RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 VIRMAQ69YN4 1812 aaKnown RBP15.7■□□□□ 0.1
CAPN1-208ENST00000527323 FYB1O15117 783 aa15.7■□□□□ 0.1
CAPN1-208ENST00000527323 CT47B1P0C2W7 299 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-208ENST00000527323 TMPOP42166 694 aaKnown RBP15.69■□□□□ 0.1
CAPN1-208ENST00000527323 HDAC1Q13547 482 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-208ENST00000527323 HOMEZQ8IX15 550 aa15.69■□□□□ 0.1
CAPN1-208ENST00000527323 SETBP1Q9Y6X0 1596 aa15.69■□□□□ 0.1
CAPN1-208ENST00000527323 IQSEC2Q5JU85 1478 aa15.68■□□□□ 0.1
CAPN1-208ENST00000527323 ABCC11Q96J66 1382 aa15.68■□□□□ 0.1
CAPN1-208ENST00000527323 PLEKHG1Q9ULL1 1385 aa15.68■□□□□ 0.1
CAPN1-208ENST00000527323 TMEM57Q8N5G2 664 aa15.68■□□□□ 0.1
CAPN1-208ENST00000527323 HDGFL2Q7Z4V5 671 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-208ENST00000527323 NGDNQ8NEJ9 315 aaKnown RBP15.68■□□□□ 0.1
CAPN1-208ENST00000527323 NEURL4Q96JN8 1562 aa15.68■□□□□ 0.1
CAPN1-208ENST00000527323 LNPKQ9C0E8 428 aa15.67■□□□□ 0.1
CAPN1-208ENST00000527323 TERF2IPQ9NYB0 399 aa15.67■□□□□ 0.1
CAPN1-208ENST00000527323 MYO3AQ8NEV4 1616 aa15.67■□□□□ 0.1
CAPN1-208ENST00000527323 RIPK4P57078 832 aa15.67■□□□□ 0.1
CAPN1-208ENST00000527323 TBX22Q9Y458 520 aa15.67■□□□□ 0.1
CAPN1-208ENST00000527323 CEP170BQ9Y4F5 1589 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-208ENST00000527323 IPO8O15397 1037 aaKnown RBP15.66■□□□□ 0.1
CAPN1-208ENST00000527323 FSD2A1L4K1 749 aa15.66■□□□□ 0.1
CAPN1-208ENST00000527323 NAP1L5Q96NT1 182 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-208ENST00000527323 CCDC61Q9Y6R9 512 aa15.66■□□□□ 0.1
CAPN1-208ENST00000527323 HSP90AA1P07900 732 aaKnown RBP15.66■□□□□ 0.1
CAPN1-208ENST00000527323 HSP90AB1P08238 724 aaKnown RBP15.66■□□□□ 0.1
CAPN1-208ENST00000527323 PROSER2Q86WR7 435 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-208ENST00000527323 ACEP12821 1306 aa15.66■□□□□ 0.1
CAPN1-208ENST00000527323 PPIP5K1Q6PFW1 1433 aa15.66■□□□□ 0.1
CAPN1-208ENST00000527323 DDX11L8A8MPP1 907 aa15.65■□□□□ 0.1
CAPN1-208ENST00000527323 ESCO1Q5FWF5 840 aa15.65■□□□□ 0.1
CAPN1-208ENST00000527323 SMC5Q8IY18 1101 aa15.65■□□□□ 0.1
CAPN1-208ENST00000527323 ORAI2Q96SN7 254 aa15.65■□□□□ 0.1
CAPN1-208ENST00000527323 PNNQ9H307 717 aaKnown RBP15.65■□□□□ 0.1
CAPN1-208ENST00000527323 EMILIN1Q9Y6C2 1016 aa15.65■□□□□ 0.1
CAPN1-208ENST00000527323 TRIM35Q9UPQ4 493 aa15.65■□□□□ 0.1
CAPN1-208ENST00000527323 SHPRHQ149N8 1683 aa15.65■□□□□ 0.1
CAPN1-208ENST00000527323 MRE11P49959 708 aa15.64■□□□□ 0.09
CAPN1-208ENST00000527323 FOXO3O43524 673 aa15.64■□□□□ 0.09
CAPN1-208ENST00000527323 UBE2Q2Q8WVN8 375 aa15.63■□□□□ 0.09
CAPN1-208ENST00000527323 ADAMTSL3P82987 1691 aa15.63■□□□□ 0.09
CAPN1-208ENST00000527323 ANKRD36BQ8N2N9 1353 aa15.63■□□□□ 0.09
CAPN1-208ENST00000527323 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
CAPN1-208ENST00000527323 ZBTB40Q9NUA8 1239 aa15.63■□□□□ 0.09
CAPN1-208ENST00000527323 PLEKHF1Q96S99 279 aa15.62■□□□□ 0.09
CAPN1-208ENST00000527323 SETD1BQ9UPS6 1966 aaKnown RBP15.62■□□□□ 0.09
CAPN1-208ENST00000527323 HMOX1P09601 288 aa15.62■□□□□ 0.09
CAPN1-208ENST00000527323 ANKRD45Q5TZF3 282 aa15.62■□□□□ 0.09
CAPN1-208ENST00000527323 GRPEL1Q9HAV7 217 aa15.61■□□□□ 0.09
CAPN1-208ENST00000527323 NSD2O96028 1365 aa15.61■□□□□ 0.09
CAPN1-208ENST00000527323 KIF16BQ96L93 1317 aa15.61■□□□□ 0.09
CAPN1-208ENST00000527323 NUCB1Q02818 461 aa15.61■□□□□ 0.09
CAPN1-208ENST00000527323 CHD1LQ86WJ1 897 aa15.61■□□□□ 0.09
CAPN1-208ENST00000527323 DIAPH1O60610 1272 aaKnown RBP15.59■□□□□ 0.09
CAPN1-208ENST00000527323 TNPO1Q92973 898 aaKnown RBP15.59■□□□□ 0.09
CAPN1-208ENST00000527323 LTV1Q96GA3 475 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-208ENST00000527323 GBP4Q96PP9 640 aa15.59■□□□□ 0.09
CAPN1-208ENST00000527323 SETD1AO15047 1707 aaKnown RBP15.59■□□□□ 0.09
CAPN1-208ENST00000527323 PUS7Q96PZ0 661 aaKnown RBP15.59■□□□□ 0.09
CAPN1-208ENST00000527323 ATAD2Q6PL18 1390 aa15.59■□□□□ 0.09
CAPN1-208ENST00000527323 RBM25P49756 843 aaKnown RBP15.59■□□□□ 0.09
CAPN1-208ENST00000527323 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.58■□□□□ 0.09
CAPN1-208ENST00000527323 CD163L1Q9NR16 1453 aa15.58■□□□□ 0.09
CAPN1-208ENST00000527323 TRIM44Q96DX7 344 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-208ENST00000527323 ZNF692Q9BU19 519 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-208ENST00000527323 CLCN1P35523 988 aa15.58■□□□□ 0.08
CAPN1-208ENST00000527323 IL16Q14005 1332 aa15.58■□□□□ 0.08
CAPN1-208ENST00000527323 SNX21Q969T3 373 aa15.57■□□□□ 0.08
CAPN1-208ENST00000527323 C1orf115Q9H7X2 142 aa15.57■□□□□ 0.08
CAPN1-208ENST00000527323 ZNF335Q9H4Z2 1342 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-208ENST00000527323 ARHGAP23Q9P227 1491 aa15.57■□□□□ 0.08
CAPN1-208ENST00000527323 NPHP4O75161 1426 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-208ENST00000527323 ELL2O00472 640 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-208ENST00000527323 HAP1P54257 671 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-208ENST00000527323 SLIT1O75093 1534 aa15.55■□□□□ 0.08
CAPN1-208ENST00000527323 NLRP6P59044 892 aa15.55■□□□□ 0.08
CAPN1-208ENST00000527323 ALDH1L2Q3SY69 923 aa15.54■□□□□ 0.08
CAPN1-208ENST00000527323 BMP2KLQ5H9B9 411 aa15.54■□□□□ 0.08
CAPN1-208ENST00000527323 CIZ1Q9ULV3 898 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-208ENST00000527323 ABTB2Q8N961 1025 aa15.54■□□□□ 0.08
CAPN1-208ENST00000527323 COG3Q96JB2 828 aa15.54■□□□□ 0.08
CAPN1-208ENST00000527323 RGPD8O14715 1765 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-208ENST00000527323 POLKQ9UBT6 870 aa15.54■□□□□ 0.08
CAPN1-208ENST00000527323 ESPNB1AK53 854 aa15.53■□□□□ 0.08
CAPN1-208ENST00000527323 PRKAR2BP31323 418 aa15.53■□□□□ 0.08
CAPN1-208ENST00000527323 PSME1Q06323 249 aa15.53■□□□□ 0.08
CAPN1-208ENST00000527323 SKOR2Q2VWA4 1001 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-208ENST00000527323 ISY1Q9ULR0 285 aaKnown RBP15.53■□□□□ 0.08
CAPN1-208ENST00000527323 CPS1P31327 1500 aa15.53■□□□□ 0.08
CAPN1-208ENST00000527323 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
CAPN1-208ENST00000527323 CHMP4BQ9H444 224 aaKnown RBP15.53■□□□□ 0.08
CAPN1-208ENST00000527323 MED14O60244 1454 aa15.53■□□□□ 0.08
CAPN1-208ENST00000527323 CABLES1Q8TDN4 633 aa15.52■□□□□ 0.08
CAPN1-208ENST00000527323 GCC1Q96CN9 775 aa15.52■□□□□ 0.08
CAPN1-208ENST00000527323 THUMPD2Q9BTF0 503 aaKnown RBP15.52■□□□□ 0.08
CAPN1-208ENST00000527323 DDIT3P35638 169 aa15.52■□□□□ 0.08
CAPN1-208ENST00000527323 RAB3GAP1Q15042 981 aa15.52■□□□□ 0.08
CAPN1-208ENST00000527323 HSP90AB2PQ58FF8 381 aa15.52■□□□□ 0.08
CAPN1-208ENST00000527323 GAS2L3Q86XJ1 694 aa15.52■□□□□ 0.08
CAPN1-208ENST00000527323 TTC21BQ7Z4L5 1316 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms