RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 PTF1AQ7RTS3 328 aa30.57■■■□□ 2.48
SSH3-211ENST00000534112 MARCH10Q8NA82 808 aaPredicted RBP30.57■■■□□ 2.48
SSH3-211ENST00000534112 PIK3C2AO00443 1686 aa30.57■■■□□ 2.48
SSH3-211ENST00000534112 CPSF1Q10570 1443 aaKnown RBP30.56■■■□□ 2.48
SSH3-211ENST00000534112 PEAK1Q9H792 1746 aa30.56■■■□□ 2.48
SSH3-211ENST00000534112 SOX12O15370 315 aa30.56■■■□□ 2.48
SSH3-211ENST00000534112 ROCK2O75116 1388 aaKnown RBP30.55■■■□□ 2.48
SSH3-211ENST00000534112 CARD10Q9BWT7 1032 aa30.55■■■□□ 2.48
SSH3-211ENST00000534112 PPP1R1BQ9UD71 204 aaPredicted RBP30.55■■■□□ 2.48
SSH3-211ENST00000534112 COL18A1P39060 1754 aa30.55■■■□□ 2.48
SSH3-211ENST00000534112 TTC21AQ8NDW8 1320 aa30.54■■■□□ 2.48
SSH3-211ENST00000534112 CSB-PGBD3P0DP91 1061 aa30.54■■■□□ 2.48
SSH3-211ENST00000534112 NEUROD1Q13562 356 aa30.53■■■□□ 2.48
SSH3-211ENST00000534112 LRRC37A3O60309 1634 aa30.53■■■□□ 2.48
SSH3-211ENST00000534112 PROM2Q8N271 834 aa30.51■■■□□ 2.47
SSH3-211ENST00000534112 ANO8Q9HCE9 1232 aaPredicted RBP30.51■■■□□ 2.47
SSH3-211ENST00000534112 BCL9O00512 1426 aa30.5■■■□□ 2.47
SSH3-211ENST00000534112 TRPM1Q7Z4N2 1603 aa30.5■■■□□ 2.47
SSH3-211ENST00000534112 KTN1Q86UP2 1357 aaKnown RBP30.48■■■□□ 2.47
SSH3-211ENST00000534112 EXOC5O00471 708 aa30.47■■■□□ 2.47
SSH3-211ENST00000534112 YY1P25490 414 aa30.45■■■□□ 2.47
SSH3-211ENST00000534112 SBF2Q86WG5 1849 aa30.44■■■□□ 2.46
SSH3-211ENST00000534112 NINLQ9Y2I6 1382 aa30.43■■■□□ 2.46
SSH3-211ENST00000534112 PDGFDQ9GZP0 370 aaPredicted RBP30.43■■■□□ 2.46
SSH3-211ENST00000534112 RGPD3A6NKT7 1758 aaPredicted RBP30.43■■■□□ 2.46
SSH3-211ENST00000534112 RGPD4Q7Z3J3 1758 aa30.43■■■□□ 2.46
SSH3-211ENST00000534112 NFAT5O94916 1531 aa30.42■■■□□ 2.46
SSH3-211ENST00000534112 CCDC7Q96M83 1385 aa30.42■■■□□ 2.46
SSH3-211ENST00000534112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.42■■■□□ 2.46
SSH3-211ENST00000534112 DCAF8L1A6NGE4 600 aa30.4■■■□□ 2.46
SSH3-211ENST00000534112 TXNRD1Q16881 649 aa30.4■■■□□ 2.46
SSH3-211ENST00000534112 AKAP12Q02952 1782 aa30.4■■■□□ 2.46
SSH3-211ENST00000534112 USP31Q70CQ4 1352 aa30.38■■■□□ 2.45
SSH3-211ENST00000534112 ZBTB7AO95365 584 aa30.37■■■□□ 2.45
SSH3-211ENST00000534112 SBNO2Q9Y2G9 1366 aa30.37■■■□□ 2.45
SSH3-211ENST00000534112 RGPD5Q99666 1765 aa30.36■■■□□ 2.45
SSH3-211ENST00000534112 WNK3Q9BYP7 1800 aa30.36■■■□□ 2.45
SSH3-211ENST00000534112 NME9Q86XW9 330 aa30.36■■■□□ 2.45
SSH3-211ENST00000534112 STK32BQ9NY57 414 aa30.36■■■□□ 2.45
SSH3-211ENST00000534112 NLRP2Q9NX02 1062 aa30.35■■■□□ 2.45
SSH3-211ENST00000534112 ABCC6O95255 1503 aa30.35■■■□□ 2.45
SSH3-211ENST00000534112 TNS2Q63HR2 1409 aa30.34■■■□□ 2.45
SSH3-211ENST00000534112 ERBB3P21860 1342 aa30.34■■■□□ 2.45
SSH3-211ENST00000534112 SLC15A2Q16348 729 aa30.34■■■□□ 2.45
SSH3-211ENST00000534112 TMC1Q8TDI8 760 aa30.34■■■□□ 2.45
SSH3-211ENST00000534112 CARD11Q9BXL7 1154 aa30.34■■■□□ 2.45
SSH3-211ENST00000534112 PTGER2P43116 358 aa30.33■■■□□ 2.45
SSH3-211ENST00000534112 SLC12A5Q9H2X9 1139 aa30.32■■■□□ 2.44
SSH3-211ENST00000534112 ATF5Q9Y2D1 282 aaPredicted RBP30.32■■■□□ 2.44
SSH3-211ENST00000534112 CASZ1Q86V15 1759 aa30.31■■■□□ 2.44
SSH3-211ENST00000534112 HDGFL2Q7Z4V5 671 aaPredicted RBP30.31■■■□□ 2.44
SSH3-211ENST00000534112 CD163L1Q9NR16 1453 aa30.31■■■□□ 2.44
SSH3-211ENST00000534112 ACSBG1Q96GR2 724 aa30.3■■■□□ 2.44
SSH3-211ENST00000534112 IL2RBP14784 551 aa30.29■■■□□ 2.44
SSH3-211ENST00000534112 ANKRD24Q8TF21 1146 aa30.28■■■□□ 2.44
SSH3-211ENST00000534112 MON2Q7Z3U7 1717 aa30.27■■■□□ 2.44
SSH3-211ENST00000534112 MTFR1LQ9H019 292 aa30.24■■■□□ 2.43
SSH3-211ENST00000534112 TERF2IPQ9NYB0 399 aa30.24■■■□□ 2.43
SSH3-211ENST00000534112 EDC4Q6P2E9 1401 aaKnown RBP30.23■■■□□ 2.43
SSH3-211ENST00000534112 PUS7Q96PZ0 661 aaKnown RBP30.21■■■□□ 2.43
SSH3-211ENST00000534112 UTRNP46939 3433 aa30.21■■■□□ 2.43
SSH3-211ENST00000534112 SGIP1Q9BQI5 828 aa30.2■■■□□ 2.43
SSH3-211ENST00000534112 FHDC1Q9C0D6 1143 aaPredicted RBP30.2■■■□□ 2.43
SSH3-211ENST00000534112 USP54Q70EL1 1684 aa30.2■■■□□ 2.42
SSH3-211ENST00000534112 A0A1W2PP64 1363 aa30.19■■■□□ 2.42
SSH3-211ENST00000534112 SYT17Q9BSW7 474 aa30.19■■■□□ 2.42
SSH3-211ENST00000534112 NHSQ6T4R5 1651 aa30.18■■■□□ 2.42
SSH3-211ENST00000534112 IP6K1Q92551 441 aa30.18■■■□□ 2.42
SSH3-211ENST00000534112 MYOM1P52179 1685 aa30.17■■■□□ 2.42
SSH3-211ENST00000534112 LRRC4BQ9NT99 713 aa30.15■■■□□ 2.42
SSH3-211ENST00000534112 DDX54Q8TDD1 881 aaKnown RBP30.14■■■□□ 2.42
SSH3-211ENST00000534112 LTV1Q96GA3 475 aaPredicted RBP30.14■■■□□ 2.42
SSH3-211ENST00000534112 LTN1O94822 1766 aa30.13■■■□□ 2.41
SSH3-211ENST00000534112 ZNF827Q17R98 1081 aa30.13■■■□□ 2.41
SSH3-211ENST00000534112 TONSLQ96HA7 1378 aa30.13■■■□□ 2.41
SSH3-211ENST00000534112 ARXQ96QS3 562 aa30.12■■■□□ 2.41
SSH3-211ENST00000534112 TESK2Q96S53 571 aa30.1■■■□□ 2.41
SSH3-211ENST00000534112 PAPPAQ13219 1627 aa30.08■■■□□ 2.41
SSH3-211ENST00000534112 COG3Q96JB2 828 aa30.08■■■□□ 2.41
SSH3-211ENST00000534112 MAP3K19Q56UN5 1328 aa30.07■■■□□ 2.4
SSH3-211ENST00000534112 ST20-MTHFSA0A0A6YYL1 179 aa30.07■■■□□ 2.4
SSH3-211ENST00000534112 SLC27A3Q5K4L6 730 aa30.07■■■□□ 2.4
SSH3-211ENST00000534112 AKT1S1Q96B36 256 aa30.07■■■□□ 2.4
SSH3-211ENST00000534112 BTAF1O14981 1849 aa30.06■■■□□ 2.4
SSH3-211ENST00000534112 FBLN1P23142 703 aa30.06■■■□□ 2.4
SSH3-211ENST00000534112 KAT6BQ8WYB5 2073 aa30.05■■■□□ 2.4
SSH3-211ENST00000534112 HOXC9P31274 260 aa30.05■■■□□ 2.4
SSH3-211ENST00000534112 ZNF784Q8NCA9 323 aaPredicted RBP30.05■■■□□ 2.4
SSH3-211ENST00000534112 AMPHP49418 695 aa30.04■■■□□ 2.4
SSH3-211ENST00000534112 PRIM1P49642 420 aaKnown RBP30.03■■■□□ 2.4
SSH3-211ENST00000534112 SYTL4Q96C24 671 aaPredicted RBP30.03■■■□□ 2.4
SSH3-211ENST00000534112 SLC24A1O60721 1099 aa30.02■■■□□ 2.4
SSH3-211ENST00000534112 MAP3K5Q99683 1374 aa30.02■■■□□ 2.4
SSH3-211ENST00000534112 SLC16A10Q8TF71 515 aa30.01■■■□□ 2.39
SSH3-211ENST00000534112 ZCRB1Q8TBF4 217 aaKnown RBP30■■■□□ 2.39
SSH3-211ENST00000534112 KCNQ4P56696 695 aa29.99■■■□□ 2.39
SSH3-211ENST00000534112 ANKRD36BQ8N2N9 1353 aa29.99■■■□□ 2.39
SSH3-211ENST00000534112 TFCP2L1Q9NZI6 479 aa29.98■■■□□ 2.39
SSH3-211ENST00000534112 PNPLA7Q6ZV29 1317 aa29.97■■■□□ 2.39
SSH3-211ENST00000534112 POLD1P28340 1107 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms