RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 NME9Q86XW9 330 aa12.02□□□□□ -0.49
SFSWAP-202ENST00000535202 PCGF6Q9BYE7 350 aa12.02□□□□□ -0.49
SFSWAP-202ENST00000535202 A0A1W2PP64 1363 aa12.02□□□□□ -0.49
SFSWAP-202ENST00000535202 EN1Q05925 392 aaPredicted RBP12.01□□□□□ -0.49
SFSWAP-202ENST00000535202 FAM196AQ6ZSG2 479 aa12.01□□□□□ -0.49
SFSWAP-202ENST00000535202 TESK2Q96S53 571 aa12.01□□□□□ -0.49
SFSWAP-202ENST00000535202 TERF2IPQ9NYB0 399 aa12.01□□□□□ -0.49
SFSWAP-202ENST00000535202 AXIN2Q9Y2T1 843 aa12.01□□□□□ -0.49
SFSWAP-202ENST00000535202 USP31Q70CQ4 1352 aa12.01□□□□□ -0.49
SFSWAP-202ENST00000535202 USP47Q96K76 1375 aa12.01□□□□□ -0.49
SFSWAP-202ENST00000535202 EDC4Q6P2E9 1401 aaKnown RBP12.01□□□□□ -0.49
SFSWAP-202ENST00000535202 LRRC37A3O60309 1634 aa12□□□□□ -0.49
SFSWAP-202ENST00000535202 LTN1O94822 1766 aa12□□□□□ -0.49
SFSWAP-202ENST00000535202 TRIM37O94972 964 aa12□□□□□ -0.49
SFSWAP-202ENST00000535202 CSB-PGBD3P0DP91 1061 aa12□□□□□ -0.49
SFSWAP-202ENST00000535202 PUS7Q96PZ0 661 aaKnown RBP12□□□□□ -0.49
SFSWAP-202ENST00000535202 WDR17Q8IZU2 1322 aa12□□□□□ -0.49
SFSWAP-202ENST00000535202 ABCC6O95255 1503 aa11.99□□□□□ -0.49
SFSWAP-202ENST00000535202 DISP2A7MBM2 1401 aa11.98□□□□□ -0.49
SFSWAP-202ENST00000535202 NINLQ9Y2I6 1382 aa11.98□□□□□ -0.49
SFSWAP-202ENST00000535202 SLC24A1O60721 1099 aa11.97□□□□□ -0.49
SFSWAP-202ENST00000535202 APBA3O96018 575 aa11.97□□□□□ -0.49
SFSWAP-202ENST00000535202 TMF1P82094 1093 aa11.97□□□□□ -0.49
SFSWAP-202ENST00000535202 EZH2Q15910 746 aaKnown RBP11.97□□□□□ -0.49
SFSWAP-202ENST00000535202 OVOS2A0A0J9YW53 1432 aa11.96□□□□□ -0.49
SFSWAP-202ENST00000535202 OVOS2Q6IE36 1432 aa11.96□□□□□ -0.49
SFSWAP-202ENST00000535202 PSDA5PKW4 1024 aaPredicted RBP11.96□□□□□ -0.49
SFSWAP-202ENST00000535202 DDB1Q16531 1140 aa11.96□□□□□ -0.49
SFSWAP-202ENST00000535202 CARD10Q9BWT7 1032 aa11.96□□□□□ -0.49
SFSWAP-202ENST00000535202 PEAK1Q9H792 1746 aa11.96□□□□□ -0.49
SFSWAP-202ENST00000535202 OVOS2A0A0G2JMS6 1433 aa11.95□□□□□ -0.5
SFSWAP-202ENST00000535202 ANKRD36BQ8N2N9 1353 aa11.95□□□□□ -0.5
SFSWAP-202ENST00000535202 CLSPNQ9HAW4 1339 aa11.95□□□□□ -0.5
SFSWAP-202ENST00000535202 SBF2Q86WG5 1849 aa11.95□□□□□ -0.5
SFSWAP-202ENST00000535202 CCDC7Q96M83 1385 aa11.94□□□□□ -0.5
SFSWAP-202ENST00000535202 CAMKK2Q96RR4 588 aa11.94□□□□□ -0.5
SFSWAP-202ENST00000535202 CDCA7Q9BWT1 371 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-202ENST00000535202 TIMELESSQ9UNS1 1208 aa11.94□□□□□ -0.5
SFSWAP-202ENST00000535202 RREB1Q92766 1687 aa11.94□□□□□ -0.5
SFSWAP-202ENST00000535202 ERBB3P21860 1342 aa11.93□□□□□ -0.5
SFSWAP-202ENST00000535202 COG3Q96JB2 828 aa11.93□□□□□ -0.5
SFSWAP-202ENST00000535202 NUP188Q5SRE5 1749 aa11.93□□□□□ -0.5
SFSWAP-202ENST00000535202 PARD3Q8TEW0 1356 aa11.92□□□□□ -0.5
SFSWAP-202ENST00000535202 C11orf95C9JLR9 678 aaPredicted RBP11.92□□□□□ -0.5
SFSWAP-202ENST00000535202 ANKRD24Q8TF21 1146 aa11.92□□□□□ -0.5
SFSWAP-202ENST00000535202 NLRP2Q9NX02 1062 aa11.92□□□□□ -0.5
SFSWAP-202ENST00000535202 MYOM1P52179 1685 aa11.91□□□□□ -0.5
SFSWAP-202ENST00000535202 KIF20BQ96Q89 1820 aa11.91□□□□□ -0.5
SFSWAP-202ENST00000535202 LRP5O75197 1615 aa11.91□□□□□ -0.5
SFSWAP-202ENST00000535202 R3HDM1Q15032 1099 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-202ENST00000535202 CDCA8Q53HL2 280 aa11.91□□□□□ -0.5
SFSWAP-202ENST00000535202 MARCH10Q8NA82 808 aaPredicted RBP11.91□□□□□ -0.5
SFSWAP-202ENST00000535202 TNS2Q63HR2 1409 aa11.91□□□□□ -0.5
SFSWAP-202ENST00000535202 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-202ENST00000535202 EXOC5O00471 708 aa11.9□□□□□ -0.5
SFSWAP-202ENST00000535202 CCER1Q8TC90 406 aaPredicted RBP11.9□□□□□ -0.5
SFSWAP-202ENST00000535202 LTV1Q96GA3 475 aaPredicted RBP11.9□□□□□ -0.5
SFSWAP-202ENST00000535202 RGPD3A6NKT7 1758 aaPredicted RBP11.9□□□□□ -0.51
SFSWAP-202ENST00000535202 RGPD4Q7Z3J3 1758 aa11.9□□□□□ -0.51
SFSWAP-202ENST00000535202 IL2RBP14784 551 aa11.89□□□□□ -0.51
SFSWAP-202ENST00000535202 FBLN1P23142 703 aa11.89□□□□□ -0.51
SFSWAP-202ENST00000535202 IP6K1Q92551 441 aa11.89□□□□□ -0.51
SFSWAP-202ENST00000535202 GGNBP2Q9H3C7 697 aa11.89□□□□□ -0.51
SFSWAP-202ENST00000535202 MAP3K19Q56UN5 1328 aa11.88□□□□□ -0.51
SFSWAP-202ENST00000535202 AMPHP49418 695 aa11.88□□□□□ -0.51
SFSWAP-202ENST00000535202 PTF1AQ7RTS3 328 aa11.88□□□□□ -0.51
SFSWAP-202ENST00000535202 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
SFSWAP-202ENST00000535202 RGPD2P0DJD1 1756 aa11.87□□□□□ -0.51
SFSWAP-202ENST00000535202 BCL9O00512 1426 aa11.87□□□□□ -0.51
SFSWAP-202ENST00000535202 FYB1O15117 783 aa11.87□□□□□ -0.51
SFSWAP-202ENST00000535202 HOXC9P31274 260 aa11.87□□□□□ -0.51
SFSWAP-202ENST00000535202 NBPF14Q5TI25 921 aa11.87□□□□□ -0.51
SFSWAP-202ENST00000535202 POLR3GLQ9BT43 218 aa11.87□□□□□ -0.51
SFSWAP-202ENST00000535202 NSD3Q9BZ95 1437 aa11.86□□□□□ -0.51
SFSWAP-202ENST00000535202 RRS1Q15050 365 aaKnown RBP11.86□□□□□ -0.51
SFSWAP-202ENST00000535202 NHSQ6T4R5 1651 aa11.86□□□□□ -0.51
SFSWAP-202ENST00000535202 RTL1A6NKG5 1358 aa11.85□□□□□ -0.51
SFSWAP-202ENST00000535202 PLSCR1O15162 318 aa11.85□□□□□ -0.51
SFSWAP-202ENST00000535202 ACSBG1Q96GR2 724 aa11.85□□□□□ -0.51
SFSWAP-202ENST00000535202 CARD14Q9BXL6 1004 aa11.84□□□□□ -0.51
SFSWAP-202ENST00000535202 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.51
SFSWAP-202ENST00000535202 KCNQ2O43526 872 aa11.83□□□□□ -0.52
SFSWAP-202ENST00000535202 EIF4G2P78344 907 aaKnown RBP eCLIP11.83□□□□□ -0.52
SFSWAP-202ENST00000535202 SMG6Q86US8 1419 aaKnown RBP11.83□□□□□ -0.52
SFSWAP-202ENST00000535202 BTAF1O14981 1849 aa11.82□□□□□ -0.52
SFSWAP-202ENST00000535202 HSPA5P11021 654 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-202ENST00000535202 DDX54Q8TDD1 881 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-202ENST00000535202 MEGF6O75095 1541 aa11.81□□□□□ -0.52
SFSWAP-202ENST00000535202 SHANK3Q9BYB0 1731 aa11.81□□□□□ -0.52
SFSWAP-202ENST00000535202 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
SFSWAP-202ENST00000535202 FLT4P35916 1363 aa11.8□□□□□ -0.52
SFSWAP-202ENST00000535202 TXNRD1Q16881 649 aa11.8□□□□□ -0.52
SFSWAP-202ENST00000535202 HSP90AB2PQ58FF8 381 aa11.8□□□□□ -0.52
SFSWAP-202ENST00000535202 PROM2Q8N271 834 aa11.8□□□□□ -0.52
SFSWAP-202ENST00000535202 USHBP1Q8N6Y0 703 aa11.8□□□□□ -0.52
SFSWAP-202ENST00000535202 CGNL1Q0VF96 1302 aa11.8□□□□□ -0.52
SFSWAP-202ENST00000535202 SRCAPQ6ZRS2 3230 aa11.8□□□□□ -0.52
SFSWAP-202ENST00000535202 DOT1LQ8TEK3 1739 aa11.8□□□□□ -0.52
SFSWAP-202ENST00000535202 ANKRD26Q9UPS8 1709 aa11.8□□□□□ -0.52
SFSWAP-202ENST00000535202 INSRP06213 1382 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms