RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 PIK3C2AO00443 1686 aa30.43■■■□□ 2.46
CHKA-206ENST00000531341 BCL11BQ9C0K0 894 aaPredicted RBP30.42■■■□□ 2.46
CHKA-206ENST00000531341 SBF2Q86WG5 1849 aa30.42■■■□□ 2.46
CHKA-206ENST00000531341 WDR17Q8IZU2 1322 aa30.42■■■□□ 2.46
CHKA-206ENST00000531341 ARHGEF25Q86VW2 580 aa30.4■■■□□ 2.46
CHKA-206ENST00000531341 UTRNP46939 3433 aa30.39■■■□□ 2.46
CHKA-206ENST00000531341 SOX12O15370 315 aa30.39■■■□□ 2.46
CHKA-206ENST00000531341 L3MBTL2Q969R5 705 aa30.39■■■□□ 2.46
CHKA-206ENST00000531341 TTC21BQ7Z4L5 1316 aa30.38■■■□□ 2.45
CHKA-206ENST00000531341 CPSF1Q10570 1443 aaKnown RBP30.38■■■□□ 2.45
CHKA-206ENST00000531341 EVC2Q86UK5 1308 aa30.36■■■□□ 2.45
CHKA-206ENST00000531341 RGPD3A6NKT7 1758 aaPredicted RBP30.36■■■□□ 2.45
CHKA-206ENST00000531341 RGPD4Q7Z3J3 1758 aa30.36■■■□□ 2.45
CHKA-206ENST00000531341 NINLQ9Y2I6 1382 aa30.35■■■□□ 2.45
CHKA-206ENST00000531341 CASZ1Q86V15 1759 aa30.33■■■□□ 2.45
CHKA-206ENST00000531341 ZBTB7AO95365 584 aa30.33■■■□□ 2.45
CHKA-206ENST00000531341 CARD10Q9BWT7 1032 aa30.33■■■□□ 2.45
CHKA-206ENST00000531341 WNK3Q9BYP7 1800 aa30.33■■■□□ 2.45
CHKA-206ENST00000531341 BCL9O00512 1426 aa30.32■■■□□ 2.44
CHKA-206ENST00000531341 CSB-PGBD3P0DP91 1061 aa30.31■■■□□ 2.44
CHKA-206ENST00000531341 KCNH5Q8NCM2 988 aa30.31■■■□□ 2.44
CHKA-206ENST00000531341 ZNF692Q9BU19 519 aaPredicted RBP30.31■■■□□ 2.44
CHKA-206ENST00000531341 CDCA7Q9BWT1 371 aaPredicted RBP30.31■■■□□ 2.44
CHKA-206ENST00000531341 RGPD5Q99666 1765 aa30.31■■■□□ 2.44
CHKA-206ENST00000531341 SIN3AQ96ST3 1273 aa30.3■■■□□ 2.44
CHKA-206ENST00000531341 TXNRD1Q16881 649 aa30.29■■■□□ 2.44
CHKA-206ENST00000531341 PTGER2P43116 358 aa30.28■■■□□ 2.44
CHKA-206ENST00000531341 ATF5Q9Y2D1 282 aaPredicted RBP30.28■■■□□ 2.44
CHKA-206ENST00000531341 TRPM1Q7Z4N2 1603 aa30.27■■■□□ 2.44
CHKA-206ENST00000531341 EXOC5O00471 708 aa30.27■■■□□ 2.44
CHKA-206ENST00000531341 NFAT5O94916 1531 aa30.26■■■□□ 2.43
CHKA-206ENST00000531341 TTC21AQ8NDW8 1320 aa30.25■■■□□ 2.43
CHKA-206ENST00000531341 DCAF8L1A6NGE4 600 aa30.25■■■□□ 2.43
CHKA-206ENST00000531341 AKAP12Q02952 1782 aa30.24■■■□□ 2.43
CHKA-206ENST00000531341 SLC15A2Q16348 729 aa30.23■■■□□ 2.43
CHKA-206ENST00000531341 STK32BQ9NY57 414 aa30.22■■■□□ 2.43
CHKA-206ENST00000531341 KTN1Q86UP2 1357 aaKnown RBP30.22■■■□□ 2.43
CHKA-206ENST00000531341 MYOM1P52179 1685 aa30.21■■■□□ 2.43
CHKA-206ENST00000531341 ROCK2O75116 1388 aaKnown RBP30.21■■■□□ 2.43
CHKA-206ENST00000531341 ACSBG1Q96GR2 724 aa30.2■■■□□ 2.43
CHKA-206ENST00000531341 CCDC7Q96M83 1385 aa30.19■■■□□ 2.42
CHKA-206ENST00000531341 NEUROD1Q13562 356 aa30.18■■■□□ 2.42
CHKA-206ENST00000531341 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.18■■■□□ 2.42
CHKA-206ENST00000531341 TNS2Q63HR2 1409 aa30.18■■■□□ 2.42
CHKA-206ENST00000531341 FHDC1Q9C0D6 1143 aaPredicted RBP30.16■■■□□ 2.42
CHKA-206ENST00000531341 NME9Q86XW9 330 aa30.15■■■□□ 2.42
CHKA-206ENST00000531341 SGIP1Q9BQI5 828 aa30.15■■■□□ 2.42
CHKA-206ENST00000531341 SYT17Q9BSW7 474 aa30.14■■■□□ 2.42
CHKA-206ENST00000531341 NLRP2Q9NX02 1062 aa30.13■■■□□ 2.41
CHKA-206ENST00000531341 USP31Q70CQ4 1352 aa30.13■■■□□ 2.41
CHKA-206ENST00000531341 ERBB3P21860 1342 aa30.12■■■□□ 2.41
CHKA-206ENST00000531341 CD163L1Q9NR16 1453 aa30.12■■■□□ 2.41
CHKA-206ENST00000531341 MTFR1LQ9H019 292 aa30.11■■■□□ 2.41
CHKA-206ENST00000531341 ABCC6O95255 1503 aa30.1■■■□□ 2.41
CHKA-206ENST00000531341 NHSQ6T4R5 1651 aa30.1■■■□□ 2.41
CHKA-206ENST00000531341 MON2Q7Z3U7 1717 aa30.1■■■□□ 2.41
CHKA-206ENST00000531341 SBNO2Q9Y2G9 1366 aa30.09■■■□□ 2.41
CHKA-206ENST00000531341 IL2RBP14784 551 aa30.08■■■□□ 2.41
CHKA-206ENST00000531341 ZNF784Q8NCA9 323 aaPredicted RBP30.07■■■□□ 2.4
CHKA-206ENST00000531341 ANKRD24Q8TF21 1146 aa30.07■■■□□ 2.4
CHKA-206ENST00000531341 ZNF827Q17R98 1081 aa30.06■■■□□ 2.4
CHKA-206ENST00000531341 LRRC4BQ9NT99 713 aa30.06■■■□□ 2.4
CHKA-206ENST00000531341 TMC1Q8TDI8 760 aa30.05■■■□□ 2.4
CHKA-206ENST00000531341 SLC12A5Q9H2X9 1139 aa30.05■■■□□ 2.4
CHKA-206ENST00000531341 GOLGB1Q14789 3259 aaKnown RBP30.05■■■□□ 2.4
CHKA-206ENST00000531341 PAPPAQ13219 1627 aa30.04■■■□□ 2.4
CHKA-206ENST00000531341 USP54Q70EL1 1684 aa30.03■■■□□ 2.4
CHKA-206ENST00000531341 ARXQ96QS3 562 aa30.02■■■□□ 2.4
CHKA-206ENST00000531341 LTN1O94822 1766 aa30■■■□□ 2.39
CHKA-206ENST00000531341 BTAF1O14981 1849 aa29.99■■■□□ 2.39
CHKA-206ENST00000531341 HDGFL2Q7Z4V5 671 aaPredicted RBP29.98■■■□□ 2.39
CHKA-206ENST00000531341 CARD11Q9BXL7 1154 aa29.98■■■□□ 2.39
CHKA-206ENST00000531341 AKT1S1Q96B36 256 aa29.96■■■□□ 2.39
CHKA-206ENST00000531341 A0A1W2PP64 1363 aa29.95■■■□□ 2.39
CHKA-206ENST00000531341 DDX54Q8TDD1 881 aaKnown RBP29.95■■■□□ 2.39
CHKA-206ENST00000531341 EDC4Q6P2E9 1401 aaKnown RBP29.95■■■□□ 2.38
CHKA-206ENST00000531341 IP6K1Q92551 441 aa29.94■■■□□ 2.38
CHKA-206ENST00000531341 LTV1Q96GA3 475 aaPredicted RBP29.94■■■□□ 2.38
CHKA-206ENST00000531341 KCNQ4P56696 695 aa29.93■■■□□ 2.38
CHKA-206ENST00000531341 FBLN1P23142 703 aa29.91■■■□□ 2.38
CHKA-206ENST00000531341 MAP3K5Q99683 1374 aa29.9■■■□□ 2.38
CHKA-206ENST00000531341 TERF2IPQ9NYB0 399 aa29.89■■■□□ 2.38
CHKA-206ENST00000531341 PNPLA7Q6ZV29 1317 aa29.88■■■□□ 2.37
CHKA-206ENST00000531341 KAT6BQ8WYB5 2073 aa29.86■■■□□ 2.37
CHKA-206ENST00000531341 PRIM1P49642 420 aaKnown RBP29.86■■■□□ 2.37
CHKA-206ENST00000531341 SLC27A3Q5K4L6 730 aa29.86■■■□□ 2.37
CHKA-206ENST00000531341 KLHL34Q8N239 644 aa29.85■■■□□ 2.37
CHKA-206ENST00000531341 SYTL4Q96C24 671 aaPredicted RBP29.85■■■□□ 2.37
CHKA-206ENST00000531341 GPR162Q16538 588 aa29.84■■■□□ 2.37
CHKA-206ENST00000531341 MAP3K19Q56UN5 1328 aa29.83■■■□□ 2.37
CHKA-206ENST00000531341 HOXC9P31274 260 aa29.83■■■□□ 2.37
CHKA-206ENST00000531341 SLC16A10Q8TF71 515 aa29.83■■■□□ 2.37
CHKA-206ENST00000531341 NSD2O96028 1365 aa29.82■■■□□ 2.36
CHKA-206ENST00000531341 PUS7Q96PZ0 661 aaKnown RBP29.82■■■□□ 2.36
CHKA-206ENST00000531341 TFCP2L1Q9NZI6 479 aa29.82■■■□□ 2.36
CHKA-206ENST00000531341 CHD4Q14839 1912 aa29.82■■■□□ 2.36
CHKA-206ENST00000531341 ANKRD36BQ8N2N9 1353 aa29.8■■■□□ 2.36
CHKA-206ENST00000531341 C1QTNF8P60827 252 aa29.8■■■□□ 2.36
CHKA-206ENST00000531341 POLD1P28340 1107 aa29.79■■■□□ 2.36
CHKA-206ENST00000531341 NLGN2Q8NFZ4 835 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms