RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 CARD11Q9BXL7 1154 aa12.69□□□□□ -0.38
CCDC90B-219ENST00000534753 RYDENQ9NUL5 291 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-219ENST00000534753 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
CCDC90B-219ENST00000534753 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
CCDC90B-219ENST00000534753 ATP7BP35670 1465 aa12.68□□□□□ -0.38
CCDC90B-219ENST00000534753 ARHGEF10O15013 1369 aa12.68□□□□□ -0.38
CCDC90B-219ENST00000534753 ACEP12821 1306 aa12.67□□□□□ -0.38
CCDC90B-219ENST00000534753 RBM6P78332 1123 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-219ENST00000534753 TRPC5Q9UL62 973 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-219ENST00000534753 ITSN1Q15811 1721 aa12.67□□□□□ -0.38
CCDC90B-219ENST00000534753 EVC2Q86UK5 1308 aa12.66□□□□□ -0.38
CCDC90B-219ENST00000534753 PPIP5K1Q6PFW1 1433 aa12.66□□□□□ -0.38
CCDC90B-219ENST00000534753 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-219ENST00000534753 EFCAB3Q8N7B9 438 aa12.66□□□□□ -0.38
CCDC90B-219ENST00000534753 CCDC9Q9Y3X0 531 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-219ENST00000534753 CABP1Q9NZU7 370 aa12.65□□□□□ -0.38
CCDC90B-219ENST00000534753 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-219ENST00000534753 NBR1Q14596 966 aa12.64□□□□□ -0.39
CCDC90B-219ENST00000534753 TRPM3Q9HCF6 1732 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-219ENST00000534753 PLEKHG3A1L390 1219 aa12.63□□□□□ -0.39
CCDC90B-219ENST00000534753 ZBTB7CA1YPR0 619 aa12.63□□□□□ -0.39
CCDC90B-219ENST00000534753 FAM83GA6ND36 823 aa12.63□□□□□ -0.39
CCDC90B-219ENST00000534753 UNC5CLQ8IV45 518 aa12.63□□□□□ -0.39
CCDC90B-219ENST00000534753 ABTB2Q8N961 1025 aa12.63□□□□□ -0.39
CCDC90B-219ENST00000534753 BCL9LQ86UU0 1499 aa12.62□□□□□ -0.39
CCDC90B-219ENST00000534753 PPP1R37O75864 691 aa12.62□□□□□ -0.39
CCDC90B-219ENST00000534753 CCER1Q8TC90 406 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-219ENST00000534753 RGS12O14924 1447 aa12.62□□□□□ -0.39
CCDC90B-219ENST00000534753 TOPAZ1Q8N9V7 1692 aa12.61□□□□□ -0.39
CCDC90B-219ENST00000534753 A0A0G2JS52 829 aa12.61□□□□□ -0.39
CCDC90B-219ENST00000534753 ZC3H6P61129 1189 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-219ENST00000534753 MYT1Q01538 1121 aa12.61□□□□□ -0.39
CCDC90B-219ENST00000534753 GJD4Q96KN9 370 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-219ENST00000534753 PRDM11Q9NQV5 511 aa12.61□□□□□ -0.39
CCDC90B-219ENST00000534753 ATRNO75882 1429 aa12.61□□□□□ -0.39
CCDC90B-219ENST00000534753 ALS2Q96Q42 1657 aa12.61□□□□□ -0.39
CCDC90B-219ENST00000534753 RALGAPBQ86X10 1494 aa12.6□□□□□ -0.39
CCDC90B-219ENST00000534753 ABCA3Q99758 1704 aa12.6□□□□□ -0.39
CCDC90B-219ENST00000534753 POLR3AO14802 1390 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-219ENST00000534753 CHRNA2Q15822 529 aa12.6□□□□□ -0.39
CCDC90B-219ENST00000534753 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
CCDC90B-219ENST00000534753 BTG4Q9NY30 223 aa12.6□□□□□ -0.39
CCDC90B-219ENST00000534753 TRPC6Q9Y210 931 aa12.6□□□□□ -0.39
CCDC90B-219ENST00000534753 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-219ENST00000534753 SLIT2O94813 1529 aa12.58□□□□□ -0.4
CCDC90B-219ENST00000534753 PLCH1Q4KWH8 1693 aa12.58□□□□□ -0.4
CCDC90B-219ENST00000534753 FBXO22Q8NEZ5 403 aa12.58□□□□□ -0.4
CCDC90B-219ENST00000534753 ST20-MTHFSA0A0A6YYL1 179 aa12.57□□□□□ -0.4
CCDC90B-219ENST00000534753 SOX12O15370 315 aa12.57□□□□□ -0.4
CCDC90B-219ENST00000534753 NLRP6P59044 892 aa12.57□□□□□ -0.4
CCDC90B-219ENST00000534753 NLRP13Q86W25 1043 aa12.57□□□□□ -0.4
CCDC90B-219ENST00000534753 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCDC90B-219ENST00000534753 STRN4Q9NRL3 753 aa12.57□□□□□ -0.4
CCDC90B-219ENST00000534753 KIAA0232Q92628 1395 aa12.56□□□□□ -0.4
CCDC90B-219ENST00000534753 VPS72Q15906 364 aa12.56□□□□□ -0.4
CCDC90B-219ENST00000534753 USP6P35125 1406 aa12.55□□□□□ -0.4
CCDC90B-219ENST00000534753 EVA1CP58658 441 aa12.55□□□□□ -0.4
CCDC90B-219ENST00000534753 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.55□□□□□ -0.43e-6■■■■□ 25.7
CCDC90B-219ENST00000534753 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
CCDC90B-219ENST00000534753 ATAD2Q6PL18 1390 aa12.55□□□□□ -0.4
CCDC90B-219ENST00000534753 KTN1Q86UP2 1357 aaKnown RBP12.55□□□□□ -0.4
CCDC90B-219ENST00000534753 COL14A1Q05707 1796 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-219ENST00000534753 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-219ENST00000534753 SEPT12Q8IYM1 358 aa12.54□□□□□ -0.4
CCDC90B-219ENST00000534753 USP35Q9P2H5 1018 aa12.54□□□□□ -0.4
CCDC90B-219ENST00000534753 PHRF1Q9P1Y6 1649 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-219ENST00000534753 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-219ENST00000534753 GLI3P10071 1580 aa12.53□□□□□ -0.4
CCDC90B-219ENST00000534753 GABBR2O75899 941 aa12.53□□□□□ -0.4
CCDC90B-219ENST00000534753 GCP02774 474 aa12.53□□□□□ -0.4
CCDC90B-219ENST00000534753 SLC12A5Q9H2X9 1139 aa12.53□□□□□ -0.4
CCDC90B-219ENST00000534753 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
CCDC90B-219ENST00000534753 CRYBG1Q9Y4K1 1723 aa12.53□□□□□ -0.4
CCDC90B-219ENST00000534753 NWD2Q9ULI1 1742 aa12.52□□□□□ -0.41
CCDC90B-219ENST00000534753 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
CCDC90B-219ENST00000534753 HDGFL2Q7Z4V5 671 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-219ENST00000534753 TMEM106CQ9BVX2 250 aa12.51□□□□□ -0.41
CCDC90B-219ENST00000534753 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
CCDC90B-219ENST00000534753 USP47Q96K76 1375 aa12.51□□□□□ -0.41
CCDC90B-219ENST00000534753 SBNO2Q9Y2G9 1366 aa12.51□□□□□ -0.41
CCDC90B-219ENST00000534753 TESK2Q96S53 571 aa12.5□□□□□ -0.41
CCDC90B-219ENST00000534753 TERF2IPQ9NYB0 399 aa12.5□□□□□ -0.41
CCDC90B-219ENST00000534753 TIMELESSQ9UNS1 1208 aa12.5□□□□□ -0.41
CCDC90B-219ENST00000534753 USP19O94966 1318 aa12.5□□□□□ -0.41
CCDC90B-219ENST00000534753 BRD4O60885 1362 aaPredicted RBP12.5□□□□□ -0.41
CCDC90B-219ENST00000534753 NRKQ7Z2Y5 1582 aa12.5□□□□□ -0.41
CCDC90B-219ENST00000534753 NRAPQ86VF7 1730 aa12.5□□□□□ -0.41
CCDC90B-219ENST00000534753 TMF1P82094 1093 aa12.49□□□□□ -0.41
CCDC90B-219ENST00000534753 NME9Q86XW9 330 aa12.49□□□□□ -0.41
CCDC90B-219ENST00000534753 MS4A4AQ96JQ5 239 aa12.49□□□□□ -0.41
CCDC90B-219ENST00000534753 POLR3GLQ9BT43 218 aa12.49□□□□□ -0.41
CCDC90B-219ENST00000534753 AKAP12Q02952 1782 aa12.48□□□□□ -0.41
CCDC90B-219ENST00000534753 PIK3C2AO00443 1686 aa12.48□□□□□ -0.41
CCDC90B-219ENST00000534753 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
CCDC90B-219ENST00000534753 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
CCDC90B-219ENST00000534753 TTC21AQ8NDW8 1320 aa12.48□□□□□ -0.41
CCDC90B-219ENST00000534753 FAM182BQ5T319 152 aa12.48□□□□□ -0.41
CCDC90B-219ENST00000534753 LARP1Q6PKG0 1096 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-219ENST00000534753 KRT27Q7Z3Y8 459 aa12.48□□□□□ -0.41
CCDC90B-219ENST00000534753 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms