RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 CT47B1P0C2W7 299 aaPredicted RBP19.79■□□□□ 0.76
USP35-206ENST00000530535 FMN2Q9NZ56 1722 aa19.79■□□□□ 0.76
USP35-206ENST00000530535 AKAP12Q02952 1782 aa19.79■□□□□ 0.76
USP35-206ENST00000530535 ITSN1Q15811 1721 aa19.79■□□□□ 0.76
USP35-206ENST00000530535 RWDD1Q9H446 243 aaPredicted RBP19.79■□□□□ 0.76
USP35-206ENST00000530535 ZKSCAN2Q63HK3 967 aa19.78■□□□□ 0.76
USP35-206ENST00000530535 TSR2Q969E8 191 aaKnown RBP19.78■□□□□ 0.76
USP35-206ENST00000530535 TBC1D32Q96NH3 1257 aa19.78■□□□□ 0.76
USP35-206ENST00000530535 TRIM35Q9UPQ4 493 aa19.78■□□□□ 0.76
USP35-206ENST00000530535 MON2Q7Z3U7 1717 aa19.78■□□□□ 0.76
USP35-206ENST00000530535 RGPD8O14715 1765 aaPredicted RBP19.77■□□□□ 0.76
USP35-206ENST00000530535 BRPF3Q9ULD4 1205 aa19.77■□□□□ 0.76
USP35-206ENST00000530535 TMPOP42166 694 aaKnown RBP19.76■□□□□ 0.75
USP35-206ENST00000530535 DZIP1LQ8IYY4 767 aaKnown RBP19.76■□□□□ 0.75
USP35-206ENST00000530535 NGDNQ8NEJ9 315 aaKnown RBP19.76■□□□□ 0.75
USP35-206ENST00000530535 KIF20BQ96Q89 1820 aa19.76■□□□□ 0.75
USP35-206ENST00000530535 BECN1Q14457 450 aa19.75■□□□□ 0.75
USP35-206ENST00000530535 NME9Q86XW9 330 aa19.75■□□□□ 0.75
USP35-206ENST00000530535 ANTXR1Q9H6X2 564 aa19.75■□□□□ 0.75
USP35-206ENST00000530535 EXOSC9Q06265 439 aaKnown RBP19.75■□□□□ 0.75
USP35-206ENST00000530535 USP6P35125 1406 aa19.75■□□□□ 0.75
USP35-206ENST00000530535 STRCP1A6NGW2 1772 aa19.74■□□□□ 0.75
USP35-206ENST00000530535 TRIM27P14373 513 aa19.74■□□□□ 0.75
USP35-206ENST00000530535 C19orf44Q9H6X5 657 aa19.74■□□□□ 0.75
USP35-206ENST00000530535 TTC21BQ7Z4L5 1316 aa19.74■□□□□ 0.75
USP35-206ENST00000530535 TMEM94Q12767 1356 aa19.73■□□□□ 0.75
USP35-206ENST00000530535 IL16Q14005 1332 aa19.73■□□□□ 0.75
USP35-206ENST00000530535 SSH1Q8WYL5 1049 aa19.73■□□□□ 0.75
USP35-206ENST00000530535 PNPLA6Q8IY17 1366 aa19.72■□□□□ 0.75
USP35-206ENST00000530535 U2SURPO15042 1029 aaKnown RBP19.72■□□□□ 0.75
USP35-206ENST00000530535 FTSJ3Q8IY81 847 aaKnown RBP19.72■□□□□ 0.75
USP35-206ENST00000530535 RTN4Q9NQC3 1192 aaKnown RBP19.72■□□□□ 0.75
USP35-206ENST00000530535 SMC4Q9NTJ3 1288 aa19.72■□□□□ 0.75
USP35-206ENST00000530535 NCOA3Q9Y6Q9 1424 aa19.71■□□□□ 0.75
USP35-206ENST00000530535 HDAC1Q13547 482 aaPredicted RBP19.71■□□□□ 0.75
USP35-206ENST00000530535 ZRANB1Q9UGI0 708 aa19.71■□□□□ 0.75
USP35-206ENST00000530535 PHF8Q9UPP1 1060 aa19.71■□□□□ 0.75
USP35-206ENST00000530535 SSH2Q76I76 1423 aa19.71■□□□□ 0.75
USP35-206ENST00000530535 COG3Q96JB2 828 aa19.7■□□□□ 0.74
USP35-206ENST00000530535 TBC1D2Q9BYX2 928 aa19.7■□□□□ 0.74
USP35-206ENST00000530535 UPF2Q9HAU5 1272 aaKnown RBP19.7■□□□□ 0.74
USP35-206ENST00000530535 NRKQ7Z2Y5 1582 aa19.7■□□□□ 0.74
USP35-206ENST00000530535 ESCO1Q5FWF5 840 aa19.69■□□□□ 0.74
USP35-206ENST00000530535 ATF7IPQ6VMQ6 1270 aa19.69■□□□□ 0.74
USP35-206ENST00000530535 SLKQ9H2G2 1235 aaPredicted RBP19.69■□□□□ 0.74
USP35-206ENST00000530535 TTC21AQ8NDW8 1320 aa19.68■□□□□ 0.74
USP35-206ENST00000530535 LRRC7Q96NW7 1537 aa19.67■□□□□ 0.74
USP35-206ENST00000530535 FBLN1P23142 703 aa19.67■□□□□ 0.74
USP35-206ENST00000530535 DDX19BQ9UMR2 479 aa19.67■□□□□ 0.74
USP35-206ENST00000530535 ATF3P18847 181 aa19.66■□□□□ 0.74
USP35-206ENST00000530535 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
USP35-206ENST00000530535 NOB1Q9ULX3 412 aaKnown RBP19.66■□□□□ 0.74
USP35-206ENST00000530535 ZNF335Q9H4Z2 1342 aaPredicted RBP19.66■□□□□ 0.74
USP35-206ENST00000530535 RIPK4P57078 832 aa19.65■□□□□ 0.74
USP35-206ENST00000530535 ITPRIPQ8IWB1 547 aa19.65■□□□□ 0.74
USP35-206ENST00000530535 ORAI2Q96SN7 254 aa19.65■□□□□ 0.74
USP35-206ENST00000530535 DIAPH1O60610 1272 aaKnown RBP19.64■□□□□ 0.74
USP35-206ENST00000530535 TMEM57Q8N5G2 664 aa19.64■□□□□ 0.74
USP35-206ENST00000530535 ZBTB40Q9NUA8 1239 aa19.64■□□□□ 0.74
USP35-206ENST00000530535 POLKQ9UBT6 870 aa19.64■□□□□ 0.74
USP35-206ENST00000530535 DCCP43146 1447 aa19.64■□□□□ 0.73
USP35-206ENST00000530535 AATKQ6ZMQ8 1374 aa19.63■□□□□ 0.73
USP35-206ENST00000530535 C1orf167Q5SNV9 1468 aa19.63■□□□□ 0.73
USP35-206ENST00000530535 OVOS2A0A0J9YW53 1432 aa19.62■□□□□ 0.73
USP35-206ENST00000530535 OVOS2Q6IE36 1432 aa19.62■□□□□ 0.73
USP35-206ENST00000530535 PSME1Q06323 249 aa19.62■□□□□ 0.73
USP35-206ENST00000530535 CADPS2Q86UW7 1296 aa19.62■□□□□ 0.73
USP35-206ENST00000530535 KIF16BQ96L93 1317 aa19.62■□□□□ 0.73
USP35-206ENST00000530535 MSH6P52701 1360 aa19.62■□□□□ 0.73
USP35-206ENST00000530535 ALDH1L2Q3SY69 923 aa19.6■□□□□ 0.73
USP35-206ENST00000530535 MAP2P11137 1827 aaKnown RBP19.6■□□□□ 0.73
USP35-206ENST00000530535 USP31Q70CQ4 1352 aa19.6■□□□□ 0.73
USP35-206ENST00000530535 C22orf23Q9BZE7 217 aa19.6■□□□□ 0.73
USP35-206ENST00000530535 RSPH6AQ9H0K4 717 aa19.6■□□□□ 0.73
USP35-206ENST00000530535 EMILIN1Q9Y6C2 1016 aa19.6■□□□□ 0.73
USP35-206ENST00000530535 MST1RQ04912 1400 aa19.59■□□□□ 0.73
USP35-206ENST00000530535 FOXO3O43524 673 aa19.59■□□□□ 0.73
USP35-206ENST00000530535 FCHSD2O94868 740 aa19.59■□□□□ 0.73
USP35-206ENST00000530535 PNNQ9H307 717 aaKnown RBP19.59■□□□□ 0.73
USP35-206ENST00000530535 NLRP6P59044 892 aa19.58■□□□□ 0.73
USP35-206ENST00000530535 RRS1Q15050 365 aaKnown RBP19.58■□□□□ 0.73
USP35-206ENST00000530535 ABTB2Q8N961 1025 aa19.58■□□□□ 0.73
USP35-206ENST00000530535 XIRP1Q702N8 1843 aaKnown RBP19.58■□□□□ 0.72
USP35-206ENST00000530535 BRPF1P55201 1214 aaPredicted RBP19.58■□□□□ 0.72
USP35-206ENST00000530535 MFAP1P55081 439 aaKnown RBP19.57■□□□□ 0.72
USP35-206ENST00000530535 IPO8O15397 1037 aaKnown RBP19.57■□□□□ 0.72
USP35-206ENST00000530535 PIK3C2AO00443 1686 aa19.57■□□□□ 0.72
USP35-206ENST00000530535 NUCB1Q02818 461 aa19.56■□□□□ 0.72
USP35-206ENST00000530535 PRKAR2BP31323 418 aa19.55■□□□□ 0.72
USP35-206ENST00000530535 NUTM2GQ5VZR2 741 aa19.55■□□□□ 0.72
USP35-206ENST00000530535 ANO8Q9HCE9 1232 aaPredicted RBP19.54■□□□□ 0.72
USP35-206ENST00000530535 KIF1AQ12756 1690 aa19.54■□□□□ 0.72
USP35-206ENST00000530535 CDK12Q9NYV4 1490 aaPredicted RBP19.53■□□□□ 0.72
USP35-206ENST00000530535 SOX12O15370 315 aa19.53■□□□□ 0.72
USP35-206ENST00000530535 XPCQ01831 940 aaPredicted RBP19.53■□□□□ 0.72
USP35-206ENST00000530535 KRT28Q7Z3Y7 464 aa19.53■□□□□ 0.72
USP35-206ENST00000530535 ZNF428Q96B54 188 aa19.53■□□□□ 0.72
USP35-206ENST00000530535 PHACTR3Q96KR7 559 aa19.52■□□□□ 0.72
USP35-206ENST00000530535 NFE2L2Q16236 605 aa19.51■□□□□ 0.71
USP35-206ENST00000530535 RBM25P49756 843 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms