RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 SOX12O15370 315 aa36.65■■■■□ 3.46
SAMD1-202ENST00000533683 HSP90AB2PQ58FF8 381 aa36.64■■■■□ 3.46
SAMD1-202ENST00000533683 PIK3C2AO00443 1686 aa36.63■■■■□ 3.46
SAMD1-202ENST00000533683 CLUAP1Q96AJ1 413 aa36.63■■■■□ 3.45
SAMD1-202ENST00000533683 THUMPD2Q9BTF0 503 aaKnown RBP36.62■■■■□ 3.45
SAMD1-202ENST00000533683 DLG5Q8TDM6 1919 aa36.62■■■■□ 3.45
SAMD1-202ENST00000533683 SMC4Q9NTJ3 1288 aa36.61■■■■□ 3.45
SAMD1-202ENST00000533683 SSH1Q8WYL5 1049 aa36.61■■■■□ 3.45
SAMD1-202ENST00000533683 MAP3K19Q56UN5 1328 aa36.6■■■■□ 3.45
SAMD1-202ENST00000533683 AEBP1Q8IUX7 1158 aa36.6■■■■□ 3.45
SAMD1-202ENST00000533683 CALD1Q05682 793 aaKnown RBP36.6■■■■□ 3.45
SAMD1-202ENST00000533683 SULT6B1Q6IMI4 303 aa36.6■■■■□ 3.45
SAMD1-202ENST00000533683 ZKSCAN2Q63HK3 967 aa36.59■■■■□ 3.45
SAMD1-202ENST00000533683 RBM33Q96EV2 1170 aaKnown RBP36.59■■■■□ 3.45
SAMD1-202ENST00000533683 NPHP4O75161 1426 aaPredicted RBP36.58■■■■□ 3.45
SAMD1-202ENST00000533683 LAS1LQ9Y4W2 734 aaKnown RBP36.58■■■■□ 3.45
SAMD1-202ENST00000533683 LMOD3Q0VAK6 560 aa36.56■■■■□ 3.44
SAMD1-202ENST00000533683 RGPD1P0DJD0 1748 aa36.56■■■■□ 3.44
SAMD1-202ENST00000533683 AAMPQ13685 434 aa36.56■■■■□ 3.44
SAMD1-202ENST00000533683 MSH5O43196 834 aa36.54■■■■□ 3.44
SAMD1-202ENST00000533683 IGHDP01880 384 aa36.54■■■■□ 3.44
SAMD1-202ENST00000533683 NLRP6P59044 892 aa36.54■■■■□ 3.44
SAMD1-202ENST00000533683 IFT57Q9NWB7 429 aa36.54■■■■□ 3.44
SAMD1-202ENST00000533683 SBNO1A3KN83 1393 aa36.54■■■■□ 3.44
SAMD1-202ENST00000533683 PDE4AP27815 886 aa36.54■■■■□ 3.44
SAMD1-202ENST00000533683 GNAI1P63096 354 aa36.53■■■■□ 3.44
SAMD1-202ENST00000533683 ZNF853P0CG23 659 aa36.53■■■■□ 3.44
SAMD1-202ENST00000533683 FLT4P35916 1363 aa36.52■■■■□ 3.44
SAMD1-202ENST00000533683 DZIP1LQ8IYY4 767 aaKnown RBP36.52■■■■□ 3.44
SAMD1-202ENST00000533683 PHF8Q9UPP1 1060 aa36.51■■■■□ 3.44
SAMD1-202ENST00000533683 ADGRL3Q9HAR2 1447 aa36.51■■■■□ 3.44
SAMD1-202ENST00000533683 BACH2Q9BYV9 841 aa36.5■■■■□ 3.43
SAMD1-202ENST00000533683 FAM83GA6ND36 823 aa36.5■■■■□ 3.43
SAMD1-202ENST00000533683 MVPQ14764 893 aaKnown RBP36.5■■■■□ 3.43
SAMD1-202ENST00000533683 MARF1Q9Y4F3 1742 aaKnown RBP36.5■■■■□ 3.43
SAMD1-202ENST00000533683 TRIM27P14373 513 aa36.49■■■■□ 3.43
SAMD1-202ENST00000533683 FTSJ3Q8IY81 847 aaKnown RBP36.49■■■■□ 3.43
SAMD1-202ENST00000533683 ALDH1L2Q3SY69 923 aa36.49■■■■□ 3.43
SAMD1-202ENST00000533683 NUTM2GQ5VZR2 741 aa36.47■■■■□ 3.43
SAMD1-202ENST00000533683 MBIPQ9NS73 344 aa36.47■■■■□ 3.43
SAMD1-202ENST00000533683 NOB1Q9ULX3 412 aaKnown RBP36.47■■■■□ 3.43
SAMD1-202ENST00000533683 AMPHP49418 695 aa36.47■■■■□ 3.43
SAMD1-202ENST00000533683 CFAP44Q96MT7 982 aa36.47■■■■□ 3.43
SAMD1-202ENST00000533683 USP54Q70EL1 1684 aa36.46■■■■□ 3.43
SAMD1-202ENST00000533683 ARHGEF10O15013 1369 aa36.46■■■■□ 3.43
SAMD1-202ENST00000533683 ATF7IPQ6VMQ6 1270 aa36.46■■■■□ 3.43
SAMD1-202ENST00000533683 ABTB2Q8N961 1025 aa36.46■■■■□ 3.43
SAMD1-202ENST00000533683 PAK3O75914 559 aaPredicted RBP36.46■■■■□ 3.43
SAMD1-202ENST00000533683 ZNF428Q96B54 188 aa36.46■■■■□ 3.43
SAMD1-202ENST00000533683 DCTN1Q14203 1278 aa36.45■■■■□ 3.43
SAMD1-202ENST00000533683 PCDHB15Q9Y5E8 787 aa36.44■■■■□ 3.42
SAMD1-202ENST00000533683 KIF16BQ96L93 1317 aa36.43■■■■□ 3.42
SAMD1-202ENST00000533683 VAMP4O75379 141 aa36.43■■■■□ 3.42
SAMD1-202ENST00000533683 TSPYL6Q8N831 410 aa36.42■■■■□ 3.42
SAMD1-202ENST00000533683 IPO8O15397 1037 aaKnown RBP36.39■■■■□ 3.42
SAMD1-202ENST00000533683 BRPF1P55201 1214 aaPredicted RBP36.39■■■■□ 3.42
SAMD1-202ENST00000533683 ESCO1Q5FWF5 840 aa36.39■■■■□ 3.42
SAMD1-202ENST00000533683 KDRP35968 1356 aa36.38■■■■□ 3.41
SAMD1-202ENST00000533683 KIF24Q5T7B8 1368 aa36.38■■■■□ 3.41
SAMD1-202ENST00000533683 C14orf37Q86TY3 774 aa36.37■■■■□ 3.41
SAMD1-202ENST00000533683 EYA1Q99502 592 aa36.37■■■■□ 3.41
SAMD1-202ENST00000533683 IGSF1Q8N6C5 1336 aa36.37■■■■□ 3.41
SAMD1-202ENST00000533683 NWD1Q149M9 1564 aa36.36■■■■□ 3.41
SAMD1-202ENST00000533683 HOXC9P31274 260 aa36.36■■■■□ 3.41
SAMD1-202ENST00000533683 RGS3P49796 1198 aa36.36■■■■□ 3.41
SAMD1-202ENST00000533683 ELL2O00472 640 aaPredicted RBP36.34■■■■□ 3.41
SAMD1-202ENST00000533683 ANP32AP39687 249 aaKnown RBP36.34■■■■□ 3.41
SAMD1-202ENST00000533683 ITPRIPQ8IWB1 547 aa36.33■■■■□ 3.41
SAMD1-202ENST00000533683 C8orf58Q8NAV2 365 aa36.33■■■■□ 3.41
SAMD1-202ENST00000533683 DDX19BQ9UMR2 479 aa36.33■■■■□ 3.41
SAMD1-202ENST00000533683 TWISTNBQ3B726 338 aaPredicted RBP36.33■■■■□ 3.41
SAMD1-202ENST00000533683 PSME1Q06323 249 aa36.32■■■■□ 3.4
SAMD1-202ENST00000533683 MCM10Q7L590 875 aa36.32■■■■□ 3.4
SAMD1-202ENST00000533683 TMEM57Q8N5G2 664 aa36.32■■■■□ 3.4
SAMD1-202ENST00000533683 MRPL50Q8N5N7 158 aaKnown RBP36.32■■■■□ 3.4
SAMD1-202ENST00000533683 MTHFSDQ2M296 383 aaKnown RBP36.29■■■■□ 3.4
SAMD1-202ENST00000533683 RWDD1Q9H446 243 aaPredicted RBP36.29■■■■□ 3.4
SAMD1-202ENST00000533683 CHL1O00533 1208 aa36.27■■■■□ 3.4
SAMD1-202ENST00000533683 FOXO3O43524 673 aa36.26■■■■□ 3.4
SAMD1-202ENST00000533683 PROSER2Q86WR7 435 aaPredicted RBP36.26■■■■□ 3.4
SAMD1-202ENST00000533683 ORAI2Q96SN7 254 aa36.26■■■■□ 3.4
SAMD1-202ENST00000533683 ANP32EQ9BTT0 268 aa36.26■■■■□ 3.39
SAMD1-202ENST00000533683 ARHGAP45Q92619 1136 aa36.25■■■■□ 3.39
SAMD1-202ENST00000533683 FAM161AQ3B820 660 aa36.24■■■■□ 3.39
SAMD1-202ENST00000533683 RTL1A6NKG5 1358 aa36.23■■■■□ 3.39
SAMD1-202ENST00000533683 CRB1P82279 1406 aa36.23■■■■□ 3.39
SAMD1-202ENST00000533683 LTN1O94822 1766 aa36.23■■■■□ 3.39
SAMD1-202ENST00000533683 NFAT5O94916 1531 aa36.22■■■■□ 3.39
SAMD1-202ENST00000533683 C8orf34Q49A92 452 aa36.22■■■■□ 3.39
SAMD1-202ENST00000533683 IPO9Q96P70 1041 aaKnown RBP36.22■■■■□ 3.39
SAMD1-202ENST00000533683 ZBTB40Q9NUA8 1239 aa36.22■■■■□ 3.39
SAMD1-202ENST00000533683 NPM2Q86SE8 214 aaKnown RBP36.21■■■■□ 3.39
SAMD1-202ENST00000533683 GAS2L2Q8NHY3 880 aa36.2■■■■□ 3.39
SAMD1-202ENST00000533683 LTV1Q96GA3 475 aaPredicted RBP36.2■■■■□ 3.39
SAMD1-202ENST00000533683 RTF1Q92541 710 aaKnown RBP36.18■■■■□ 3.38
SAMD1-202ENST00000533683 IP6K1Q92551 441 aa36.17■■■■□ 3.38
SAMD1-202ENST00000533683 KRT24Q2M2I5 525 aa36.16■■■■□ 3.38
SAMD1-202ENST00000533683 KIAA0232Q92628 1395 aa36.16■■■■□ 3.38
SAMD1-202ENST00000533683 HDAC1Q13547 482 aaPredicted RBP36.16■■■■□ 3.38
SAMD1-202ENST00000533683 PDZRN3Q9UPQ7 1066 aa36.16■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms