539832 SLC19A1P41440 591 aa11.54□□□□□ -0.56
AC078878.1-201ENST00000539832 TSGA10IPQ3SY00 556 aa11.54□□□□□ -0.56
AC078878.1-201ENST00000539832 RC3H1Q5TC82 1133 aaKnown RBP11.54□□□□□ -0.56
AC078878.1-201ENST00000539832 SEPT12Q8IYM1 358 aa11.54□□□□□ -0.56
AC078878.1-201ENST00000539832 EHBP1Q8NDI1 1231 aa11.54□□□□□ -0.56
AC078878.1-201ENST00000539832 CCDC85AQ96PX6 553 aaPredicted RBP11.54□□□□□ -0.56
AC078878.1-201ENST00000539832 VRTNQ9H8Y1 702 aa11.54□□□□□ -0.56
AC078878.1-201ENST00000539832 PLA2G2EQ9NZK7 142 aa11.54□□□□□ -0.56
AC078878.1-201ENST00000539832 NCOA4Q13772 614 aa11.53□□□□□ -0.56
AC078878.1-201ENST00000539832 CCDC125Q86Z20 511 aa11.53□□□□□ -0.56
AC078878.1-201ENST00000539832 DEPDC4Q8N2C3 294 aa11.53□□□□□ -0.56
AC078878.1-201ENST00000539832 CDK15Q96Q40 435 aa11.53□□□□□ -0.56
AC078878.1-201ENST00000539832 A0A0G2JS52 829 aa11.52□□□□□ -0.57
AC078878.1-201ENST00000539832 PDIA4P13667 645 aaKnown RBP11.52□□□□□ -0.57
AC078878.1-201ENST00000539832 MPNDQ8N594 471 aa11.52□□□□□ -0.57
AC078878.1-201ENST00000539832 KCTD15Q96SI1 283 aaPredicted RBP11.52□□□□□ -0.57
AC078878.1-201ENST00000539832 TRAIPQ9BWF2 469 aa11.52□□□□□ -0.57
AC078878.1-201ENST00000539832 CDCA8Q53HL2 280 aa11.51□□□□□ -0.57
AC078878.1-201ENST00000539832 DOLKQ9UPQ8 538 aa11.51□□□□□ -0.57
AC078878.1-201ENST00000539832 WNT7AO00755 349 aa11.5□□□□□ -0.57
AC078878.1-201ENST00000539832 SIAH2O43255 324 aa11.5□□□□□ -0.57
AC078878.1-201ENST00000539832 MKRN1Q9UHC7 482 aaKnown RBP11.5□□□□□ -0.57
AC078878.1-201ENST00000539832 ELOAQ14241 798 aaKnown RBP11.49□□□□□ -0.57
AC078878.1-201ENST00000539832 SPRYD7Q5W111 196 aa11.49□□□□□ -0.57
AC078878.1-201ENST00000539832 VASH1Q7L8A9 365 aaPredicted RBP11.49□□□□□ -0.57
AC078878.1-201ENST00000539832 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
AC078878.1-201ENST00000539832 ATP5J2-PTCD1G3V325 749 aa11.48□□□□□ -0.57
AC078878.1-201ENST00000539832 EML3Q32P44 896 aa11.48□□□□□ -0.57
AC078878.1-201ENST00000539832 FAM196BA6NMK8 535 aa11.47□□□□□ -0.57
AC078878.1-201ENST00000539832 CSB-PGBD3P0DP91 1061 aa11.47□□□□□ -0.57
AC078878.1-201ENST00000539832 GRM5P41594 1212 aa11.47□□□□□ -0.57
AC078878.1-201ENST00000539832 PDE4CQ08493 712 aa11.47□□□□□ -0.57
AC078878.1-201ENST00000539832 INTS6LQ5JSJ4 861 aaKnown RBP11.47□□□□□ -0.57
AC078878.1-201ENST00000539832 CDCA7Q9BWT1 371 aaPredicted RBP11.47□□□□□ -0.57
AC078878.1-201ENST00000539832 MRGPRX2Q96LB1 330 aa11.46□□□□□ -0.57
AC078878.1-201ENST00000539832 NOD1Q9Y239 953 aa11.46□□□□□ -0.57
AC078878.1-201ENST00000539832 TLL2Q9Y6L7 1015 aa11.46□□□□□ -0.57
AC078878.1-201ENST00000539832 CRTC2Q53ET0 693 aaPredicted RBP11.45□□□□□ -0.58
AC078878.1-201ENST00000539832 ZMIZ1Q9ULJ6 1067 aa11.45□□□□□ -0.58
AC078878.1-201ENST00000539832 PCDHB11Q9Y5F2 797 aa11.45□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L15C9J2P7 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L10C9JJH3 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L13C9JLJ4 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L12C9JPN9 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L11C9JVI0 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L21D6R901 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L18D6R9N7 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L22D6RA61 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L17D6RBQ6 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L19D6RCP7 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L20D6RJB6 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 USP17L24Q0WX57 530 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 PTK7Q13308 1070 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 ARID5BQ14865 1188 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 OXLD1Q5BKU9 147 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 ZNF598Q86UK7 904 aaKnown RBP11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 TRIM50Q86XT4 487 aa11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 V9GY48 417 aaPredicted RBP11.44□□□□□ -0.58
AC078878.1-201ENST00000539832 ERVH48-1M5A8F1 160 aa11.43□□□□□ -0.58
AC078878.1-201ENST00000539832 ADH1CP00326 375 aa11.43□□□□□ -0.58
AC078878.1-201ENST00000539832 RASA1P20936 1047 aa11.43□□□□□ -0.58
AC078878.1-201ENST00000539832 CLDN10P78369 228 aa11.43□□□□□ -0.58
AC078878.1-201ENST00000539832 NOVA2Q9UNW9 492 aaKnown RBP11.43□□□□□ -0.58
AC078878.1-201ENST00000539832 TMEM88BA6NKF7 163 aa11.42□□□□□ -0.58
AC078878.1-201ENST00000539832 FSHRP23945 695 aa11.42□□□□□ -0.58
AC078878.1-201ENST00000539832 USP4Q13107 963 aa11.42□□□□□ -0.58
AC078878.1-201ENST00000539832 ZNF697Q5TEC3 545 aa11.42□□□□□ -0.58
AC078878.1-201ENST00000539832 LARP1Q6PKG0 1096 aaKnown RBP11.42□□□□□ -0.58
AC078878.1-201ENST00000539832 OGFOD1Q8N543 542 aa11.42□□□□□ -0.58
AC078878.1-201ENST00000539832 SIRT1Q96EB6 747 aa11.42□□□□□ -0.58
AC078878.1-201ENST00000539832 ATP1A2P50993 1020 aa11.41□□□□□ -0.58
AC078878.1-201ENST00000539832 RAB15P59190 212 aa11.41□□□□□ -0.58
AC078878.1-201ENST00000539832 NR5A1Q13285 461 aa11.41□□□□□ -0.58
AC078878.1-201ENST00000539832 PRKD2Q9BZL6 878 aa11.41□□□□□ -0.58
AC078878.1-201ENST00000539832 PKD2L1Q9P0L9 805 aa11.41□□□□□ -0.58
AC078878.1-201ENST00000539832 LARGE2Q8N3Y3 721 aa11.4□□□□□ -0.58
AC078878.1-201ENST00000539832 STK32AQ8WU08 396 aa11.4□□□□□ -0.58
AC078878.1-201ENST00000539832 DNAAF2Q9NVR5 837 aaKnown RBP11.4□□□□□ -0.58
AC078878.1-201ENST00000539832 PCDHGA11Q9Y5H2 935 aa11.4□□□□□ -0.58
AC078878.1-201ENST00000539832 ZBTB7BO15156 539 aaPredicted RBP11.39□□□□□ -0.59
AC078878.1-201ENST00000539832 DKK1O94907 266 aa11.39□□□□□ -0.59
AC078878.1-201ENST00000539832 ERVK-9P63128 1117 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms