RNA–Protein interactions for RNA: ENST00000537882.2

NDRG1-229, Transcript of N-myc downstream regulated 1, human

TSL 2 BASIC

Gene NDRG1, Length 2,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDRG1-229	ENST00000537882	RNF214	Q8ND24	703 aa		13.89	□□□□□ -0.19
NDRG1-229	ENST00000537882	BCL2L12	Q9HB09	334 aa		13.89	□□□□□ -0.19
NDRG1-229	ENST00000537882	SBNO2	Q9Y2G9	1366 aa		13.89	□□□□□ -0.19
NDRG1-229	ENST00000537882	YEATS2	Q9ULM3	1422 aa		13.89	□□□□□ -0.19
NDRG1-229	ENST00000537882	TRPM2	O94759	1503 aa		13.88	□□□□□ -0.19
NDRG1-229	ENST00000537882	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.88	□□□□□ -0.19
NDRG1-229	ENST00000537882	SYCP2	Q9BX26	1530 aa		13.88	□□□□□ -0.19
NDRG1-229	ENST00000537882	PPIP5K1	Q6PFW1	1433 aa		13.88	□□□□□ -0.19
NDRG1-229	ENST00000537882	IL16	Q14005	1332 aa		13.87	□□□□□ -0.19
NDRG1-229	ENST00000537882	MTHFS	P49914	203 aa		13.87	□□□□□ -0.19
NDRG1-229	ENST00000537882	UVSSA	Q2YD98	709 aa		13.87	□□□□□ -0.19
NDRG1-229	ENST00000537882	PDCL2	Q8N4E4	241 aa		13.87	□□□□□ -0.19
NDRG1-229	ENST00000537882	PTPRT	O14522	1441 aa		13.86	□□□□□ -0.19
NDRG1-229	ENST00000537882	USP32	Q8NFA0	1604 aa		13.86	□□□□□ -0.19
NDRG1-229	ENST00000537882	FAM184A	Q8NB25	1140 aa		13.86	□□□□□ -0.19
NDRG1-229	ENST00000537882	ANKRD7	Q92527	254 aa		13.86	□□□□□ -0.19
NDRG1-229	ENST00000537882	USP26	Q9BXU7	913 aa		13.86	□□□□□ -0.19
NDRG1-229	ENST00000537882	CHMP4B	Q9H444	224 aa	Known RBP	13.86	□□□□□ -0.19
NDRG1-229	ENST00000537882	ERCC6	Q03468	1493 aa		13.86	□□□□□ -0.19
NDRG1-229	ENST00000537882	ZGPAT	Q8N5A5	531 aa	Known RBP	13.86	□□□□□ -0.19
NDRG1-229	ENST00000537882	SYAP1	Q96A49	352 aa	Predicted RBP	13.86	□□□□□ -0.19
NDRG1-229	ENST00000537882	ST18	O60284	1047 aa		13.85	□□□□□ -0.19
NDRG1-229	ENST00000537882	ALDH1L2	Q3SY69	923 aa		13.85	□□□□□ -0.19
NDRG1-229	ENST00000537882	FEZ1	Q99689	392 aa		13.85	□□□□□ -0.19
NDRG1-229	ENST00000537882	MYO3A	Q8NEV4	1616 aa		13.85	□□□□□ -0.19
NDRG1-229	ENST00000537882	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.84	□□□□□ -0.19
NDRG1-229	ENST00000537882	PPRC1	Q5VV67	1664 aa	Known RBP	13.84	□□□□□ -0.19
NDRG1-229	ENST00000537882	BRPF1	P55201	1214 aa	Predicted RBP	13.84	□□□□□ -0.19
NDRG1-229	ENST00000537882	ZBTB7B	O15156	539 aa	Predicted RBP	13.83	□□□□□ -0.19
NDRG1-229	ENST00000537882	PHF14	O94880	888 aa		13.83	□□□□□ -0.19
NDRG1-229	ENST00000537882	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.83	□□□□□ -0.19
NDRG1-229	ENST00000537882	GSPT1	P15170	499 aa	Known RBP	13.83	□□□□□ -0.19
NDRG1-229	ENST00000537882	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.83	□□□□□ -0.19
NDRG1-229	ENST00000537882	DIAPH3	Q9NSV4	1193 aa		13.83	□□□□□ -0.19
NDRG1-229	ENST00000537882	CD109	Q6YHK3	1445 aa		13.83	□□□□□ -0.2
NDRG1-229	ENST00000537882	TRIM35	Q9UPQ4	493 aa		13.83	□□□□□ -0.2
NDRG1-229	ENST00000537882	SPDYE4	A6NLX3	237 aa		13.83	□□□□□ -0.2
NDRG1-229	ENST00000537882	NEURL4	Q96JN8	1562 aa		13.83	□□□□□ -0.2
NDRG1-229	ENST00000537882	CTIF	O43310	598 aa	Known RBP	13.82	□□□□□ -0.2
NDRG1-229	ENST00000537882	IPO4	Q8TEX9	1081 aa	Known RBP	13.82	□□□□□ -0.2
NDRG1-229	ENST00000537882	PIK3R4	Q99570	1358 aa		13.82	□□□□□ -0.2
NDRG1-229	ENST00000537882	TMPO	P42166	694 aa	Known RBP	13.82	□□□□□ -0.2
NDRG1-229	ENST00000537882	FAM177B	A6PVY3	158 aa		13.81	□□□□□ -0.2
NDRG1-229	ENST00000537882	ZNF830	Q96NB3	372 aa	Predicted RBP	13.81	□□□□□ -0.2
NDRG1-229	ENST00000537882	PLEKHF1	Q96S99	279 aa		13.81	□□□□□ -0.2
NDRG1-229	ENST00000537882	U2AF2	P26368	475 aa	Known RBP eCLIP	13.81	□□□□□ -0.2	1e-6	■■■□□ 15.7
NDRG1-229	ENST00000537882	FBLN2	P98095	1184 aa		13.81	□□□□□ -0.2
NDRG1-229	ENST00000537882	GABPB1	Q06547	395 aa	Predicted RBP	13.81	□□□□□ -0.2
NDRG1-229	ENST00000537882	TTC12	Q9H892	705 aa	Predicted RBP	13.81	□□□□□ -0.2
NDRG1-229	ENST00000537882	OGFR	Q9NZT2	677 aa		13.81	□□□□□ -0.2
NDRG1-229	ENST00000537882	TRAPPC8	Q9Y2L5	1435 aa		13.81	□□□□□ -0.2
NDRG1-229	ENST00000537882	ZBTB7C	A1YPR0	619 aa		13.8	□□□□□ -0.2
NDRG1-229	ENST00000537882	BRD1	O95696	1058 aa		13.8	□□□□□ -0.2
NDRG1-229	ENST00000537882	INTS3	Q68E01	1043 aa	Known RBP	13.8	□□□□□ -0.2
NDRG1-229	ENST00000537882	ZNF428	Q96B54	188 aa		13.8	□□□□□ -0.2
NDRG1-229	ENST00000537882	CHAMP1	Q96JM3	812 aa		13.8	□□□□□ -0.2
NDRG1-229	ENST00000537882	MYOM2	P54296	1465 aa		13.8	□□□□□ -0.2
NDRG1-229	ENST00000537882	PLEKHM2	Q8IWE5	1019 aa		13.8	□□□□□ -0.2
NDRG1-229	ENST00000537882	ANKRD36B	Q8N2N9	1353 aa		13.8	□□□□□ -0.2
NDRG1-229	ENST00000537882	MAP3K4	Q9Y6R4	1608 aa		13.8	□□□□□ -0.2
NDRG1-229	ENST00000537882	SIRT2	Q8IXJ6	389 aa		13.8	□□□□□ -0.2
NDRG1-229	ENST00000537882	ABCA6	Q8N139	1617 aa		13.79	□□□□□ -0.2
NDRG1-229	ENST00000537882	UHRF1BP1L	A0JNW5	1464 aa		13.79	□□□□□ -0.2
NDRG1-229	ENST00000537882	CHAF1A	Q13111	956 aa	Predicted RBP	13.79	□□□□□ -0.2
NDRG1-229	ENST00000537882	CFAP70	Q5T0N1	1121 aa		13.79	□□□□□ -0.2
NDRG1-229	ENST00000537882	TTC22	Q5TAA0	569 aa		13.79	□□□□□ -0.2
NDRG1-229	ENST00000537882	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.79	□□□□□ -0.2
NDRG1-229	ENST00000537882	RIOK3	O14730	519 aa	Known RBP	13.79	□□□□□ -0.2
NDRG1-229	ENST00000537882	USP25	Q9UHP3	1055 aa		13.79	□□□□□ -0.2
NDRG1-229	ENST00000537882	NSD2	O96028	1365 aa		13.79	□□□□□ -0.2
NDRG1-229	ENST00000537882	ADCY5	O95622	1261 aa		13.78	□□□□□ -0.2
NDRG1-229	ENST00000537882	KIAA1524	Q8TCG1	905 aa		13.78	□□□□□ -0.2
NDRG1-229	ENST00000537882	ARHGAP45	Q92619	1136 aa		13.78	□□□□□ -0.2
NDRG1-229	ENST00000537882	JPH4	Q96JJ6	628 aa		13.78	□□□□□ -0.2
NDRG1-229	ENST00000537882	CGN	Q9P2M7	1197 aa	Known RBP	13.78	□□□□□ -0.2
NDRG1-229	ENST00000537882	INO80	Q9ULG1	1556 aa	Predicted RBP	13.78	□□□□□ -0.2
NDRG1-229	ENST00000537882	SYCP1	Q15431	976 aa		13.78	□□□□□ -0.2
NDRG1-229	ENST00000537882	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.78	□□□□□ -0.2
NDRG1-229	ENST00000537882	PTCH1	Q13635	1447 aa		13.77	□□□□□ -0.2
NDRG1-229	ENST00000537882	ARHGAP5	Q13017	1502 aa		13.77	□□□□□ -0.2
NDRG1-229	ENST00000537882	SLC12A5	Q9H2X9	1139 aa		13.77	□□□□□ -0.21
NDRG1-229	ENST00000537882	MRC2	Q9UBG0	1479 aa		13.77	□□□□□ -0.21
NDRG1-229	ENST00000537882	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
NDRG1-229	ENST00000537882	C1orf115	Q9H7X2	142 aa		13.77	□□□□□ -0.21
NDRG1-229	ENST00000537882	TPM3	P06753	285 aa		13.76	□□□□□ -0.21
NDRG1-229	ENST00000537882	MPND	Q8N594	471 aa		13.76	□□□□□ -0.21
NDRG1-229	ENST00000537882	IGSF3	O75054	1194 aa		13.75	□□□□□ -0.21
NDRG1-229	ENST00000537882	MCM2	P49736	904 aa		13.75	□□□□□ -0.21
NDRG1-229	ENST00000537882	CASC1	Q6TDU7	716 aa		13.75	□□□□□ -0.21
NDRG1-229	ENST00000537882	REC8	O95072	547 aa		13.75	□□□□□ -0.21
NDRG1-229	ENST00000537882	CUL4A	Q13619	759 aa		13.75	□□□□□ -0.21
NDRG1-229	ENST00000537882	KDM4A	O75164	1064 aa		13.74	□□□□□ -0.21
NDRG1-229	ENST00000537882	TMX3	Q96JJ7	454 aa		13.74	□□□□□ -0.21
NDRG1-229	ENST00000537882	CTNNA3	Q9UI47	895 aa		13.74	□□□□□ -0.21
NDRG1-229	ENST00000537882	SLFN14	P0C7P3	912 aa		13.74	□□□□□ -0.21
NDRG1-229	ENST00000537882	CCDC183	Q5T5S1	534 aa		13.74	□□□□□ -0.21
NDRG1-229	ENST00000537882	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.74	□□□□□ -0.21
NDRG1-229	ENST00000537882	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.74	□□□□□ -0.21
NDRG1-229	ENST00000537882	INTS4	Q96HW7	963 aa	Known RBP	13.74	□□□□□ -0.21
NDRG1-229	ENST00000537882	ABCC4	O15439	1325 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms