RNA–Protein interactions for RNA: ENST00000535170.5

ZKSCAN1-205, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 8,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-205ENST00000535170 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.28
ZKSCAN1-205ENST00000535170 NLRP6P59044 892 aa13.27□□□□□ -0.29
ZKSCAN1-205ENST00000535170 IKQ13123 557 aaPredicted RBP13.27□□□□□ -0.29
ZKSCAN1-205ENST00000535170 PHAXQ9H814 394 aaKnown RBP13.27□□□□□ -0.29
ZKSCAN1-205ENST00000535170 CYP46A1Q9Y6A2 500 aa13.27□□□□□ -0.29
ZKSCAN1-205ENST00000535170 CTTNBP2Q8WZ74 1663 aa13.27□□□□□ -0.29
ZKSCAN1-205ENST00000535170 FEZ1Q99689 392 aa13.27□□□□□ -0.29
ZKSCAN1-205ENST00000535170 PYM1Q9BRP8 204 aaKnown RBP13.26□□□□□ -0.29
ZKSCAN1-205ENST00000535170 PTPN23Q9H3S7 1636 aa13.26□□□□□ -0.29
ZKSCAN1-205ENST00000535170 USP8P40818 1118 aa13.26□□□□□ -0.29
ZKSCAN1-205ENST00000535170 PPP6R1Q9UPN7 881 aa13.26□□□□□ -0.29
ZKSCAN1-205ENST00000535170 INCENPQ9NQS7 918 aa13.26□□□□□ -0.29
ZKSCAN1-205ENST00000535170 FGFR1OPO95684 399 aaKnown RBP13.26□□□□□ -0.29
ZKSCAN1-205ENST00000535170 CCDC196A0A1B0GTZ2 297 aa13.26□□□□□ -0.29
ZKSCAN1-205ENST00000535170 LRPPRCP42704 1394 aaKnown RBP13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 FBXW7Q969H0 707 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 NSD2O96028 1365 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 KRT85P78386 507 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 TNIP1Q15025 636 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 SLF2Q8IX21 1173 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 EIF2AK4Q9P2K8 1649 aaKnown RBP13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 KRT18P05783 430 aaKnown RBP13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 LEKR1Q6ZMV7 388 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 PPP4R3BQ5MIZ7 849 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 LRRCC1Q9C099 1032 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 TSPY26PQ9H489 355 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 TSHZ2Q9NRE2 1034 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 TTC39AQ5SRH9 613 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 PPFIBP1Q86W92 1011 aa13.25□□□□□ -0.29
ZKSCAN1-205ENST00000535170 MAGI1Q96QZ7 1491 aaPredicted RBP13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 SEPT7Q16181 437 aaKnown RBP13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 ZFYVE27Q5T4F4 411 aa13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 SOGA3Q5TF21 947 aa13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 AKNAQ7Z591 1439 aa13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 PRG4Q92954 1404 aaPredicted RBP13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 GBP2P32456 591 aaPredicted RBP13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 AKAP2Q9Y2D5 859 aa13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 SMTNL1A8MU46 457 aa13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 RAB11FIP3O75154 756 aa13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 CYB5RLQ6IPT4 315 aa13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 PDE4CQ08493 712 aa13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 PDCL2Q8N4E4 241 aa13.24□□□□□ -0.29
ZKSCAN1-205ENST00000535170 KIF20AO95235 890 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 TMEM132AQ24JP5 1023 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 NUTM2FA1L443 756 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 RAB34Q9BZG1 259 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 NUTM2DQ5VT03 806 aaPredicted RBP13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 CNNM1Q9NRU3 951 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 ELL2O00472 640 aaPredicted RBP13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 STK38Q15208 465 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 ZNF397Q8NF99 534 aaPredicted RBP13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 TRIM5Q9C035 493 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 ERBINQ96RT1 1412 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 RTEL1-TNFRSF6BF6WH68 1400 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 H0YHG0 523 aa13.23□□□□□ -0.29
ZKSCAN1-205ENST00000535170 CAVIN2O95810 425 aa13.22□□□□□ -0.29
ZKSCAN1-205ENST00000535170 MPHOSPH8Q99549 860 aa13.22□□□□□ -0.29
ZKSCAN1-205ENST00000535170 TAF3Q5VWG9 929 aa13.22□□□□□ -0.29
ZKSCAN1-205ENST00000535170 GBP3Q9H0R5 595 aa13.22□□□□□ -0.29
ZKSCAN1-205ENST00000535170 HSP90AB3PQ58FF7 597 aa13.22□□□□□ -0.29
ZKSCAN1-205ENST00000535170 ANKLE2Q86XL3 938 aa13.22□□□□□ -0.29
ZKSCAN1-205ENST00000535170 SURF6O75683 361 aaKnown RBP13.22□□□□□ -0.29
ZKSCAN1-205ENST00000535170 STARD3NLO95772 234 aa13.21□□□□□ -0.29
ZKSCAN1-205ENST00000535170 EHMT1Q9H9B1 1298 aa13.21□□□□□ -0.29
ZKSCAN1-205ENST00000535170 FCHSD2O94868 740 aa13.21□□□□□ -0.29
ZKSCAN1-205ENST00000535170 FOXD4L5Q5VV16 416 aaPredicted RBP13.21□□□□□ -0.29
ZKSCAN1-205ENST00000535170 EXOC6Q8TAG9 804 aa13.21□□□□□ -0.29
ZKSCAN1-205ENST00000535170 FOXD4L4Q8WXT5 416 aaPredicted RBP13.21□□□□□ -0.29
ZKSCAN1-205ENST00000535170 AMOTQ4VCS5 1084 aa13.21□□□□□ -0.3
ZKSCAN1-205ENST00000535170 VPS36Q86VN1 386 aa13.21□□□□□ -0.3
ZKSCAN1-205ENST00000535170 KIAA0586Q9BVV6 1533 aa13.2□□□□□ -0.3
ZKSCAN1-205ENST00000535170 JAKMIP3Q5VZ66 844 aa13.2□□□□□ -0.3
ZKSCAN1-205ENST00000535170 TMOD2Q9NZR1 351 aa13.2□□□□□ -0.3
ZKSCAN1-205ENST00000535170 RAD54L2Q9Y4B4 1467 aa13.2□□□□□ -0.3
ZKSCAN1-205ENST00000535170 IMMTQ16891 758 aaKnown RBP13.2□□□□□ -0.3
ZKSCAN1-205ENST00000535170 DDX12PQ92771 950 aa13.2□□□□□ -0.3
ZKSCAN1-205ENST00000535170 TRAF1Q13077 416 aa13.2□□□□□ -0.3
ZKSCAN1-205ENST00000535170 TWISTNBQ3B726 338 aaPredicted RBP13.2□□□□□ -0.3
ZKSCAN1-205ENST00000535170 HDGFL1Q5TGJ6 251 aa13.2□□□□□ -0.3
ZKSCAN1-205ENST00000535170 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
ZKSCAN1-205ENST00000535170 CABP4P57796 275 aa13.19□□□□□ -0.3
ZKSCAN1-205ENST00000535170 LNPKQ9C0E8 428 aa13.19□□□□□ -0.3
ZKSCAN1-205ENST00000535170 MTHFSP49914 203 aa13.19□□□□□ -0.3
ZKSCAN1-205ENST00000535170 KIAA0754O94854 1291 aa13.19□□□□□ -0.3
ZKSCAN1-205ENST00000535170 TXNDC2Q86VQ3 553 aa13.19□□□□□ -0.3
ZKSCAN1-205ENST00000535170 MAP9Q49MG5 647 aa13.19□□□□□ -0.3
ZKSCAN1-205ENST00000535170 PDILTQ8N807 584 aa13.19□□□□□ -0.3
ZKSCAN1-205ENST00000535170 PPP4R3AQ6IN85 833 aa13.18□□□□□ -0.3
ZKSCAN1-205ENST00000535170 RPAP2Q8IXW5 612 aaPredicted RBP13.18□□□□□ -0.3
ZKSCAN1-205ENST00000535170 PAF1Q8N7H5 531 aa13.18□□□□□ -0.3
ZKSCAN1-205ENST00000535170 CCDC181Q5TID7 509 aa13.18□□□□□ -0.3
ZKSCAN1-205ENST00000535170 CEP57L1Q8IYX8 460 aa13.18□□□□□ -0.3
ZKSCAN1-205ENST00000535170 UBAC1Q9BSL1 405 aa13.18□□□□□ -0.3
ZKSCAN1-205ENST00000535170 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
ZKSCAN1-205ENST00000535170 CTAGE5O15320 804 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms