RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 WNK3Q9BYP7 1800 aa14.69□□□□□ -0.06
CPSF7-217ENST00000537162 AATKQ6ZMQ8 1374 aa14.69□□□□□ -0.06
CPSF7-217ENST00000537162 DDB1Q16531 1140 aa14.68□□□□□ -0.06
CPSF7-217ENST00000537162 TUBGCP6Q96RT7 1819 aa14.68□□□□□ -0.06
CPSF7-217ENST00000537162 COL5A2P05997 1499 aaPredicted RBP14.68□□□□□ -0.06
CPSF7-217ENST00000537162 POLD1P28340 1107 aa14.66□□□□□ -0.06
CPSF7-217ENST00000537162 SIRT1Q96EB6 747 aa14.66□□□□□ -0.06
CPSF7-217ENST00000537162 QSER1Q2KHR3 1735 aa14.66□□□□□ -0.06
CPSF7-217ENST00000537162 ARHGEF28Q8N1W1 1705 aaKnown RBP14.66□□□□□ -0.06
CPSF7-217ENST00000537162 BCL9O00512 1426 aa14.66□□□□□ -0.06
CPSF7-217ENST00000537162 PRAM1Q96QH2 718 aa14.65□□□□□ -0.06
CPSF7-217ENST00000537162 CRB1P82279 1406 aa14.65□□□□□ -0.06
CPSF7-217ENST00000537162 HIRIP3Q9BW71 556 aaPredicted RBP14.63□□□□□ -0.07
CPSF7-217ENST00000537162 LRRC4BQ9NT99 713 aa14.63□□□□□ -0.07
CPSF7-217ENST00000537162 NHSQ6T4R5 1651 aa14.62□□□□□ -0.07
CPSF7-217ENST00000537162 PIK3C2GO75747 1445 aa14.62□□□□□ -0.07
CPSF7-217ENST00000537162 TOMM70O94826 608 aa14.62□□□□□ -0.07
CPSF7-217ENST00000537162 NGDNQ8NEJ9 315 aaKnown RBP14.62□□□□□ -0.07
CPSF7-217ENST00000537162 PNPLA7Q6ZV29 1317 aa14.62□□□□□ -0.07
CPSF7-217ENST00000537162 CPDO75976 1380 aa14.61□□□□□ -0.07
CPSF7-217ENST00000537162 SLC16A10Q8TF71 515 aa14.61□□□□□ -0.07
CPSF7-217ENST00000537162 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
CPSF7-217ENST00000537162 TULP4Q9NRJ4 1543 aa14.61□□□□□ -0.07
CPSF7-217ENST00000537162 TNS2Q63HR2 1409 aa14.6□□□□□ -0.07
CPSF7-217ENST00000537162 BTAF1O14981 1849 aa14.59□□□□□ -0.07
CPSF7-217ENST00000537162 HSPA1AP0DMV8 641 aaKnown RBP14.58□□□□□ -0.08
CPSF7-217ENST00000537162 HSPA1BP0DMV9 641 aaKnown RBP14.58□□□□□ -0.08
CPSF7-217ENST00000537162 RGL3Q3MIN7 710 aa14.58□□□□□ -0.08
CPSF7-217ENST00000537162 ACSBG1Q96GR2 724 aa14.58□□□□□ -0.08
CPSF7-217ENST00000537162 ITGAEP38570 1179 aa14.56□□□□□ -0.08
CPSF7-217ENST00000537162 APLP2Q06481 763 aa14.56□□□□□ -0.08
CPSF7-217ENST00000537162 NMRK2Q9NPI5 230 aa14.56□□□□□ -0.08
CPSF7-217ENST00000537162 MINK1Q8N4C8 1332 aaPredicted RBP14.56□□□□□ -0.08
CPSF7-217ENST00000537162 FAM161AQ3B820 660 aa14.55□□□□□ -0.08
CPSF7-217ENST00000537162 KCNQ4P56696 695 aa14.54□□□□□ -0.08
CPSF7-217ENST00000537162 CFAP70Q5T0N1 1121 aa14.54□□□□□ -0.08
CPSF7-217ENST00000537162 POGKQ9P215 609 aa14.54□□□□□ -0.08
CPSF7-217ENST00000537162 USP19O94966 1318 aa14.54□□□□□ -0.08
CPSF7-217ENST00000537162 COL18A1P39060 1754 aa14.53□□□□□ -0.08
CPSF7-217ENST00000537162 SPATA31E1Q6ZUB1 1445 aa14.53□□□□□ -0.08
CPSF7-217ENST00000537162 ZBTB7CA1YPR0 619 aa14.53□□□□□ -0.08
CPSF7-217ENST00000537162 TOM1L2Q6ZVM7 507 aa14.53□□□□□ -0.08
CPSF7-217ENST00000537162 C14orf93Q9H972 538 aaKnown RBP14.53□□□□□ -0.08
CPSF7-217ENST00000537162 ITSN1Q15811 1721 aa14.52□□□□□ -0.08
CPSF7-217ENST00000537162 ANKRD30BQ9BXX2 1392 aa14.52□□□□□ -0.08
CPSF7-217ENST00000537162 MSL1Q68DK7 614 aa14.52□□□□□ -0.09
CPSF7-217ENST00000537162 WASLO00401 505 aaPredicted RBP14.51□□□□□ -0.09
CPSF7-217ENST00000537162 GCP02774 474 aa14.51□□□□□ -0.09
CPSF7-217ENST00000537162 RGPD5Q99666 1765 aa14.51□□□□□ -0.09
CPSF7-217ENST00000537162 RBM46Q8TBY0 533 aaKnown RBP14.5□□□□□ -0.09
CPSF7-217ENST00000537162 TFCP2L1Q9NZI6 479 aa14.5□□□□□ -0.09
CPSF7-217ENST00000537162 USP6P35125 1406 aa14.49□□□□□ -0.09
CPSF7-217ENST00000537162 BRD4O60885 1362 aaPredicted RBP14.49□□□□□ -0.09
CPSF7-217ENST00000537162 ABTB2Q8N961 1025 aa14.49□□□□□ -0.09
CPSF7-217ENST00000537162 AXIN2Q9Y2T1 843 aa14.49□□□□□ -0.09
CPSF7-217ENST00000537162 EIF3AQ14152 1382 aaKnown RBP14.48□□□□□ -0.09
CPSF7-217ENST00000537162 CICQ96RK0 1608 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-217ENST00000537162 LOC105371045A0A1W2PR82 267 aa14.48□□□□□ -0.09
CPSF7-217ENST00000537162 CD2APQ9Y5K6 639 aa14.48□□□□□ -0.09
CPSF7-217ENST00000537162 WDR17Q8IZU2 1322 aa14.47□□□□□ -0.09
CPSF7-217ENST00000537162 EXOC5O00471 708 aa14.47□□□□□ -0.09
CPSF7-217ENST00000537162 IGSF1Q8N6C5 1336 aa14.46□□□□□ -0.09
CPSF7-217ENST00000537162 COL23A1Q86Y22 540 aaPredicted RBP14.46□□□□□ -0.09
CPSF7-217ENST00000537162 NUDT16Q96DE0 195 aaKnown RBP14.46□□□□□ -0.09
CPSF7-217ENST00000537162 CDCA7Q9BWT1 371 aaPredicted RBP14.46□□□□□ -0.09
CPSF7-217ENST00000537162 ACEP12821 1306 aa14.45□□□□□ -0.1
CPSF7-217ENST00000537162 TRPM1Q7Z4N2 1603 aa14.45□□□□□ -0.1
CPSF7-217ENST00000537162 TRAK1Q9UPV9 953 aa14.45□□□□□ -0.1
CPSF7-217ENST00000537162 POLR3AO14802 1390 aaPredicted RBP14.45□□□□□ -0.1
CPSF7-217ENST00000537162 MSH5O43196 834 aa14.44□□□□□ -0.1
CPSF7-217ENST00000537162 FSTL1Q12841 308 aa14.44□□□□□ -0.1
CPSF7-217ENST00000537162 ADGRB1O14514 1584 aa14.43□□□□□ -0.1
CPSF7-217ENST00000537162 ABCC6O95255 1503 aa14.43□□□□□ -0.1
CPSF7-217ENST00000537162 KIAA1210Q9ULL0 1709 aa14.43□□□□□ -0.1
CPSF7-217ENST00000537162 PIK3C2AO00443 1686 aa14.42□□□□□ -0.1
CPSF7-217ENST00000537162 KAT6BQ8WYB5 2073 aa14.42□□□□□ -0.1
CPSF7-217ENST00000537162 SLC27A3Q5K4L6 730 aa14.42□□□□□ -0.1
CPSF7-217ENST00000537162 CARD10Q9BWT7 1032 aa14.42□□□□□ -0.1
CPSF7-217ENST00000537162 LY75O60449 1722 aa14.41□□□□□ -0.1
CPSF7-217ENST00000537162 NLRP13Q86W25 1043 aa14.41□□□□□ -0.1
CPSF7-217ENST00000537162 C16orf71Q8IYS4 520 aaPredicted RBP14.4□□□□□ -0.1
CPSF7-217ENST00000537162 SLC4A1APQ9BWU0 796 aaKnown RBP14.4□□□□□ -0.1
CPSF7-217ENST00000537162 SLIT3O75094 1523 aa14.4□□□□□ -0.1
CPSF7-217ENST00000537162 QRICH2Q9H0J4 1663 aa14.38□□□□□ -0.11
CPSF7-217ENST00000537162 PPIP5K1Q6PFW1 1433 aa14.38□□□□□ -0.11
CPSF7-217ENST00000537162 KCPQ6ZWJ8 1503 aa14.37□□□□□ -0.11
CPSF7-217ENST00000537162 KIAA1551Q9HCM1 1747 aa14.36□□□□□ -0.11
CPSF7-217ENST00000537162 FOXN1O15353 648 aa14.36□□□□□ -0.11
CPSF7-217ENST00000537162 CSB-PGBD3P0DP91 1061 aa14.36□□□□□ -0.11
CPSF7-217ENST00000537162 CPSF1Q10570 1443 aaKnown RBP14.35□□□□□ -0.11
CPSF7-217ENST00000537162 PLEKHG3A1L390 1219 aa14.35□□□□□ -0.11
CPSF7-217ENST00000537162 USP54Q70EL1 1684 aa14.35□□□□□ -0.11
CPSF7-217ENST00000537162 PKD1L3Q7Z443 1732 aa14.35□□□□□ -0.11
CPSF7-217ENST00000537162 TNRC18O15417 2968 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-217ENST00000537162 MLLT1Q03111 559 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-217ENST00000537162 CDK19Q9BWU1 502 aa14.34□□□□□ -0.11
CPSF7-217ENST00000537162 RRAGCQ9HB90 399 aa14.34□□□□□ -0.11
CPSF7-217ENST00000537162 N4BP2Q86UW6 1770 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-217ENST00000537162 SMIM5Q71RC9 77 aa14.33□□□□□ -0.12
CPSF7-217ENST00000537162 ABHD8Q96I13 439 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms