RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 KIF2CQ99661 725 aa13.89□□□□□ -0.19
CLNS1A-204ENST00000525428 KIAA2012Q0VF49 1180 aa13.88□□□□□ -0.19
CLNS1A-204ENST00000525428 CAMSAP1Q5T5Y3 1602 aa13.88□□□□□ -0.19
CLNS1A-204ENST00000525428 NINLQ9Y2I6 1382 aa13.88□□□□□ -0.19
CLNS1A-204ENST00000525428 LETM1O95202 739 aaPredicted RBP13.88□□□□□ -0.19
CLNS1A-204ENST00000525428 SLC52A1Q9NWF4 448 aa13.88□□□□□ -0.19
CLNS1A-204ENST00000525428 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.87□□□□□ -0.193e-8■■■□□ 15.7
CLNS1A-204ENST00000525428 LMBRD1Q9NUN5 540 aa13.87□□□□□ -0.19
CLNS1A-204ENST00000525428 SYNMO15061 1565 aa13.87□□□□□ -0.19
CLNS1A-204ENST00000525428 ZNF771Q7L3S4 317 aaPredicted RBP13.86□□□□□ -0.19
CLNS1A-204ENST00000525428 CLTCQ00610 1675 aaKnown RBP13.86□□□□□ -0.19
CLNS1A-204ENST00000525428 CDK11BP21127 795 aaKnown RBP13.86□□□□□ -0.19
CLNS1A-204ENST00000525428 TPRNQ4KMQ1 711 aa13.86□□□□□ -0.19
CLNS1A-204ENST00000525428 DZIP1LQ8IYY4 767 aaKnown RBP13.86□□□□□ -0.19
CLNS1A-204ENST00000525428 GPT2Q8TD30 523 aa13.86□□□□□ -0.19
CLNS1A-204ENST00000525428 IBTKQ9P2D0 1353 aaPredicted RBP13.85□□□□□ -0.19
CLNS1A-204ENST00000525428 U2AF2P26368 475 aaKnown RBP eCLIP13.85□□□□□ -0.191e-18■■■□□ 18.5
CLNS1A-204ENST00000525428 MCM5P33992 734 aa13.85□□□□□ -0.19
CLNS1A-204ENST00000525428 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
CLNS1A-204ENST00000525428 AGLP35573 1532 aa13.85□□□□□ -0.19
CLNS1A-204ENST00000525428 ARHGAP31Q2M1Z3 1444 aa13.84□□□□□ -0.19
CLNS1A-204ENST00000525428 TMEM63CQ9P1W3 806 aa13.84□□□□□ -0.19
CLNS1A-204ENST00000525428 KIF3AQ9Y496 699 aa13.84□□□□□ -0.19
CLNS1A-204ENST00000525428 ZKSCAN2Q63HK3 967 aa13.83□□□□□ -0.19
CLNS1A-204ENST00000525428 PDCL2Q8N4E4 241 aa13.83□□□□□ -0.19
CLNS1A-204ENST00000525428 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.19
CLNS1A-204ENST00000525428 ERVK-7P63135 1459 aa13.83□□□□□ -0.2
CLNS1A-204ENST00000525428 MROH2AA6NES4 1674 aa13.83□□□□□ -0.2
CLNS1A-204ENST00000525428 AK9Q5TCS8 1911 aa13.83□□□□□ -0.2
CLNS1A-204ENST00000525428 TCP11L2Q8N4U5 519 aa13.83□□□□□ -0.2
CLNS1A-204ENST00000525428 IPO4Q8TEX9 1081 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-204ENST00000525428 TTC12Q9H892 705 aaPredicted RBP13.83□□□□□ -0.2
CLNS1A-204ENST00000525428 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-204ENST00000525428 BCL2L12Q9HB09 334 aa13.82□□□□□ -0.2
CLNS1A-204ENST00000525428 SMC4Q9NTJ3 1288 aa13.82□□□□□ -0.2
CLNS1A-204ENST00000525428 KIF16BQ96L93 1317 aa13.82□□□□□ -0.2
CLNS1A-204ENST00000525428 FOXD4L6Q3SYB3 417 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-204ENST00000525428 FOXD4L3Q6VB84 417 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-204ENST00000525428 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-204ENST00000525428 LRSAM1Q6UWE0 723 aa13.81□□□□□ -0.2
CLNS1A-204ENST00000525428 NOLC1Q14978 699 aaKnown RBP eCLIP13.81□□□□□ -0.29e-7■■■□□ 16.9
CLNS1A-204ENST00000525428 TSR2Q969E8 191 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-204ENST00000525428 PLCB2Q00722 1185 aa13.8□□□□□ -0.2
CLNS1A-204ENST00000525428 ANKRD45Q5TZF3 282 aa13.8□□□□□ -0.2
CLNS1A-204ENST00000525428 TBC1D9Q6ZT07 1266 aa13.8□□□□□ -0.2
CLNS1A-204ENST00000525428 ZGPATQ8N5A5 531 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-204ENST00000525428 TRIM27P14373 513 aa13.8□□□□□ -0.2
CLNS1A-204ENST00000525428 C14orf93Q9H972 538 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-204ENST00000525428 HMGN5P82970 282 aaKnown RBP13.79□□□□□ -0.2
CLNS1A-204ENST00000525428 CHMP4AQ9BY43 222 aa13.79□□□□□ -0.2
CLNS1A-204ENST00000525428 TNRQ92752 1358 aa13.79□□□□□ -0.2
CLNS1A-204ENST00000525428 KIF1BO60333 1816 aa13.79□□□□□ -0.2
CLNS1A-204ENST00000525428 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
CLNS1A-204ENST00000525428 CLEC17AQ6ZS10 378 aa13.79□□□□□ -0.2
CLNS1A-204ENST00000525428 PRIMPOLQ96LW4 560 aa13.79□□□□□ -0.2
CLNS1A-204ENST00000525428 NUCB2P80303 420 aa13.78□□□□□ -0.2
CLNS1A-204ENST00000525428 HDAC1Q13547 482 aaPredicted RBP13.78□□□□□ -0.2
CLNS1A-204ENST00000525428 ADGRB3O60242 1522 aa13.78□□□□□ -0.2
CLNS1A-204ENST00000525428 TRPM1Q7Z4N2 1603 aa13.78□□□□□ -0.2
CLNS1A-204ENST00000525428 PREX1Q8TCU6 1659 aa13.78□□□□□ -0.2
CLNS1A-204ENST00000525428 KCNJ4P48050 445 aa13.78□□□□□ -0.2
CLNS1A-204ENST00000525428 CHD1LQ86WJ1 897 aa13.77□□□□□ -0.2
CLNS1A-204ENST00000525428 GPRASP1Q5JY77 1395 aa13.77□□□□□ -0.2
CLNS1A-204ENST00000525428 PIK3C2GO75747 1445 aa13.77□□□□□ -0.2
CLNS1A-204ENST00000525428 MADDQ8WXG6 1647 aa13.77□□□□□ -0.21
CLNS1A-204ENST00000525428 LTKP29376 864 aa13.77□□□□□ -0.21
CLNS1A-204ENST00000525428 USP25Q9UHP3 1055 aa13.77□□□□□ -0.21
CLNS1A-204ENST00000525428 RPGRIP1LQ68CZ1 1315 aa13.76□□□□□ -0.21
CLNS1A-204ENST00000525428 NUCB1Q02818 461 aa13.76□□□□□ -0.21
CLNS1A-204ENST00000525428 TMEM57Q8N5G2 664 aa13.76□□□□□ -0.21
CLNS1A-204ENST00000525428 SLC26A8Q96RN1 970 aa13.76□□□□□ -0.21
CLNS1A-204ENST00000525428 DDX19BQ9UMR2 479 aa13.76□□□□□ -0.21
CLNS1A-204ENST00000525428 PIK3C2BO00750 1634 aa13.75□□□□□ -0.21
CLNS1A-204ENST00000525428 PIBF1Q8WXW3 757 aa13.75□□□□□ -0.21
CLNS1A-204ENST00000525428 C1orf115Q9H7X2 142 aa13.75□□□□□ -0.21
CLNS1A-204ENST00000525428 MYO5BQ9ULV0 1848 aa13.75□□□□□ -0.21
CLNS1A-204ENST00000525428 NOB1Q9ULX3 412 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-204ENST00000525428 BMP2KLQ5H9B9 411 aa13.74□□□□□ -0.21
CLNS1A-204ENST00000525428 TAF7LQ5H9L4 462 aa13.74□□□□□ -0.21
CLNS1A-204ENST00000525428 RUNDC1Q96C34 613 aa13.74□□□□□ -0.21
CLNS1A-204ENST00000525428 WAPLQ7Z5K2 1190 aa13.74□□□□□ -0.21
CLNS1A-204ENST00000525428 TSPY26PQ9H489 355 aa13.74□□□□□ -0.21
CLNS1A-204ENST00000525428 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
CLNS1A-204ENST00000525428 RIOK3O14730 519 aaKnown RBP13.74□□□□□ -0.21
CLNS1A-204ENST00000525428 EXOSC9Q06265 439 aaKnown RBP13.74□□□□□ -0.21
CLNS1A-204ENST00000525428 TXNDC2Q86VQ3 553 aa13.74□□□□□ -0.21
CLNS1A-204ENST00000525428 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
CLNS1A-204ENST00000525428 SSH1Q8WYL5 1049 aa13.74□□□□□ -0.21
CLNS1A-204ENST00000525428 ZC3H13Q5T200 1668 aaKnown RBP13.73□□□□□ -0.21
CLNS1A-204ENST00000525428 GTF2F1P35269 517 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLNS1A-204ENST00000525428 IRX5P78411 483 aaPredicted RBP13.73□□□□□ -0.21
CLNS1A-204ENST00000525428 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
CLNS1A-204ENST00000525428 RIMS2Q9UQ26 1411 aa13.73□□□□□ -0.21
CLNS1A-204ENST00000525428 GDPD2Q9HCC8 539 aa13.73□□□□□ -0.21
CLNS1A-204ENST00000525428 ZDHHC9Q9Y397 364 aa13.73□□□□□ -0.21
CLNS1A-204ENST00000525428 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
CLNS1A-204ENST00000525428 ATF7IPQ6VMQ6 1270 aa13.72□□□□□ -0.21
CLNS1A-204ENST00000525428 CERS3Q8IU89 383 aa13.72□□□□□ -0.21
CLNS1A-204ENST00000525428 TRERF1Q96PN7 1200 aa13.72□□□□□ -0.21
CLNS1A-204ENST00000525428 MINK1Q8N4C8 1332 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms