RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 MAP2P11137 1827 aaKnown RBP14.72□□□□□ -0.05
USP35-207ENST00000530546 NFE2L2Q16236 605 aa14.72□□□□□ -0.05
USP35-207ENST00000530546 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.72□□□□□ -0.05
USP35-207ENST00000530546 TBX22Q9Y458 520 aa14.72□□□□□ -0.05
USP35-207ENST00000530546 PODXL2Q9NZ53 605 aa14.71□□□□□ -0.05
USP35-207ENST00000530546 NGDNQ8NEJ9 315 aaKnown RBP14.7□□□□□ -0.06
USP35-207ENST00000530546 PCDHB15Q9Y5E8 787 aa14.7□□□□□ -0.06
USP35-207ENST00000530546 IL16Q14005 1332 aa14.7□□□□□ -0.06
USP35-207ENST00000530546 PLEKHG3A1L390 1219 aa14.7□□□□□ -0.06
USP35-207ENST00000530546 DZIP1LQ8IYY4 767 aaKnown RBP14.7□□□□□ -0.06
USP35-207ENST00000530546 AATKQ6ZMQ8 1374 aa14.7□□□□□ -0.06
USP35-207ENST00000530546 NOB1Q9ULX3 412 aaKnown RBP14.7□□□□□ -0.06
USP35-207ENST00000530546 ELL2O00472 640 aaPredicted RBP14.69□□□□□ -0.06
USP35-207ENST00000530546 FER1L4A9Z1Z3 1794 aa14.69□□□□□ -0.06
USP35-207ENST00000530546 AEBP1Q8IUX7 1158 aa14.69□□□□□ -0.06
USP35-207ENST00000530546 CT47B1P0C2W7 299 aaPredicted RBP14.68□□□□□ -0.06
USP35-207ENST00000530546 KCNA6P17658 529 aa14.68□□□□□ -0.06
USP35-207ENST00000530546 MVPQ14764 893 aaKnown RBP14.68□□□□□ -0.06
USP35-207ENST00000530546 CDK12Q9NYV4 1490 aaPredicted RBP14.68□□□□□ -0.06
USP35-207ENST00000530546 FAM83GA6ND36 823 aa14.68□□□□□ -0.06
USP35-207ENST00000530546 TRIM27P14373 513 aa14.68□□□□□ -0.06
USP35-207ENST00000530546 DCTN1Q14203 1278 aa14.68□□□□□ -0.06
USP35-207ENST00000530546 RBM33Q96EV2 1170 aaKnown RBP14.68□□□□□ -0.06
USP35-207ENST00000530546 EIF4A2Q14240 407 aaKnown RBP14.67□□□□□ -0.06
USP35-207ENST00000530546 SULT6B1Q6IMI4 303 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 ITPRIPQ8IWB1 547 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 MON2Q7Z3U7 1717 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 ARHGAP23Q9P227 1491 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 HSP90AB2PQ58FF8 381 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 ITSN1Q15811 1721 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 USP6P35125 1406 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 SLIT1O75093 1534 aa14.67□□□□□ -0.06
USP35-207ENST00000530546 FAM161AQ3B820 660 aa14.66□□□□□ -0.06
USP35-207ENST00000530546 NUTM2GQ5VZR2 741 aa14.66□□□□□ -0.06
USP35-207ENST00000530546 ATF7IPQ6VMQ6 1270 aa14.65□□□□□ -0.06
USP35-207ENST00000530546 AKAP12Q02952 1782 aa14.65□□□□□ -0.06
USP35-207ENST00000530546 TSPYL6Q8N831 410 aa14.64□□□□□ -0.07
USP35-207ENST00000530546 C8orf34Q49A92 452 aa14.64□□□□□ -0.07
USP35-207ENST00000530546 TMEM57Q8N5G2 664 aa14.64□□□□□ -0.07
USP35-207ENST00000530546 MBIPQ9NS73 344 aa14.64□□□□□ -0.07
USP35-207ENST00000530546 GNAI1P63096 354 aa14.63□□□□□ -0.07
USP35-207ENST00000530546 CALD1Q05682 793 aaKnown RBP14.63□□□□□ -0.07
USP35-207ENST00000530546 RWDD1Q9H446 243 aaPredicted RBP14.63□□□□□ -0.07
USP35-207ENST00000530546 C14orf37Q86TY3 774 aa14.62□□□□□ -0.07
USP35-207ENST00000530546 OVOS2A0A0J9YW53 1432 aa14.62□□□□□ -0.07
USP35-207ENST00000530546 OVOS2Q6IE36 1432 aa14.62□□□□□ -0.07
USP35-207ENST00000530546 IPO8O15397 1037 aaKnown RBP14.61□□□□□ -0.07
USP35-207ENST00000530546 LMOD3Q0VAK6 560 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 IFT57Q9NWB7 429 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 PDZRN3Q9UPQ7 1066 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 MAP3K19Q56UN5 1328 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 NLRP6P59044 892 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 PTCH1Q13635 1447 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 KIF16BQ96L93 1317 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 VAMP4O75379 141 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 AMPHP49418 695 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 AAMPQ13685 434 aa14.61□□□□□ -0.07
USP35-207ENST00000530546 ANKLE2Q86XL3 938 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 DDX19BQ9UMR2 479 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 ALDH1L2Q3SY69 923 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 MCM10Q7L590 875 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 C8orf58Q8NAV2 365 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 DIP2AQ14689 1571 aa14.6□□□□□ -0.07
USP35-207ENST00000530546 FRAT2O75474 233 aaPredicted RBP14.59□□□□□ -0.07
USP35-207ENST00000530546 TWISTNBQ3B726 338 aaPredicted RBP14.59□□□□□ -0.07
USP35-207ENST00000530546 TTC21AQ8NDW8 1320 aa14.59□□□□□ -0.07
USP35-207ENST00000530546 TOPAZ1Q8N9V7 1692 aa14.59□□□□□ -0.07
USP35-207ENST00000530546 CFAP44Q96MT7 982 aa14.59□□□□□ -0.07
USP35-207ENST00000530546 ZMYND15Q9H091 742 aa14.59□□□□□ -0.07
USP35-207ENST00000530546 L1TD1Q5T7N2 865 aaKnown RBP14.58□□□□□ -0.07
USP35-207ENST00000530546 ZNF853P0CG23 659 aa14.58□□□□□ -0.08
USP35-207ENST00000530546 SSH2Q76I76 1423 aa14.58□□□□□ -0.08
USP35-207ENST00000530546 RRP9O43818 475 aaKnown RBP14.58□□□□□ -0.08
USP35-207ENST00000530546 NRKQ7Z2Y5 1582 aa14.57□□□□□ -0.08
USP35-207ENST00000530546 CEP170BQ9Y4F5 1589 aaPredicted RBP14.57□□□□□ -0.08
USP35-207ENST00000530546 RIMS1Q86UR5 1692 aaKnown RBP14.57□□□□□ -0.08
USP35-207ENST00000530546 MRPL50Q8N5N7 158 aaKnown RBP14.57□□□□□ -0.08
USP35-207ENST00000530546 USP31Q70CQ4 1352 aa14.57□□□□□ -0.08
USP35-207ENST00000530546 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
USP35-207ENST00000530546 KRT24Q2M2I5 525 aa14.57□□□□□ -0.08
USP35-207ENST00000530546 ABTB2Q8N961 1025 aa14.57□□□□□ -0.08
USP35-207ENST00000530546 LTV1Q96GA3 475 aaPredicted RBP14.57□□□□□ -0.08
USP35-207ENST00000530546 RGPD8O14715 1765 aaPredicted RBP14.56□□□□□ -0.08
USP35-207ENST00000530546 FOXO3O43524 673 aa14.56□□□□□ -0.08
USP35-207ENST00000530546 VSIG10Q8N0Z9 540 aa14.56□□□□□ -0.08
USP35-207ENST00000530546 RRAGDQ9NQL2 400 aaPredicted RBP14.55□□□□□ -0.08
USP35-207ENST00000530546 PEAK1Q9H792 1746 aa14.55□□□□□ -0.08
USP35-207ENST00000530546 ZBTB7CA1YPR0 619 aa14.55□□□□□ -0.08
USP35-207ENST00000530546 C1orf115Q9H7X2 142 aa14.55□□□□□ -0.08
USP35-207ENST00000530546 ZBTB40Q9NUA8 1239 aa14.55□□□□□ -0.08
USP35-207ENST00000530546 MIS18AQ9NYP9 233 aa14.55□□□□□ -0.08
USP35-207ENST00000530546 ZNF428Q96B54 188 aa14.54□□□□□ -0.08
USP35-207ENST00000530546 SEC24BO95487 1268 aa14.54□□□□□ -0.08
USP35-207ENST00000530546 EYA1Q99502 592 aa14.54□□□□□ -0.08
USP35-207ENST00000530546 FLT4P35916 1363 aa14.53□□□□□ -0.08
USP35-207ENST00000530546 SBNO1A3KN83 1393 aa14.53□□□□□ -0.08
USP35-207ENST00000530546 HSP90AA2PQ14568 343 aaPredicted RBP14.53□□□□□ -0.08
USP35-207ENST00000530546 MTHFSDQ2M296 383 aaKnown RBP14.53□□□□□ -0.08
USP35-207ENST00000530546 PHF8Q9UPP1 1060 aa14.53□□□□□ -0.08
USP35-207ENST00000530546 XRN1Q8IZH2 1706 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms