RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 TOM1L2Q6ZVM7 507 aa21.31■■□□□ 1
CCDC144NL-202ENST00000539177 PLSCR1O15162 318 aa21.3■■□□□ 1
CCDC144NL-202ENST00000539177 NLRP6P59044 892 aa21.3■■□□□ 1
CCDC144NL-202ENST00000539177 BCL11BQ9C0K0 894 aaPredicted RBP21.3■■□□□ 1
CCDC144NL-202ENST00000539177 USP6P35125 1406 aa21.29■■□□□ 1
CCDC144NL-202ENST00000539177 AATKQ6ZMQ8 1374 aa21.29■■□□□ 1
CCDC144NL-202ENST00000539177 ZBTB7AO95365 584 aa21.29■■□□□ 1
CCDC144NL-202ENST00000539177 CENPJQ9HC77 1338 aaPredicted RBP21.28■■□□□ 1
CCDC144NL-202ENST00000539177 CHD4Q14839 1912 aa21.27■■□□□ 1
CCDC144NL-202ENST00000539177 MARCH10Q8NA82 808 aaPredicted RBP21.26■□□□□ 0.99
CCDC144NL-202ENST00000539177 BRD4O60885 1362 aaPredicted RBP21.25■□□□□ 0.99
CCDC144NL-202ENST00000539177 PROM2Q8N271 834 aa21.25■□□□□ 0.99
CCDC144NL-202ENST00000539177 CABP1Q9NZU7 370 aa21.25■□□□□ 0.99
CCDC144NL-202ENST00000539177 ATF5Q9Y2D1 282 aaPredicted RBP21.25■□□□□ 0.99
CCDC144NL-202ENST00000539177 AXIN2Q9Y2T1 843 aa21.25■□□□□ 0.99
CCDC144NL-202ENST00000539177 WDR17Q8IZU2 1322 aa21.25■□□□□ 0.99
CCDC144NL-202ENST00000539177 CPSF1Q10570 1443 aaKnown RBP21.24■□□□□ 0.99
CCDC144NL-202ENST00000539177 SOX12O15370 315 aa21.23■□□□□ 0.99
CCDC144NL-202ENST00000539177 PTGER2P43116 358 aa21.22■□□□□ 0.99
CCDC144NL-202ENST00000539177 NHSQ6T4R5 1651 aa21.21■□□□□ 0.99
CCDC144NL-202ENST00000539177 STK32BQ9NY57 414 aa21.21■□□□□ 0.99
CCDC144NL-202ENST00000539177 TRPM1Q7Z4N2 1603 aa21.21■□□□□ 0.99
CCDC144NL-202ENST00000539177 KAT6BQ8WYB5 2073 aa21.2■□□□□ 0.99
CCDC144NL-202ENST00000539177 CSB-PGBD3P0DP91 1061 aa21.2■□□□□ 0.98
CCDC144NL-202ENST00000539177 TXNRD1Q16881 649 aa21.2■□□□□ 0.98
CCDC144NL-202ENST00000539177 ZNF784Q8NCA9 323 aaPredicted RBP21.19■□□□□ 0.98
CCDC144NL-202ENST00000539177 BCL9O00512 1426 aa21.19■□□□□ 0.98
CCDC144NL-202ENST00000539177 CDCA7Q9BWT1 371 aaPredicted RBP21.18■□□□□ 0.98
CCDC144NL-202ENST00000539177 FHDC1Q9C0D6 1143 aaPredicted RBP21.18■□□□□ 0.98
CCDC144NL-202ENST00000539177 SLC15A2Q16348 729 aa21.17■□□□□ 0.98
CCDC144NL-202ENST00000539177 BTAF1O14981 1849 aa21.17■□□□□ 0.98
CCDC144NL-202ENST00000539177 NFAT5O94916 1531 aa21.16■□□□□ 0.98
CCDC144NL-202ENST00000539177 ARHGEF25Q86VW2 580 aa21.16■□□□□ 0.98
CCDC144NL-202ENST00000539177 LTN1O94822 1766 aa21.15■□□□□ 0.98
CCDC144NL-202ENST00000539177 PAPPAQ13219 1627 aa21.15■□□□□ 0.98
CCDC144NL-202ENST00000539177 TNS2Q63HR2 1409 aa21.15■□□□□ 0.98
CCDC144NL-202ENST00000539177 SYT17Q9BSW7 474 aa21.15■□□□□ 0.98
CCDC144NL-202ENST00000539177 CARD10Q9BWT7 1032 aa21.15■□□□□ 0.98
CCDC144NL-202ENST00000539177 TTC21BQ7Z4L5 1316 aa21.14■□□□□ 0.97
CCDC144NL-202ENST00000539177 EXOC5O00471 708 aa21.14■□□□□ 0.97
CCDC144NL-202ENST00000539177 MON2Q7Z3U7 1717 aa21.14■□□□□ 0.97
CCDC144NL-202ENST00000539177 KCNH5Q8NCM2 988 aa21.13■□□□□ 0.97
CCDC144NL-202ENST00000539177 ACSBG1Q96GR2 724 aa21.13■□□□□ 0.97
CCDC144NL-202ENST00000539177 MTFR1LQ9H019 292 aa21.13■□□□□ 0.97
CCDC144NL-202ENST00000539177 EVC2Q86UK5 1308 aa21.12■□□□□ 0.97
CCDC144NL-202ENST00000539177 ABCC6O95255 1503 aa21.12■□□□□ 0.97
CCDC144NL-202ENST00000539177 UTRNP46939 3433 aa21.11■□□□□ 0.97
CCDC144NL-202ENST00000539177 CCDC7Q96M83 1385 aa21.1■□□□□ 0.97
CCDC144NL-202ENST00000539177 SGIP1Q9BQI5 828 aa21.1■□□□□ 0.97
CCDC144NL-202ENST00000539177 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
CCDC144NL-202ENST00000539177 TUBGCP6Q96RT7 1819 aa21.08■□□□□ 0.97
CCDC144NL-202ENST00000539177 TTC21AQ8NDW8 1320 aa21.07■□□□□ 0.96
CCDC144NL-202ENST00000539177 ARXQ96QS3 562 aa21.07■□□□□ 0.96
CCDC144NL-202ENST00000539177 USP54Q70EL1 1684 aa21.06■□□□□ 0.96
CCDC144NL-202ENST00000539177 ZNF692Q9BU19 519 aaPredicted RBP21.06■□□□□ 0.96
CCDC144NL-202ENST00000539177 KTN1Q86UP2 1357 aaKnown RBP21.06■□□□□ 0.96
CCDC144NL-202ENST00000539177 QSER1Q2KHR3 1735 aa21.06■□□□□ 0.96
CCDC144NL-202ENST00000539177 ZNF827Q17R98 1081 aa21.04■□□□□ 0.96
CCDC144NL-202ENST00000539177 KLHL34Q8N239 644 aa21.04■□□□□ 0.96
CCDC144NL-202ENST00000539177 NLRP2Q9NX02 1062 aa21.04■□□□□ 0.96
CCDC144NL-202ENST00000539177 ERBB3P21860 1342 aa21.03■□□□□ 0.96
CCDC144NL-202ENST00000539177 C1QTNF8P60827 252 aa21.02■□□□□ 0.96
CCDC144NL-202ENST00000539177 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.02■□□□□ 0.96
CCDC144NL-202ENST00000539177 COL24A1Q17RW2 1714 aa21.01■□□□□ 0.95
CCDC144NL-202ENST00000539177 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
CCDC144NL-202ENST00000539177 DOT1LQ8TEK3 1739 aa21.01■□□□□ 0.95
CCDC144NL-202ENST00000539177 ROCK2O75116 1388 aaKnown RBP21■□□□□ 0.95
CCDC144NL-202ENST00000539177 MAP3K5Q99683 1374 aa21■□□□□ 0.95
CCDC144NL-202ENST00000539177 IL2RBP14784 551 aa21■□□□□ 0.95
CCDC144NL-202ENST00000539177 GPR162Q16538 588 aa21■□□□□ 0.95
CCDC144NL-202ENST00000539177 PELP1Q8IZL8 1130 aaKnown RBP20.99■□□□□ 0.95
CCDC144NL-202ENST00000539177 LRRC4BQ9NT99 713 aa20.99■□□□□ 0.95
CCDC144NL-202ENST00000539177 NME9Q86XW9 330 aa20.98■□□□□ 0.95
CCDC144NL-202ENST00000539177 FAM208AQ9UK61 1670 aaKnown RBP20.97■□□□□ 0.95
CCDC144NL-202ENST00000539177 RGPD2P0DJD1 1756 aa20.96■□□□□ 0.95
CCDC144NL-202ENST00000539177 ANKRD24Q8TF21 1146 aa20.96■□□□□ 0.95
CCDC144NL-202ENST00000539177 USP31Q70CQ4 1352 aa20.96■□□□□ 0.95
CCDC144NL-202ENST00000539177 LY75O60449 1722 aa20.95■□□□□ 0.94
CCDC144NL-202ENST00000539177 SHANK3Q9BYB0 1731 aa20.95■□□□□ 0.94
CCDC144NL-202ENST00000539177 CD163L1Q9NR16 1453 aa20.94■□□□□ 0.94
CCDC144NL-202ENST00000539177 KCNQ4P56696 695 aa20.93■□□□□ 0.94
CCDC144NL-202ENST00000539177 AKT1S1Q96B36 256 aa20.93■□□□□ 0.94
CCDC144NL-202ENST00000539177 GIGYF1O75420 1035 aaPredicted RBP20.92■□□□□ 0.94
CCDC144NL-202ENST00000539177 POLD1P28340 1107 aa20.92■□□□□ 0.94
CCDC144NL-202ENST00000539177 DDX54Q8TDD1 881 aaKnown RBP20.92■□□□□ 0.94
CCDC144NL-202ENST00000539177 SIN3AQ96ST3 1273 aa20.92■□□□□ 0.94
CCDC144NL-202ENST00000539177 PNPLA7Q6ZV29 1317 aa20.92■□□□□ 0.94
CCDC144NL-202ENST00000539177 SBNO2Q9Y2G9 1366 aa20.92■□□□□ 0.94
CCDC144NL-202ENST00000539177 TMC1Q8TDI8 760 aa20.91■□□□□ 0.94
CCDC144NL-202ENST00000539177 NLGN2Q8NFZ4 835 aa20.9■□□□□ 0.94
CCDC144NL-202ENST00000539177 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
CCDC144NL-202ENST00000539177 SLC16A10Q8TF71 515 aa20.89■□□□□ 0.93
CCDC144NL-202ENST00000539177 SYTL4Q96C24 671 aaPredicted RBP20.89■□□□□ 0.93
CCDC144NL-202ENST00000539177 LTV1Q96GA3 475 aaPredicted RBP20.89■□□□□ 0.93
CCDC144NL-202ENST00000539177 TFCP2L1Q9NZI6 479 aa20.89■□□□□ 0.93
CCDC144NL-202ENST00000539177 SLC27A3Q5K4L6 730 aa20.88■□□□□ 0.93
CCDC144NL-202ENST00000539177 EDC4Q6P2E9 1401 aaKnown RBP20.87■□□□□ 0.93
CCDC144NL-202ENST00000539177 HDGFL2Q7Z4V5 671 aaPredicted RBP20.86■□□□□ 0.93
CCDC144NL-202ENST00000539177 SLC12A5Q9H2X9 1139 aa20.85■□□□□ 0.93
CCDC144NL-202ENST00000539177 PRIM1P49642 420 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms