RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 PARP4Q9UKK3 1724 aaKnown RBP18.9■□□□□ 0.62
AMBRA1-210ENST00000531542 LRP5O75197 1615 aa18.89■□□□□ 0.62
AMBRA1-210ENST00000531542 CARD10Q9BWT7 1032 aa18.89■□□□□ 0.61
AMBRA1-210ENST00000531542 CD163L1Q9NR16 1453 aa18.89■□□□□ 0.61
AMBRA1-210ENST00000531542 BCL9O00512 1426 aa18.88■□□□□ 0.61
AMBRA1-210ENST00000531542 NFAT5O94916 1531 aa18.88■□□□□ 0.61
AMBRA1-210ENST00000531542 OVOS2A0A0G2JMS6 1433 aa18.87■□□□□ 0.61
AMBRA1-210ENST00000531542 OVOS2A0A0J9YW53 1432 aa18.87■□□□□ 0.61
AMBRA1-210ENST00000531542 ZBTB7CA1YPR0 619 aa18.87■□□□□ 0.61
AMBRA1-210ENST00000531542 PSDA5PKW4 1024 aaPredicted RBP18.87■□□□□ 0.61
AMBRA1-210ENST00000531542 TRIM26Q12899 539 aaPredicted RBP18.87■□□□□ 0.61
AMBRA1-210ENST00000531542 DDB1Q16531 1140 aa18.87■□□□□ 0.61
AMBRA1-210ENST00000531542 OVOS2Q6IE36 1432 aa18.87■□□□□ 0.61
AMBRA1-210ENST00000531542 HDGFL2Q7Z4V5 671 aaPredicted RBP18.87■□□□□ 0.61
AMBRA1-210ENST00000531542 TERF2IPQ9NYB0 399 aa18.86■□□□□ 0.61
AMBRA1-210ENST00000531542 EDC4Q6P2E9 1401 aaKnown RBP18.85■□□□□ 0.61
AMBRA1-210ENST00000531542 NINLQ9Y2I6 1382 aa18.85■□□□□ 0.61
AMBRA1-210ENST00000531542 TESK2Q96S53 571 aa18.85■□□□□ 0.61
AMBRA1-210ENST00000531542 SLC12A5Q9H2X9 1139 aa18.85■□□□□ 0.61
AMBRA1-210ENST00000531542 MON2Q7Z3U7 1717 aa18.85■□□□□ 0.61
AMBRA1-210ENST00000531542 CCDC7Q96M83 1385 aa18.84■□□□□ 0.61
AMBRA1-210ENST00000531542 PLSCR1O15162 318 aa18.84■□□□□ 0.61
AMBRA1-210ENST00000531542 R3HDM1Q15032 1099 aaKnown RBP18.84■□□□□ 0.61
AMBRA1-210ENST00000531542 USP54Q70EL1 1684 aa18.84■□□□□ 0.61
AMBRA1-210ENST00000531542 PEAK1Q9H792 1746 aa18.83■□□□□ 0.61
AMBRA1-210ENST00000531542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.83■□□□□ 0.62e-7■■■□□ 18.4
AMBRA1-210ENST00000531542 TMC1Q8TDI8 760 aa18.83■□□□□ 0.6
AMBRA1-210ENST00000531542 NME9Q86XW9 330 aa18.82■□□□□ 0.6
AMBRA1-210ENST00000531542 BCL11BQ9C0K0 894 aaPredicted RBP18.82■□□□□ 0.6
AMBRA1-210ENST00000531542 SOX12O15370 315 aa18.81■□□□□ 0.6
AMBRA1-210ENST00000531542 CSB-PGBD3P0DP91 1061 aa18.81■□□□□ 0.6
AMBRA1-210ENST00000531542 NBPF14Q5TI25 921 aa18.81■□□□□ 0.6
AMBRA1-210ENST00000531542 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
AMBRA1-210ENST00000531542 A0A1W2PP64 1363 aa18.81■□□□□ 0.6
AMBRA1-210ENST00000531542 ST20-MTHFSA0A0A6YYL1 179 aa18.8■□□□□ 0.6
AMBRA1-210ENST00000531542 MARCH10Q8NA82 808 aaPredicted RBP18.8■□□□□ 0.6
AMBRA1-210ENST00000531542 ERBB3P21860 1342 aa18.79■□□□□ 0.6
AMBRA1-210ENST00000531542 EXOC5O00471 708 aa18.79■□□□□ 0.6
AMBRA1-210ENST00000531542 RREB1Q92766 1687 aa18.79■□□□□ 0.6
AMBRA1-210ENST00000531542 TIMELESSQ9UNS1 1208 aa18.76■□□□□ 0.59
AMBRA1-210ENST00000531542 RGPD3A6NKT7 1758 aaPredicted RBP18.76■□□□□ 0.59
AMBRA1-210ENST00000531542 RGPD4Q7Z3J3 1758 aa18.76■□□□□ 0.59
AMBRA1-210ENST00000531542 TNS2Q63HR2 1409 aa18.74■□□□□ 0.59
AMBRA1-210ENST00000531542 WNK3Q9BYP7 1800 aa18.74■□□□□ 0.59
AMBRA1-210ENST00000531542 IP6K1Q92551 441 aa18.74■□□□□ 0.59
AMBRA1-210ENST00000531542 NUP188Q5SRE5 1749 aa18.74■□□□□ 0.59
AMBRA1-210ENST00000531542 ANKRD24Q8TF21 1146 aa18.73■□□□□ 0.59
AMBRA1-210ENST00000531542 NLRP2Q9NX02 1062 aa18.73■□□□□ 0.59
AMBRA1-210ENST00000531542 RGPD5Q99666 1765 aa18.73■□□□□ 0.59
AMBRA1-210ENST00000531542 ANKRD36BQ8N2N9 1353 aa18.72■□□□□ 0.59
AMBRA1-210ENST00000531542 IL2RBP14784 551 aa18.72■□□□□ 0.59
AMBRA1-210ENST00000531542 TMF1P82094 1093 aa18.72■□□□□ 0.59
AMBRA1-210ENST00000531542 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
AMBRA1-210ENST00000531542 PROM2Q8N271 834 aa18.71■□□□□ 0.59
AMBRA1-210ENST00000531542 COG3Q96JB2 828 aa18.71■□□□□ 0.59
AMBRA1-210ENST00000531542 SBF2Q86WG5 1849 aa18.71■□□□□ 0.59
AMBRA1-210ENST00000531542 CLSPNQ9HAW4 1339 aa18.71■□□□□ 0.59
AMBRA1-210ENST00000531542 USP47Q96K76 1375 aa18.69■□□□□ 0.58
AMBRA1-210ENST00000531542 CDCA8Q53HL2 280 aa18.69■□□□□ 0.58
AMBRA1-210ENST00000531542 SPON1Q9HCB6 807 aa18.68■□□□□ 0.58
AMBRA1-210ENST00000531542 LTN1O94822 1766 aa18.66■□□□□ 0.58
AMBRA1-210ENST00000531542 KCNQ2O43526 872 aa18.66■□□□□ 0.58
AMBRA1-210ENST00000531542 TXNRD1Q16881 649 aa18.66■□□□□ 0.58
AMBRA1-210ENST00000531542 MAP3K19Q56UN5 1328 aa18.66■□□□□ 0.58
AMBRA1-210ENST00000531542 FYB1O15117 783 aa18.65■□□□□ 0.58
AMBRA1-210ENST00000531542 HOXC9P31274 260 aa18.65■□□□□ 0.58
AMBRA1-210ENST00000531542 ANO8Q9HCE9 1232 aaPredicted RBP18.64■□□□□ 0.57
AMBRA1-210ENST00000531542 RTL1A6NKG5 1358 aa18.64■□□□□ 0.57
AMBRA1-210ENST00000531542 FAM208AQ9UK61 1670 aaKnown RBP18.61■□□□□ 0.57
AMBRA1-210ENST00000531542 AMPHP49418 695 aa18.61■□□□□ 0.57
AMBRA1-210ENST00000531542 SLC15A2Q16348 729 aa18.61■□□□□ 0.57
AMBRA1-210ENST00000531542 NHSQ6T4R5 1651 aa18.6■□□□□ 0.57
AMBRA1-210ENST00000531542 KIF24Q5T7B8 1368 aa18.6■□□□□ 0.57
AMBRA1-210ENST00000531542 STK32BQ9NY57 414 aa18.6■□□□□ 0.57
AMBRA1-210ENST00000531542 CGNL1Q0VF96 1302 aa18.59■□□□□ 0.57
AMBRA1-210ENST00000531542 FBLN1P23142 703 aa18.58■□□□□ 0.56
AMBRA1-210ENST00000531542 LTV1Q96GA3 475 aaPredicted RBP18.58■□□□□ 0.56
AMBRA1-210ENST00000531542 ACSBG1Q96GR2 724 aa18.58■□□□□ 0.56
AMBRA1-210ENST00000531542 GGNBP2Q9H3C7 697 aa18.58■□□□□ 0.56
AMBRA1-210ENST00000531542 CASZ1Q86V15 1759 aa18.56■□□□□ 0.56
AMBRA1-210ENST00000531542 CARD14Q9BXL6 1004 aa18.56■□□□□ 0.56
AMBRA1-210ENST00000531542 PPP1R1BQ9UD71 204 aaPredicted RBP18.56■□□□□ 0.56
AMBRA1-210ENST00000531542 INSRP06213 1382 aa18.55■□□□□ 0.56
AMBRA1-210ENST00000531542 RRS1Q15050 365 aaKnown RBP18.55■□□□□ 0.56
AMBRA1-210ENST00000531542 SLC27A3Q5K4L6 730 aa18.55■□□□□ 0.56
AMBRA1-210ENST00000531542 ZCRB1Q8TBF4 217 aaKnown RBP18.55■□□□□ 0.56
AMBRA1-210ENST00000531542 DDX54Q8TDD1 881 aaKnown RBP18.55■□□□□ 0.56
AMBRA1-210ENST00000531542 PDGFDQ9GZP0 370 aaPredicted RBP18.55■□□□□ 0.56
AMBRA1-210ENST00000531542 PTGER2P43116 358 aa18.54■□□□□ 0.56
AMBRA1-210ENST00000531542 NBPF6Q5VWK0 638 aa18.54■□□□□ 0.56
AMBRA1-210ENST00000531542 NBPF4Q96M43 638 aa18.54■□□□□ 0.56
AMBRA1-210ENST00000531542 SMG6Q86US8 1419 aaKnown RBP18.54■□□□□ 0.56
AMBRA1-210ENST00000531542 FLT4P35916 1363 aa18.53■□□□□ 0.56
AMBRA1-210ENST00000531542 MTFR1LQ9H019 292 aa18.52■□□□□ 0.56
AMBRA1-210ENST00000531542 LRRC4BQ9NT99 713 aa18.52■□□□□ 0.56
AMBRA1-210ENST00000531542 PAPPAQ13219 1627 aa18.52■□□□□ 0.55
AMBRA1-210ENST00000531542 MEGF6O75095 1541 aa18.51■□□□□ 0.55
AMBRA1-210ENST00000531542 ZBTB7AO95365 584 aa18.5■□□□□ 0.55
AMBRA1-210ENST00000531542 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
AMBRA1-210ENST00000531542 HSP90AB2PQ58FF8 381 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms