RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 CRYBG1Q9Y4K1 1723 aa27.61■■■□□ 2.01
COPS7A-208ENST00000538410 FAM83GA6ND36 823 aa27.6■■■□□ 2.01
COPS7A-208ENST00000538410 UPF1Q92900 1129 aaKnown RBP eCLIP27.6■■■□□ 2.01
COPS7A-208ENST00000538410 YTHDC1Q96MU7 727 aaKnown RBP27.6■■■□□ 2.01
COPS7A-208ENST00000538410 FBLN1P23142 703 aa27.59■■■□□ 2.01
COPS7A-208ENST00000538410 SMG6Q86US8 1419 aaKnown RBP27.58■■■□□ 2.01
COPS7A-208ENST00000538410 NUTM2GQ5VZR2 741 aa27.58■■■□□ 2.01
COPS7A-208ENST00000538410 POLKQ9UBT6 870 aa27.57■■■□□ 2
COPS7A-208ENST00000538410 CFAP53Q96M91 514 aa27.56■■■□□ 2
COPS7A-208ENST00000538410 COL14A1Q05707 1796 aaKnown RBP27.56■■■□□ 2
COPS7A-208ENST00000538410 GLI3P10071 1580 aa27.54■■■□□ 2
COPS7A-208ENST00000538410 VPS72Q15906 364 aa27.54■■■□□ 2
COPS7A-208ENST00000538410 PHRF1Q9P1Y6 1649 aaKnown RBP27.54■■■□□ 2
COPS7A-208ENST00000538410 COL3A1P02461 1466 aaPredicted RBP27.54■■■□□ 2
COPS7A-208ENST00000538410 LTN1O94822 1766 aa27.53■■■□□ 2
COPS7A-208ENST00000538410 SLIT3O75094 1523 aa27.53■■■□□ 2
COPS7A-208ENST00000538410 BTG4Q9NY30 223 aa27.52■■■□□ 2
COPS7A-208ENST00000538410 CCDC9Q9Y3X0 531 aaKnown RBP27.52■■■□□ 2
COPS7A-208ENST00000538410 EMILIN1Q9Y6C2 1016 aa27.52■■■□□ 2
COPS7A-208ENST00000538410 PEAK1Q9H792 1746 aa27.52■■■□□ 2
COPS7A-208ENST00000538410 RRS1Q15050 365 aaKnown RBP27.52■■■□□ 2
COPS7A-208ENST00000538410 INSRP06213 1382 aa27.52■■■□□ 2
COPS7A-208ENST00000538410 NRAPQ86VF7 1730 aa27.51■■□□□ 1.99
COPS7A-208ENST00000538410 PRDM11Q9NQV5 511 aa27.51■■□□□ 1.99
COPS7A-208ENST00000538410 NFAT5O94916 1531 aa27.5■■□□□ 1.99
COPS7A-208ENST00000538410 SOX12O15370 315 aa27.49■■□□□ 1.99
COPS7A-208ENST00000538410 WDR43Q15061 677 aaKnown RBP eCLIP27.49■■□□□ 1.99
COPS7A-208ENST00000538410 USP19O94966 1318 aa27.49■■□□□ 1.99
COPS7A-208ENST00000538410 PPM1GO15355 546 aaPredicted RBP27.48■■□□□ 1.99
COPS7A-208ENST00000538410 KIAA0232Q92628 1395 aa27.47■■□□□ 1.99
COPS7A-208ENST00000538410 KCNH5Q8NCM2 988 aa27.47■■□□□ 1.99
COPS7A-208ENST00000538410 ZC3H6P61129 1189 aaKnown RBP27.46■■□□□ 1.99
COPS7A-208ENST00000538410 MAP3K19Q56UN5 1328 aa27.45■■□□□ 1.99
COPS7A-208ENST00000538410 ADAMTS8Q9UP79 889 aa27.45■■□□□ 1.98
COPS7A-208ENST00000538410 DIAPH1O60610 1272 aaKnown RBP27.43■■□□□ 1.98
COPS7A-208ENST00000538410 CHRNA2Q15822 529 aa27.43■■□□□ 1.98
COPS7A-208ENST00000538410 BRWD3Q6RI45 1802 aa27.42■■□□□ 1.98
COPS7A-208ENST00000538410 GCP02774 474 aa27.42■■□□□ 1.98
COPS7A-208ENST00000538410 KIF24Q5T7B8 1368 aa27.42■■□□□ 1.98
COPS7A-208ENST00000538410 BLMP54132 1417 aaPredicted RBP27.42■■□□□ 1.98
COPS7A-208ENST00000538410 ONECUT3O60422 494 aaPredicted RBP27.41■■□□□ 1.98
COPS7A-208ENST00000538410 SEPT12Q8IYM1 358 aa27.41■■□□□ 1.98
COPS7A-208ENST00000538410 FLT4P35916 1363 aa27.41■■□□□ 1.98
COPS7A-208ENST00000538410 NUDCQ9Y266 331 aa27.41■■□□□ 1.98
COPS7A-208ENST00000538410 HNRNPUQ00839 825 aaKnown RBP eCLIP27.4■■□□□ 1.98
COPS7A-208ENST00000538410 AMPHP49418 695 aa27.38■■□□□ 1.97
COPS7A-208ENST00000538410 CPDO75976 1380 aa27.38■■□□□ 1.97
COPS7A-208ENST00000538410 RTL1A6NKG5 1358 aa27.37■■□□□ 1.97
COPS7A-208ENST00000538410 SPATA31A5Q5VU36 1347 aa27.37■■□□□ 1.97
COPS7A-208ENST00000538410 SPATA31A7Q8IWB4 1347 aa27.37■■□□□ 1.97
COPS7A-208ENST00000538410 A0A0G2JS52 829 aa27.36■■□□□ 1.97
COPS7A-208ENST00000538410 MYT1Q01538 1121 aa27.36■■□□□ 1.97
COPS7A-208ENST00000538410 FAM98CQ17RN3 349 aaKnown RBP27.36■■□□□ 1.97
COPS7A-208ENST00000538410 STRN4Q9NRL3 753 aa27.36■■□□□ 1.97
COPS7A-208ENST00000538410 IL13P35225 146 aa27.35■■□□□ 1.97
COPS7A-208ENST00000538410 HSP90AB2PQ58FF8 381 aa27.35■■□□□ 1.97
COPS7A-208ENST00000538410 U2SURPO15042 1029 aaKnown RBP27.34■■□□□ 1.97
COPS7A-208ENST00000538410 RGPD1P0DJD0 1748 aa27.34■■□□□ 1.97
COPS7A-208ENST00000538410 U2AF1L5P0DN76 240 aaPredicted RBP27.34■■□□□ 1.97
COPS7A-208ENST00000538410 HOXC9P31274 260 aa27.34■■□□□ 1.97
COPS7A-208ENST00000538410 EVA1CP58658 441 aa27.34■■□□□ 1.97
COPS7A-208ENST00000538410 U2AF1Q01081 240 aaKnown RBP eCLIP27.34■■□□□ 1.97
COPS7A-208ENST00000538410 ARHGEF25Q86VW2 580 aa27.34■■□□□ 1.97
COPS7A-208ENST00000538410 RGPD5Q99666 1765 aa27.33■■□□□ 1.97
COPS7A-208ENST00000538410 EIF4A2Q14240 407 aaKnown RBP27.32■■□□□ 1.96
COPS7A-208ENST00000538410 LMO7Q8WWI1 1683 aa27.32■■□□□ 1.96
COPS7A-208ENST00000538410 KRT27Q7Z3Y8 459 aa27.31■■□□□ 1.96
COPS7A-208ENST00000538410 CCDC125Q86Z20 511 aa27.31■■□□□ 1.96
COPS7A-208ENST00000538410 IP6K1Q92551 441 aa27.31■■□□□ 1.96
COPS7A-208ENST00000538410 CAMTA1Q9Y6Y1 1673 aa27.31■■□□□ 1.96
COPS7A-208ENST00000538410 COL18A1P39060 1754 aa27.31■■□□□ 1.96
COPS7A-208ENST00000538410 SPATA31A1Q5TZJ5 1347 aa27.3■■□□□ 1.96
COPS7A-208ENST00000538410 ZBTB7CA1YPR0 619 aa27.29■■□□□ 1.96
COPS7A-208ENST00000538410 CCDC146Q8IYE0 955 aa27.28■■□□□ 1.96
COPS7A-208ENST00000538410 EP400Q96L91 3159 aa27.27■■□□□ 1.96
COPS7A-208ENST00000538410 ZBED9Q6R2W3 1325 aa27.26■■□□□ 1.95
COPS7A-208ENST00000538410 ABCC6O95255 1503 aa27.26■■□□□ 1.95
COPS7A-208ENST00000538410 THSD7AQ9UPZ6 1657 aa27.25■■□□□ 1.95
COPS7A-208ENST00000538410 LARP1Q6PKG0 1096 aaKnown RBP27.25■■□□□ 1.95
COPS7A-208ENST00000538410 RUNDC1Q96C34 613 aa27.25■■□□□ 1.95
COPS7A-208ENST00000538410 USP35Q9P2H5 1018 aa27.25■■□□□ 1.95
COPS7A-208ENST00000538410 RGPD2P0DJD1 1756 aa27.24■■□□□ 1.95
COPS7A-208ENST00000538410 CENPBP07199 599 aaPredicted RBP27.24■■□□□ 1.95
COPS7A-208ENST00000538410 FCHSD2O94868 740 aa27.23■■□□□ 1.95
COPS7A-208ENST00000538410 SENP3-EIF4A1A0A087X0R7 540 aa27.23■■□□□ 1.95
COPS7A-208ENST00000538410 PNNQ9H307 717 aaKnown RBP27.23■■□□□ 1.95
COPS7A-208ENST00000538410 COL5A2P05997 1499 aaPredicted RBP27.22■■□□□ 1.95
COPS7A-208ENST00000538410 PLEKHF1Q96S99 279 aa27.21■■□□□ 1.95
COPS7A-208ENST00000538410 RSPH6AQ9H0K4 717 aa27.21■■□□□ 1.95
COPS7A-208ENST00000538410 HMOX1P09601 288 aa27.2■■□□□ 1.95
COPS7A-208ENST00000538410 BARGINQ6ZT62 677 aa27.2■■□□□ 1.95
COPS7A-208ENST00000538410 APAF1O14727 1248 aa27.19■■□□□ 1.94
COPS7A-208ENST00000538410 SF3B2Q13435 895 aaKnown RBP27.19■■□□□ 1.94
COPS7A-208ENST00000538410 TCP11L2Q8N4U5 519 aa27.19■■□□□ 1.94
COPS7A-208ENST00000538410 LTV1Q96GA3 475 aaPredicted RBP27.19■■□□□ 1.94
COPS7A-208ENST00000538410 AXIN2Q9Y2T1 843 aa27.19■■□□□ 1.94
COPS7A-208ENST00000538410 IGSF1Q8N6C5 1336 aa27.18■■□□□ 1.94
COPS7A-208ENST00000538410 FAM208AQ9UK61 1670 aaKnown RBP27.17■■□□□ 1.94
COPS7A-208ENST00000538410 EYA1Q99502 592 aa27.17■■□□□ 1.94
COPS7A-208ENST00000538410 THRAP3Q9Y2W1 955 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms