RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 C14orf93Q9H972 538 aaKnown RBP3.01□□□□□ -1.93
KNL1-211ENST00000533001 AFDNP55196 1824 aaKnown RBP3.01□□□□□ -1.93
KNL1-211ENST00000533001 FAM182BQ5T319 152 aa3.01□□□□□ -1.93
KNL1-211ENST00000533001 PROSER2Q86WR7 435 aaPredicted RBP3.01□□□□□ -1.93
KNL1-211ENST00000533001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.01□□□□□ -1.93
KNL1-211ENST00000533001 HNRNPUL2Q1KMD3 747 aaKnown RBP3.01□□□□□ -1.93
KNL1-211ENST00000533001 DICER1Q9UPY3 1922 aaKnown RBP3.01□□□□□ -1.93
KNL1-211ENST00000533001 UBR2Q8IWV8 1755 aa3.01□□□□□ -1.93
KNL1-211ENST00000533001 BOD1L1Q8NFC6 3051 aa3.01□□□□□ -1.93
KNL1-211ENST00000533001 ITPR1Q14643 2758 aa3.01□□□□□ -1.93
KNL1-211ENST00000533001 RXRBP28702 533 aa3.01□□□□□ -1.93
KNL1-211ENST00000533001 CCDC88AQ3V6T2 1871 aa3.01□□□□□ -1.93
KNL1-211ENST00000533001 CCDC144AA2RUR9 1427 aa3.01□□□□□ -1.93
KNL1-211ENST00000533001 SPATA31A1Q5TZJ5 1347 aa3□□□□□ -1.93
KNL1-211ENST00000533001 NSD3Q9BZ95 1437 aa3□□□□□ -1.93
KNL1-211ENST00000533001 ATAD2Q6PL18 1390 aa3□□□□□ -1.93
KNL1-211ENST00000533001 TJP1Q07157 1748 aa3□□□□□ -1.93
KNL1-211ENST00000533001 ZNF772Q68DY9 489 aaPredicted RBP3□□□□□ -1.93
KNL1-211ENST00000533001 GPRASP1Q5JY77 1395 aa3□□□□□ -1.93
KNL1-211ENST00000533001 SPTBN4Q9H254 2564 aa3□□□□□ -1.93
KNL1-211ENST00000533001 OVOS2A0A0J9YW53 1432 aa3□□□□□ -1.93
KNL1-211ENST00000533001 KDM6AO15550 1401 aaPredicted RBP3□□□□□ -1.93
KNL1-211ENST00000533001 C1QBPQ07021 282 aaKnown RBP3□□□□□ -1.93
KNL1-211ENST00000533001 FER1L6Q2WGJ9 1857 aa3□□□□□ -1.93
KNL1-211ENST00000533001 OVOS2Q6IE36 1432 aa3□□□□□ -1.93
KNL1-211ENST00000533001 COL4A1P02462 1669 aa3□□□□□ -1.93
KNL1-211ENST00000533001 NUTM2DQ5VT03 806 aaPredicted RBP3□□□□□ -1.93
KNL1-211ENST00000533001 LRRC59Q96AG4 307 aaKnown RBP3□□□□□ -1.93
KNL1-211ENST00000533001 ACIN1Q9UKV3 1341 aaKnown RBP3□□□□□ -1.93
KNL1-211ENST00000533001 FOXO3O43524 673 aa2.99□□□□□ -1.93
KNL1-211ENST00000533001 UNC5CLQ8IV45 518 aa2.99□□□□□ -1.93
KNL1-211ENST00000533001 CABLES1Q8TDN4 633 aa2.99□□□□□ -1.93
KNL1-211ENST00000533001 PRELPP51888 382 aa2.99□□□□□ -1.93
KNL1-211ENST00000533001 SBNO2Q9Y2G9 1366 aa2.99□□□□□ -1.93
KNL1-211ENST00000533001 WDR90Q96KV7 1748 aa2.99□□□□□ -1.93
KNL1-211ENST00000533001 SPENQ96T58 3664 aaKnown RBP2.99□□□□□ -1.93
KNL1-211ENST00000533001 COL11A2P13942 1736 aaPredicted RBP2.99□□□□□ -1.93
KNL1-211ENST00000533001 DSPP15924 2871 aaKnown RBP2.99□□□□□ -1.93
KNL1-211ENST00000533001 LTBP1Q14766 1721 aa2.99□□□□□ -1.93
KNL1-211ENST00000533001 UBTFP17480 764 aaKnown RBP2.99□□□□□ -1.93
KNL1-211ENST00000533001 MARCH10Q8NA82 808 aaPredicted RBP2.99□□□□□ -1.93
KNL1-211ENST00000533001 PARD3Q8TEW0 1356 aa2.99□□□□□ -1.93
KNL1-211ENST00000533001 PLEKHG3A1L390 1219 aa2.98□□□□□ -1.93
KNL1-211ENST00000533001 COL4A5P29400 1685 aa2.98□□□□□ -1.93
KNL1-211ENST00000533001 CCDC125Q86Z20 511 aa2.98□□□□□ -1.93
KNL1-211ENST00000533001 ZNF784Q8NCA9 323 aaPredicted RBP2.98□□□□□ -1.93
KNL1-211ENST00000533001 ERBB3P21860 1342 aa2.98□□□□□ -1.93
KNL1-211ENST00000533001 N4BP2Q86UW6 1770 aaPredicted RBP2.98□□□□□ -1.93
KNL1-211ENST00000533001 KIAA0100Q14667 2235 aaKnown RBP2.98□□□□□ -1.93
KNL1-211ENST00000533001 SEPT12Q8IYM1 358 aa2.98□□□□□ -1.93
KNL1-211ENST00000533001 CFAP46Q8IYW2 2715 aa2.98□□□□□ -1.93
KNL1-211ENST00000533001 KMT2BQ9UMN6 2715 aaPredicted RBP2.98□□□□□ -1.93
KNL1-211ENST00000533001 PLSCR1O15162 318 aa2.98□□□□□ -1.93
KNL1-211ENST00000533001 TRIM52Q96A61 297 aa2.98□□□□□ -1.93
KNL1-211ENST00000533001 SETXQ7Z333 2677 aaKnown RBP2.97□□□□□ -1.93
KNL1-211ENST00000533001 CACNA1AO00555 2505 aa2.97□□□□□ -1.93
KNL1-211ENST00000533001 EZH2Q15910 746 aaKnown RBP2.97□□□□□ -1.93
KNL1-211ENST00000533001 TRPC5Q9UL62 973 aaPredicted RBP2.97□□□□□ -1.93
KNL1-211ENST00000533001 USP31Q70CQ4 1352 aa2.97□□□□□ -1.93
KNL1-211ENST00000533001 ARFGEF2Q9Y6D5 1785 aa2.97□□□□□ -1.93
KNL1-211ENST00000533001 USP6P35125 1406 aa2.97□□□□□ -1.93
KNL1-211ENST00000533001 TSPY4P0CV99 314 aa2.97□□□□□ -1.93
KNL1-211ENST00000533001 TSPY10P0CW01 314 aa2.97□□□□□ -1.93
KNL1-211ENST00000533001 TMEM132EQ6IEE7 984 aa2.97□□□□□ -1.93
KNL1-211ENST00000533001 USP21Q9UK80 565 aa2.97□□□□□ -1.93
KNL1-211ENST00000533001 AKT1S1Q96B36 256 aa2.97□□□□□ -1.93
KNL1-211ENST00000533001 C8orf37Q96NL8 207 aa2.97□□□□□ -1.93
KNL1-211ENST00000533001 MEGF6O75095 1541 aa2.96□□□□□ -1.94
KNL1-211ENST00000533001 EIF3AQ14152 1382 aaKnown RBP2.96□□□□□ -1.94
KNL1-211ENST00000533001 CFAP70Q5T0N1 1121 aa2.96□□□□□ -1.94
KNL1-211ENST00000533001 BARGINQ6ZT62 677 aa2.96□□□□□ -1.94
KNL1-211ENST00000533001 CHIC2Q9UKJ5 165 aa2.96□□□□□ -1.94
KNL1-211ENST00000533001 NINLQ9Y2I6 1382 aa2.96□□□□□ -1.94
KNL1-211ENST00000533001 EPG5Q9HCE0 2579 aa2.96□□□□□ -1.94
KNL1-211ENST00000533001 PAPPA2Q9BXP8 1791 aa2.96□□□□□ -1.94
KNL1-211ENST00000533001 SLC4A9Q96Q91 983 aa2.96□□□□□ -1.94
KNL1-211ENST00000533001 ZNF827Q17R98 1081 aa2.96□□□□□ -1.94
KNL1-211ENST00000533001 SCN11AQ9UI33 1791 aa2.96□□□□□ -1.94
KNL1-211ENST00000533001 POTECB2RU33 542 aa2.95□□□□□ -1.94
KNL1-211ENST00000533001 TNS2Q63HR2 1409 aa2.95□□□□□ -1.94
KNL1-211ENST00000533001 PSDA5PKW4 1024 aaPredicted RBP2.95□□□□□ -1.94
KNL1-211ENST00000533001 XPCQ01831 940 aaPredicted RBP2.95□□□□□ -1.94
KNL1-211ENST00000533001 KDM3BQ7LBC6 1761 aa2.95□□□□□ -1.94
KNL1-211ENST00000533001 KIF3CO14782 793 aa2.95□□□□□ -1.94
KNL1-211ENST00000533001 EN1Q05925 392 aaPredicted RBP2.95□□□□□ -1.94
KNL1-211ENST00000533001 TESK2Q96S53 571 aa2.95□□□□□ -1.94
KNL1-211ENST00000533001 PXDNLA1KZ92 1463 aa2.95□□□□□ -1.94
KNL1-211ENST00000533001 KDRP35968 1356 aa2.95□□□□□ -1.94
KNL1-211ENST00000533001 RPGRIP1LQ68CZ1 1315 aa2.95□□□□□ -1.94
KNL1-211ENST00000533001 NPHP3Q7Z494 1330 aa2.95□□□□□ -1.94
KNL1-211ENST00000533001 KCNA3P22001 575 aa2.95□□□□□ -1.94
KNL1-211ENST00000533001 YBX3P16989 372 aaKnown RBP eCLIP2.95□□□□□ -1.94
KNL1-211ENST00000533001 KCNQ2O43526 872 aa2.94□□□□□ -1.94
KNL1-211ENST00000533001 HOXD11P31277 338 aaPredicted RBP2.94□□□□□ -1.94
KNL1-211ENST00000533001 LARP1Q6PKG0 1096 aaKnown RBP2.94□□□□□ -1.94
KNL1-211ENST00000533001 ARHGEF25Q86VW2 580 aa2.94□□□□□ -1.94
KNL1-211ENST00000533001 IFFO2Q5TF58 517 aa2.94□□□□□ -1.94
KNL1-211ENST00000533001 ADAMTS2O95450 1211 aa2.93□□□□□ -1.94
KNL1-211ENST00000533001 COL3A1P02461 1466 aaPredicted RBP2.93□□□□□ -1.94
KNL1-211ENST00000533001 NBPF1Q3BBV0 1214 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms