RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 DDB1Q16531 1140 aa19.83■□□□□ 0.77
CCND1-204ENST00000539241 OVOS2A0A0G2JMS6 1433 aa19.83■□□□□ 0.76
CCND1-204ENST00000539241 OVOS2A0A0J9YW53 1432 aa19.83■□□□□ 0.76
CCND1-204ENST00000539241 OVOS2Q6IE36 1432 aa19.83■□□□□ 0.76
CCND1-204ENST00000539241 PARP4Q9UKK3 1724 aaKnown RBP19.82■□□□□ 0.76
CCND1-204ENST00000539241 CSB-PGBD3P0DP91 1061 aa19.82■□□□□ 0.76
CCND1-204ENST00000539241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.82■□□□□ 0.76
CCND1-204ENST00000539241 TMC1Q8TDI8 760 aa19.82■□□□□ 0.76
CCND1-204ENST00000539241 AKAP12Q02952 1782 aa19.82■□□□□ 0.76
CCND1-204ENST00000539241 COL18A1P39060 1754 aa19.81■□□□□ 0.76
CCND1-204ENST00000539241 NFAT5O94916 1531 aa19.81■□□□□ 0.76
CCND1-204ENST00000539241 CDCA7Q9BWT1 371 aaPredicted RBP19.8■□□□□ 0.76
CCND1-204ENST00000539241 CARD10Q9BWT7 1032 aa19.8■□□□□ 0.76
CCND1-204ENST00000539241 USP31Q70CQ4 1352 aa19.8■□□□□ 0.76
CCND1-204ENST00000539241 HDGFL2Q7Z4V5 671 aaPredicted RBP19.79■□□□□ 0.76
CCND1-204ENST00000539241 SLC12A5Q9H2X9 1139 aa19.79■□□□□ 0.76
CCND1-204ENST00000539241 CD163L1Q9NR16 1453 aa19.79■□□□□ 0.76
CCND1-204ENST00000539241 NBPF14Q5TI25 921 aa19.78■□□□□ 0.76
CCND1-204ENST00000539241 NME9Q86XW9 330 aa19.78■□□□□ 0.76
CCND1-204ENST00000539241 LRRC37A3O60309 1634 aa19.77■□□□□ 0.76
CCND1-204ENST00000539241 MARCH10Q8NA82 808 aaPredicted RBP19.76■□□□□ 0.75
CCND1-204ENST00000539241 PUS7Q96PZ0 661 aaKnown RBP19.76■□□□□ 0.75
CCND1-204ENST00000539241 MON2Q7Z3U7 1717 aa19.76■□□□□ 0.75
CCND1-204ENST00000539241 CCDC7Q96M83 1385 aa19.75■□□□□ 0.75
CCND1-204ENST00000539241 TERF2IPQ9NYB0 399 aa19.75■□□□□ 0.75
CCND1-204ENST00000539241 ABCC6O95255 1503 aa19.75■□□□□ 0.75
CCND1-204ENST00000539241 EDC4Q6P2E9 1401 aaKnown RBP19.75■□□□□ 0.75
CCND1-204ENST00000539241 PEAK1Q9H792 1746 aa19.74■□□□□ 0.75
CCND1-204ENST00000539241 BCL11BQ9C0K0 894 aaPredicted RBP19.74■□□□□ 0.75
CCND1-204ENST00000539241 RREB1Q92766 1687 aa19.74■□□□□ 0.75
CCND1-204ENST00000539241 CLSPNQ9HAW4 1339 aa19.74■□□□□ 0.75
CCND1-204ENST00000539241 A0A1W2PP64 1363 aa19.73■□□□□ 0.75
CCND1-204ENST00000539241 PLSCR1O15162 318 aa19.73■□□□□ 0.75
CCND1-204ENST00000539241 BCL9O00512 1426 aa19.73■□□□□ 0.75
CCND1-204ENST00000539241 ERBB3P21860 1342 aa19.73■□□□□ 0.75
CCND1-204ENST00000539241 ST20-MTHFSA0A0A6YYL1 179 aa19.72■□□□□ 0.75
CCND1-204ENST00000539241 EXOC5O00471 708 aa19.72■□□□□ 0.75
CCND1-204ENST00000539241 PTF1AQ7RTS3 328 aa19.72■□□□□ 0.75
CCND1-204ENST00000539241 TESK2Q96S53 571 aa19.72■□□□□ 0.75
CCND1-204ENST00000539241 NUP188Q5SRE5 1749 aa19.71■□□□□ 0.75
CCND1-204ENST00000539241 CCER1Q8TC90 406 aaPredicted RBP19.7■□□□□ 0.74
CCND1-204ENST00000539241 NLRP2Q9NX02 1062 aa19.7■□□□□ 0.74
CCND1-204ENST00000539241 NINLQ9Y2I6 1382 aa19.7■□□□□ 0.74
CCND1-204ENST00000539241 USP54Q70EL1 1684 aa19.69■□□□□ 0.74
CCND1-204ENST00000539241 WNK3Q9BYP7 1800 aa19.69■□□□□ 0.74
CCND1-204ENST00000539241 TNS2Q63HR2 1409 aa19.68■□□□□ 0.74
CCND1-204ENST00000539241 RGPD5Q99666 1765 aa19.68■□□□□ 0.74
CCND1-204ENST00000539241 SLC24A1O60721 1099 aa19.68■□□□□ 0.74
CCND1-204ENST00000539241 ANKRD24Q8TF21 1146 aa19.68■□□□□ 0.74
CCND1-204ENST00000539241 ANO8Q9HCE9 1232 aaPredicted RBP19.67■□□□□ 0.74
CCND1-204ENST00000539241 IL2RBP14784 551 aa19.66■□□□□ 0.74
CCND1-204ENST00000539241 PROM2Q8N271 834 aa19.65■□□□□ 0.74
CCND1-204ENST00000539241 SPON1Q9HCB6 807 aa19.64■□□□□ 0.73
CCND1-204ENST00000539241 RGPD3A6NKT7 1758 aaPredicted RBP19.64■□□□□ 0.73
CCND1-204ENST00000539241 RGPD4Q7Z3J3 1758 aa19.64■□□□□ 0.73
CCND1-204ENST00000539241 SBF2Q86WG5 1849 aa19.64■□□□□ 0.73
CCND1-204ENST00000539241 KCNQ2O43526 872 aa19.63■□□□□ 0.73
CCND1-204ENST00000539241 IP6K1Q92551 441 aa19.63■□□□□ 0.73
CCND1-204ENST00000539241 COG3Q96JB2 828 aa19.63■□□□□ 0.73
CCND1-204ENST00000539241 ANKRD36BQ8N2N9 1353 aa19.61■□□□□ 0.73
CCND1-204ENST00000539241 TXNRD1Q16881 649 aa19.61■□□□□ 0.73
CCND1-204ENST00000539241 ACSBG1Q96GR2 724 aa19.61■□□□□ 0.73
CCND1-204ENST00000539241 USP47Q96K76 1375 aa19.6■□□□□ 0.73
CCND1-204ENST00000539241 TMF1P82094 1093 aa19.6■□□□□ 0.73
CCND1-204ENST00000539241 LTV1Q96GA3 475 aaPredicted RBP19.6■□□□□ 0.73
CCND1-204ENST00000539241 PPP1R1BQ9UD71 204 aaPredicted RBP19.6■□□□□ 0.73
CCND1-204ENST00000539241 LTN1O94822 1766 aa19.6■□□□□ 0.73
CCND1-204ENST00000539241 MAP3K19Q56UN5 1328 aa19.59■□□□□ 0.73
CCND1-204ENST00000539241 STK32BQ9NY57 414 aa19.58■□□□□ 0.72
CCND1-204ENST00000539241 FBLN1P23142 703 aa19.57■□□□□ 0.72
CCND1-204ENST00000539241 HOXC9P31274 260 aa19.57■□□□□ 0.72
CCND1-204ENST00000539241 AMPHP49418 695 aa19.57■□□□□ 0.72
CCND1-204ENST00000539241 PDGFDQ9GZP0 370 aaPredicted RBP19.56■□□□□ 0.72
CCND1-204ENST00000539241 SLC15A2Q16348 729 aa19.55■□□□□ 0.72
CCND1-204ENST00000539241 NHSQ6T4R5 1651 aa19.53■□□□□ 0.72
CCND1-204ENST00000539241 FYB1O15117 783 aa19.53■□□□□ 0.72
CCND1-204ENST00000539241 ZBTB7AO95365 584 aa19.53■□□□□ 0.72
CCND1-204ENST00000539241 CDCA8Q53HL2 280 aa19.53■□□□□ 0.72
CCND1-204ENST00000539241 DDX54Q8TDD1 881 aaKnown RBP19.53■□□□□ 0.72
CCND1-204ENST00000539241 GGNBP2Q9H3C7 697 aa19.53■□□□□ 0.72
CCND1-204ENST00000539241 RRS1Q15050 365 aaKnown RBP19.52■□□□□ 0.72
CCND1-204ENST00000539241 TIMELESSQ9UNS1 1208 aa19.52■□□□□ 0.72
CCND1-204ENST00000539241 RTL1A6NKG5 1358 aa19.52■□□□□ 0.72
CCND1-204ENST00000539241 CASZ1Q86V15 1759 aa19.51■□□□□ 0.71
CCND1-204ENST00000539241 ATF5Q9Y2D1 282 aaPredicted RBP19.49■□□□□ 0.71
CCND1-204ENST00000539241 FAM208AQ9UK61 1670 aaKnown RBP19.49■□□□□ 0.71
CCND1-204ENST00000539241 PTGER2P43116 358 aa19.48■□□□□ 0.71
CCND1-204ENST00000539241 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
CCND1-204ENST00000539241 ZCRB1Q8TBF4 217 aaKnown RBP19.47■□□□□ 0.71
CCND1-204ENST00000539241 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
CCND1-204ENST00000539241 MEGF6O75095 1541 aa19.46■□□□□ 0.71
CCND1-204ENST00000539241 SYTL4Q96C24 671 aaPredicted RBP19.46■□□□□ 0.71
CCND1-204ENST00000539241 MTFR1LQ9H019 292 aa19.46■□□□□ 0.71
CCND1-204ENST00000539241 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
CCND1-204ENST00000539241 SMG6Q86US8 1419 aaKnown RBP19.45■□□□□ 0.7
CCND1-204ENST00000539241 DCAF8L1A6NGE4 600 aa19.45■□□□□ 0.7
CCND1-204ENST00000539241 ZNF827Q17R98 1081 aa19.45■□□□□ 0.7
CCND1-204ENST00000539241 USHBP1Q8N6Y0 703 aa19.45■□□□□ 0.7
CCND1-204ENST00000539241 BTAF1O14981 1849 aa19.44■□□□□ 0.7
CCND1-204ENST00000539241 PRIM1P49642 420 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms