RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 MARF1Q9Y4F3 1742 aaKnown RBP22.26■■□□□ 1.15
PCDHB17P-201ENST00000539533 EIF4A2Q14240 407 aaKnown RBP22.26■■□□□ 1.15
PCDHB17P-201ENST00000539533 NOP58Q9Y2X3 529 aaKnown RBP22.25■■□□□ 1.15
PCDHB17P-201ENST00000539533 NCOA3Q9Y6Q9 1424 aa22.24■■□□□ 1.15
PCDHB17P-201ENST00000539533 NCBP3Q53F19 620 aaKnown RBP22.24■■□□□ 1.15
PCDHB17P-201ENST00000539533 RRP1P56182 461 aaKnown RBP22.24■■□□□ 1.15
PCDHB17P-201ENST00000539533 PHACTR3Q96KR7 559 aa22.24■■□□□ 1.15
PCDHB17P-201ENST00000539533 WDR63Q8IWG1 891 aa22.23■■□□□ 1.15
PCDHB17P-201ENST00000539533 MST1RQ04912 1400 aa22.23■■□□□ 1.15
PCDHB17P-201ENST00000539533 ZNF335Q9H4Z2 1342 aaPredicted RBP22.23■■□□□ 1.15
PCDHB17P-201ENST00000539533 TRIM35Q9UPQ4 493 aa22.23■■□□□ 1.15
PCDHB17P-201ENST00000539533 RIPK4P57078 832 aa22.22■■□□□ 1.15
PCDHB17P-201ENST00000539533 AMPHP49418 695 aa22.21■■□□□ 1.15
PCDHB17P-201ENST00000539533 USP54Q70EL1 1684 aa22.21■■□□□ 1.15
PCDHB17P-201ENST00000539533 SBNO1A3KN83 1393 aa22.21■■□□□ 1.15
PCDHB17P-201ENST00000539533 FLT4P35916 1363 aa22.2■■□□□ 1.14
PCDHB17P-201ENST00000539533 DCCP43146 1447 aa22.2■■□□□ 1.14
PCDHB17P-201ENST00000539533 KRT28Q7Z3Y7 464 aa22.2■■□□□ 1.14
PCDHB17P-201ENST00000539533 CADPS2Q86UW7 1296 aa22.2■■□□□ 1.14
PCDHB17P-201ENST00000539533 NEFMP07197 916 aa22.19■■□□□ 1.14
PCDHB17P-201ENST00000539533 AEBP1Q8IUX7 1158 aa22.19■■□□□ 1.14
PCDHB17P-201ENST00000539533 XIRP1Q702N8 1843 aaKnown RBP22.19■■□□□ 1.14
PCDHB17P-201ENST00000539533 MSH6P52701 1360 aa22.19■■□□□ 1.14
PCDHB17P-201ENST00000539533 SULT6B1Q6IMI4 303 aa22.18■■□□□ 1.14
PCDHB17P-201ENST00000539533 PLIN1O60240 522 aa22.18■■□□□ 1.14
PCDHB17P-201ENST00000539533 DDX17Q92841 729 aaKnown RBP22.18■■□□□ 1.14
PCDHB17P-201ENST00000539533 LMOD2Q6P5Q4 547 aa22.17■■□□□ 1.14
PCDHB17P-201ENST00000539533 KIF1AQ12756 1690 aa22.17■■□□□ 1.14
PCDHB17P-201ENST00000539533 PLEKHG5O94827 1062 aa22.17■■□□□ 1.14
PCDHB17P-201ENST00000539533 PRKCSHP14314 528 aaPredicted RBP22.16■■□□□ 1.14
PCDHB17P-201ENST00000539533 HOXC9P31274 260 aa22.16■■□□□ 1.14
PCDHB17P-201ENST00000539533 NFE2L2Q16236 605 aa22.15■■□□□ 1.14
PCDHB17P-201ENST00000539533 NBR1Q14596 966 aa22.14■■□□□ 1.14
PCDHB17P-201ENST00000539533 TRPM3Q9HCF6 1732 aaPredicted RBP22.14■■□□□ 1.13
PCDHB17P-201ENST00000539533 ANP32AP39687 249 aaKnown RBP22.13■■□□□ 1.13
PCDHB17P-201ENST00000539533 RGPD1P0DJD0 1748 aa22.13■■□□□ 1.13
PCDHB17P-201ENST00000539533 NFAT5O94916 1531 aa22.12■■□□□ 1.13
PCDHB17P-201ENST00000539533 KIF24Q5T7B8 1368 aa22.12■■□□□ 1.13
PCDHB17P-201ENST00000539533 KCNH5Q8NCM2 988 aa22.11■■□□□ 1.13
PCDHB17P-201ENST00000539533 IPO9Q96P70 1041 aaKnown RBP22.11■■□□□ 1.13
PCDHB17P-201ENST00000539533 EYA1Q99502 592 aa22.11■■□□□ 1.13
PCDHB17P-201ENST00000539533 MYH16Q9H6N6 1097 aa22.11■■□□□ 1.13
PCDHB17P-201ENST00000539533 TSR2Q969E8 191 aaKnown RBP22.11■■□□□ 1.13
PCDHB17P-201ENST00000539533 GCP02774 474 aa22.1■■□□□ 1.13
PCDHB17P-201ENST00000539533 LTN1O94822 1766 aa22.1■■□□□ 1.13
PCDHB17P-201ENST00000539533 ZBTB7CA1YPR0 619 aa22.1■■□□□ 1.13
PCDHB17P-201ENST00000539533 LTV1Q96GA3 475 aaPredicted RBP22.1■■□□□ 1.13
PCDHB17P-201ENST00000539533 BCAR3O75815 825 aa22.09■■□□□ 1.13
PCDHB17P-201ENST00000539533 ARHGEF10O15013 1369 aa22.09■■□□□ 1.13
PCDHB17P-201ENST00000539533 THUMPD2Q9BTF0 503 aaKnown RBP22.09■■□□□ 1.13
PCDHB17P-201ENST00000539533 EXOC6Q8TAG9 804 aa22.07■■□□□ 1.12
PCDHB17P-201ENST00000539533 IP6K1Q92551 441 aa22.07■■□□□ 1.12
PCDHB17P-201ENST00000539533 IL16Q14005 1332 aa22.07■■□□□ 1.12
PCDHB17P-201ENST00000539533 IGSF1Q8N6C5 1336 aa22.07■■□□□ 1.12
PCDHB17P-201ENST00000539533 NPHP3Q7Z494 1330 aa22.07■■□□□ 1.12
PCDHB17P-201ENST00000539533 C20orf194Q5TEA3 1177 aa22.06■■□□□ 1.12
PCDHB17P-201ENST00000539533 DLG5Q8TDM6 1919 aa22.06■■□□□ 1.12
PCDHB17P-201ENST00000539533 BRINP3Q76B58 766 aa22.06■■□□□ 1.12
PCDHB17P-201ENST00000539533 USP19O94966 1318 aa22.06■■□□□ 1.12
PCDHB17P-201ENST00000539533 RTL1A6NKG5 1358 aa22.06■■□□□ 1.12
PCDHB17P-201ENST00000539533 SLIT3O75094 1523 aa22.05■■□□□ 1.12
PCDHB17P-201ENST00000539533 FAM83GA6ND36 823 aa22.05■■□□□ 1.12
PCDHB17P-201ENST00000539533 SLAIN2Q9P270 581 aa22.05■■□□□ 1.12
PCDHB17P-201ENST00000539533 KDRP35968 1356 aa22.05■■□□□ 1.12
PCDHB17P-201ENST00000539533 ALS2Q96Q42 1657 aa22.05■■□□□ 1.12
PCDHB17P-201ENST00000539533 ARHGEF25Q86VW2 580 aa22.04■■□□□ 1.12
PCDHB17P-201ENST00000539533 EXOSC9Q06265 439 aaKnown RBP22.03■■□□□ 1.12
PCDHB17P-201ENST00000539533 DCTN1Q14203 1278 aa22.03■■□□□ 1.12
PCDHB17P-201ENST00000539533 LAS1LQ9Y4W2 734 aaKnown RBP22.03■■□□□ 1.12
PCDHB17P-201ENST00000539533 ZBTB47Q9UFB7 747 aaPredicted RBP22.03■■□□□ 1.12
PCDHB17P-201ENST00000539533 RARSP54136 660 aaKnown RBP22.02■■□□□ 1.12
PCDHB17P-201ENST00000539533 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.01■■□□□ 1.11
PCDHB17P-201ENST00000539533 CRBNQ96SW2 442 aa22.01■■□□□ 1.11
PCDHB17P-201ENST00000539533 PXDNQ92626 1479 aa22.01■■□□□ 1.11
PCDHB17P-201ENST00000539533 LMOD3Q0VAK6 560 aa22.01■■□□□ 1.11
PCDHB17P-201ENST00000539533 USHBP1Q8N6Y0 703 aa22.01■■□□□ 1.11
PCDHB17P-201ENST00000539533 MED1Q15648 1581 aaPredicted RBP22■■□□□ 1.11
PCDHB17P-201ENST00000539533 MTHFSDQ2M296 383 aaKnown RBP22■■□□□ 1.11
PCDHB17P-201ENST00000539533 ZC3H6P61129 1189 aaKnown RBP21.99■■□□□ 1.11
PCDHB17P-201ENST00000539533 CABLES1Q8TDN4 633 aa21.99■■□□□ 1.11
PCDHB17P-201ENST00000539533 PHRF1Q9P1Y6 1649 aaKnown RBP21.99■■□□□ 1.11
PCDHB17P-201ENST00000539533 NBPF6Q5VWK0 638 aa21.98■■□□□ 1.11
PCDHB17P-201ENST00000539533 NBPF4Q96M43 638 aa21.98■■□□□ 1.11
PCDHB17P-201ENST00000539533 BCL2L13Q9BXK5 485 aa21.98■■□□□ 1.11
PCDHB17P-201ENST00000539533 SPATA31A3Q5VYP0 1347 aa21.98■■□□□ 1.11
PCDHB17P-201ENST00000539533 TNS3Q68CZ2 1445 aa21.98■■□□□ 1.11
PCDHB17P-201ENST00000539533 CALD1Q05682 793 aaKnown RBP21.98■■□□□ 1.11
PCDHB17P-201ENST00000539533 AXIN2Q9Y2T1 843 aa21.98■■□□□ 1.11
PCDHB17P-201ENST00000539533 TCERG1O14776 1098 aaKnown RBP21.97■■□□□ 1.11
PCDHB17P-201ENST00000539533 MCM10Q7L590 875 aa21.97■■□□□ 1.11
PCDHB17P-201ENST00000539533 ZNF853P0CG23 659 aa21.96■■□□□ 1.11
PCDHB17P-201ENST00000539533 LRRC59Q96AG4 307 aaKnown RBP21.96■■□□□ 1.11
PCDHB17P-201ENST00000539533 IFT57Q9NWB7 429 aa21.96■■□□□ 1.11
PCDHB17P-201ENST00000539533 GNAI1P63096 354 aa21.96■■□□□ 1.11
PCDHB17P-201ENST00000539533 CT47B1P0C2W7 299 aaPredicted RBP21.95■■□□□ 1.1
PCDHB17P-201ENST00000539533 FRAT1Q92837 279 aaPredicted RBP21.95■■□□□ 1.1
PCDHB17P-201ENST00000539533 CFAP44Q96MT7 982 aa21.95■■□□□ 1.1
PCDHB17P-201ENST00000539533 MBIPQ9NS73 344 aa21.95■■□□□ 1.1
PCDHB17P-201ENST00000539533 RTL5Q5HYW3 569 aaPredicted RBP21.94■■□□□ 1.1
PCDHB17P-201ENST00000539533 RGPD2P0DJD1 1756 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms