RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 CRB1P82279 1406 aa11.75□□□□□ -0.53
DDB1-208ENST00000537120 PUS7Q96PZ0 661 aaKnown RBP11.74□□□□□ -0.53
DDB1-208ENST00000537120 CDCA7Q9BWT1 371 aaPredicted RBP11.74□□□□□ -0.53
DDB1-208ENST00000537120 WDR17Q8IZU2 1322 aa11.74□□□□□ -0.53
DDB1-208ENST00000537120 SBNO2Q9Y2G9 1366 aa11.74□□□□□ -0.53
DDB1-208ENST00000537120 CPSF1Q10570 1443 aaKnown RBP11.74□□□□□ -0.53
DDB1-208ENST00000537120 EXOC5O00471 708 aa11.73□□□□□ -0.53
DDB1-208ENST00000537120 COL5A2P05997 1499 aaPredicted RBP11.73□□□□□ -0.53
DDB1-208ENST00000537120 TMF1P82094 1093 aa11.73□□□□□ -0.53
DDB1-208ENST00000537120 NBPF14Q5TI25 921 aa11.73□□□□□ -0.53
DDB1-208ENST00000537120 CARD10Q9BWT7 1032 aa11.73□□□□□ -0.53
DDB1-208ENST00000537120 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
DDB1-208ENST00000537120 R3HDM1Q15032 1099 aaKnown RBP11.72□□□□□ -0.53
DDB1-208ENST00000537120 THSD7AQ9UPZ6 1657 aa11.71□□□□□ -0.53
DDB1-208ENST00000537120 COG3Q96JB2 828 aa11.71□□□□□ -0.53
DDB1-208ENST00000537120 CAMKK2Q96RR4 588 aa11.71□□□□□ -0.53
DDB1-208ENST00000537120 PIK3C2AO00443 1686 aa11.71□□□□□ -0.54
DDB1-208ENST00000537120 SLIT3O75094 1523 aa11.7□□□□□ -0.54
DDB1-208ENST00000537120 AKAP12Q02952 1782 aa11.7□□□□□ -0.54
DDB1-208ENST00000537120 RGPD1P0DJD0 1748 aa11.7□□□□□ -0.54
DDB1-208ENST00000537120 CDCA8Q53HL2 280 aa11.7□□□□□ -0.54
DDB1-208ENST00000537120 LTV1Q96GA3 475 aaPredicted RBP11.7□□□□□ -0.54
DDB1-208ENST00000537120 TESK2Q96S53 571 aa11.7□□□□□ -0.54
DDB1-208ENST00000537120 LMO7Q8WWI1 1683 aa11.7□□□□□ -0.54
DDB1-208ENST00000537120 USP31Q70CQ4 1352 aa11.69□□□□□ -0.54
DDB1-208ENST00000537120 ANKRD24Q8TF21 1146 aa11.69□□□□□ -0.54
DDB1-208ENST00000537120 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
DDB1-208ENST00000537120 EDC4Q6P2E9 1401 aaKnown RBP11.69□□□□□ -0.54
DDB1-208ENST00000537120 AMPHP49418 695 aa11.68□□□□□ -0.54
DDB1-208ENST00000537120 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
DDB1-208ENST00000537120 CCER1Q8TC90 406 aaPredicted RBP11.68□□□□□ -0.54
DDB1-208ENST00000537120 POLR3GLQ9BT43 218 aa11.68□□□□□ -0.54
DDB1-208ENST00000537120 A0A1W2PP64 1363 aa11.67□□□□□ -0.54
DDB1-208ENST00000537120 USP47Q96K76 1375 aa11.67□□□□□ -0.54
DDB1-208ENST00000537120 CCDC7Q96M83 1385 aa11.67□□□□□ -0.54
DDB1-208ENST00000537120 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
DDB1-208ENST00000537120 BCL11BQ9C0K0 894 aaPredicted RBP11.67□□□□□ -0.54
DDB1-208ENST00000537120 OVOS2A0A0G2JMS6 1433 aa11.67□□□□□ -0.54
DDB1-208ENST00000537120 OVOS2A0A0J9YW53 1432 aa11.67□□□□□ -0.54
DDB1-208ENST00000537120 OVOS2Q6IE36 1432 aa11.67□□□□□ -0.54
DDB1-208ENST00000537120 RGPD5Q99666 1765 aa11.67□□□□□ -0.54
DDB1-208ENST00000537120 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
DDB1-208ENST00000537120 NINLQ9Y2I6 1382 aa11.67□□□□□ -0.54
DDB1-208ENST00000537120 IL2RBP14784 551 aa11.66□□□□□ -0.54
DDB1-208ENST00000537120 IP6K1Q92551 441 aa11.66□□□□□ -0.54
DDB1-208ENST00000537120 KAT6BQ8WYB5 2073 aa11.66□□□□□ -0.54
DDB1-208ENST00000537120 CD163L1Q9NR16 1453 aa11.65□□□□□ -0.54
DDB1-208ENST00000537120 COL18A1P39060 1754 aa11.65□□□□□ -0.54
DDB1-208ENST00000537120 DISP2A7MBM2 1401 aa11.65□□□□□ -0.54
DDB1-208ENST00000537120 MON2Q7Z3U7 1717 aa11.65□□□□□ -0.54
DDB1-208ENST00000537120 PLSCR1O15162 318 aa11.64□□□□□ -0.55
DDB1-208ENST00000537120 GGNBP2Q9H3C7 697 aa11.64□□□□□ -0.55
DDB1-208ENST00000537120 PARP4Q9UKK3 1724 aaKnown RBP11.63□□□□□ -0.55
DDB1-208ENST00000537120 ERBB3P21860 1342 aa11.63□□□□□ -0.55
DDB1-208ENST00000537120 CLSPNQ9HAW4 1339 aa11.63□□□□□ -0.55
DDB1-208ENST00000537120 FBLN1P23142 703 aa11.63□□□□□ -0.55
DDB1-208ENST00000537120 DDX54Q8TDD1 881 aaKnown RBP11.63□□□□□ -0.55
DDB1-208ENST00000537120 ACSBG1Q96GR2 724 aa11.63□□□□□ -0.55
DDB1-208ENST00000537120 NFAT5O94916 1531 aa11.63□□□□□ -0.55
DDB1-208ENST00000537120 FYB1O15117 783 aa11.62□□□□□ -0.55
DDB1-208ENST00000537120 PTF1AQ7RTS3 328 aa11.62□□□□□ -0.55
DDB1-208ENST00000537120 PPP1R1BQ9UD71 204 aaPredicted RBP11.62□□□□□ -0.55
DDB1-208ENST00000537120 TNS1Q9HBL0 1735 aaKnown RBP11.62□□□□□ -0.55
DDB1-208ENST00000537120 ANKRD36BQ8N2N9 1353 aa11.62□□□□□ -0.55
DDB1-208ENST00000537120 HOXC9P31274 260 aa11.61□□□□□ -0.55
DDB1-208ENST00000537120 RRS1Q15050 365 aaKnown RBP11.61□□□□□ -0.55
DDB1-208ENST00000537120 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
DDB1-208ENST00000537120 KCNQ2O43526 872 aa11.6□□□□□ -0.55
DDB1-208ENST00000537120 STK32BQ9NY57 414 aa11.6□□□□□ -0.55
DDB1-208ENST00000537120 LTN1O94822 1766 aa11.59□□□□□ -0.55
DDB1-208ENST00000537120 PPM1GO15355 546 aaPredicted RBP11.59□□□□□ -0.55
DDB1-208ENST00000537120 TXNRD1Q16881 649 aa11.59□□□□□ -0.55
DDB1-208ENST00000537120 SYTL4Q96C24 671 aaPredicted RBP11.59□□□□□ -0.55
DDB1-208ENST00000537120 SPON1Q9HCB6 807 aa11.59□□□□□ -0.55
DDB1-208ENST00000537120 ABCC6O95255 1503 aa11.59□□□□□ -0.55
DDB1-208ENST00000537120 LRRC37A3O60309 1634 aa11.58□□□□□ -0.56
DDB1-208ENST00000537120 DCAF8L1A6NGE4 600 aa11.58□□□□□ -0.56
DDB1-208ENST00000537120 EIF4G2P78344 907 aaKnown RBP eCLIP11.58□□□□□ -0.56
DDB1-208ENST00000537120 ZCRB1Q8TBF4 217 aaKnown RBP11.58□□□□□ -0.56
DDB1-208ENST00000537120 RAPGEF4Q8WZA2 1011 aa11.58□□□□□ -0.56
DDB1-208ENST00000537120 PROM2Q8N271 834 aa11.57□□□□□ -0.56
DDB1-208ENST00000537120 SBF2Q86WG5 1849 aa11.56□□□□□ -0.56
DDB1-208ENST00000537120 TATP17735 454 aaPredicted RBP11.56□□□□□ -0.56
DDB1-208ENST00000537120 NBPF6Q5VWK0 638 aa11.56□□□□□ -0.56
DDB1-208ENST00000537120 TNS2Q63HR2 1409 aa11.56□□□□□ -0.56
DDB1-208ENST00000537120 USHBP1Q8N6Y0 703 aa11.56□□□□□ -0.56
DDB1-208ENST00000537120 NBPF4Q96M43 638 aa11.56□□□□□ -0.56
DDB1-208ENST00000537120 CARD14Q9BXL6 1004 aa11.56□□□□□ -0.56
DDB1-208ENST00000537120 LRP5O75197 1615 aa11.56□□□□□ -0.56
DDB1-208ENST00000537120 BCL9O00512 1426 aa11.55□□□□□ -0.56
DDB1-208ENST00000537120 SMG6Q86US8 1419 aaKnown RBP11.55□□□□□ -0.56
DDB1-208ENST00000537120 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
DDB1-208ENST00000537120 PRIM1P49642 420 aaKnown RBP11.55□□□□□ -0.56
DDB1-208ENST00000537120 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
DDB1-208ENST00000537120 USP54Q70EL1 1684 aa11.55□□□□□ -0.56
DDB1-208ENST00000537120 CGNL1Q0VF96 1302 aa11.55□□□□□ -0.56
DDB1-208ENST00000537120 PEAK1Q9H792 1746 aa11.55□□□□□ -0.56
DDB1-208ENST00000537120 WNK3Q9BYP7 1800 aa11.54□□□□□ -0.56
DDB1-208ENST00000537120 ZBTB7AO95365 584 aa11.54□□□□□ -0.56
DDB1-208ENST00000537120 HSPA5P11021 654 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms