RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 PLSCR1O15162 318 aa19.99■□□□□ 0.79
CSTF3-206ENST00000524827 PTF1AQ7RTS3 328 aa19.99■□□□□ 0.79
CSTF3-206ENST00000524827 ANO8Q9HCE9 1232 aaPredicted RBP19.99■□□□□ 0.79
CSTF3-206ENST00000524827 WDR17Q8IZU2 1322 aa19.99■□□□□ 0.79
CSTF3-206ENST00000524827 AXIN2Q9Y2T1 843 aa19.98■□□□□ 0.79
CSTF3-206ENST00000524827 CASZ1Q86V15 1759 aa19.98■□□□□ 0.79
CSTF3-206ENST00000524827 BCL11BQ9C0K0 894 aaPredicted RBP19.97■□□□□ 0.79
CSTF3-206ENST00000524827 AKAP12Q02952 1782 aa19.96■□□□□ 0.79
CSTF3-206ENST00000524827 TRPM1Q7Z4N2 1603 aa19.96■□□□□ 0.79
CSTF3-206ENST00000524827 MARCH10Q8NA82 808 aaPredicted RBP19.96■□□□□ 0.79
CSTF3-206ENST00000524827 EVC2Q86UK5 1308 aa19.96■□□□□ 0.79
CSTF3-206ENST00000524827 BCL9O00512 1426 aa19.95■□□□□ 0.78
CSTF3-206ENST00000524827 RGPD5Q99666 1765 aa19.95■□□□□ 0.78
CSTF3-206ENST00000524827 ARHGEF25Q86VW2 580 aa19.94■□□□□ 0.78
CSTF3-206ENST00000524827 CDCA7Q9BWT1 371 aaPredicted RBP19.94■□□□□ 0.78
CSTF3-206ENST00000524827 TTC21BQ7Z4L5 1316 aa19.94■□□□□ 0.78
CSTF3-206ENST00000524827 PDGFDQ9GZP0 370 aaPredicted RBP19.93■□□□□ 0.78
CSTF3-206ENST00000524827 DCAF8L1A6NGE4 600 aa19.92■□□□□ 0.78
CSTF3-206ENST00000524827 SOX12O15370 315 aa19.92■□□□□ 0.78
CSTF3-206ENST00000524827 PROM2Q8N271 834 aa19.92■□□□□ 0.78
CSTF3-206ENST00000524827 KCNH5Q8NCM2 988 aa19.92■□□□□ 0.78
CSTF3-206ENST00000524827 CARD10Q9BWT7 1032 aa19.92■□□□□ 0.78
CSTF3-206ENST00000524827 NFAT5O94916 1531 aa19.92■□□□□ 0.78
CSTF3-206ENST00000524827 CSB-PGBD3P0DP91 1061 aa19.91■□□□□ 0.78
CSTF3-206ENST00000524827 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
CSTF3-206ENST00000524827 ZNF692Q9BU19 519 aaPredicted RBP19.9■□□□□ 0.78
CSTF3-206ENST00000524827 TTC21AQ8NDW8 1320 aa19.9■□□□□ 0.78
CSTF3-206ENST00000524827 ZBTB7AO95365 584 aa19.89■□□□□ 0.77
CSTF3-206ENST00000524827 MYOM1P52179 1685 aa19.89■□□□□ 0.77
CSTF3-206ENST00000524827 ABCC6O95255 1503 aa19.87■□□□□ 0.77
CSTF3-206ENST00000524827 TNS2Q63HR2 1409 aa19.87■□□□□ 0.77
CSTF3-206ENST00000524827 CCDC7Q96M83 1385 aa19.87■□□□□ 0.77
CSTF3-206ENST00000524827 TXNRD1Q16881 649 aa19.87■□□□□ 0.77
CSTF3-206ENST00000524827 ROCK2O75116 1388 aaKnown RBP19.86■□□□□ 0.77
CSTF3-206ENST00000524827 EXOC5O00471 708 aa19.86■□□□□ 0.77
CSTF3-206ENST00000524827 PTGER2P43116 358 aa19.86■□□□□ 0.77
CSTF3-206ENST00000524827 STK32BQ9NY57 414 aa19.86■□□□□ 0.77
CSTF3-206ENST00000524827 KTN1Q86UP2 1357 aaKnown RBP19.85■□□□□ 0.77
CSTF3-206ENST00000524827 MON2Q7Z3U7 1717 aa19.85■□□□□ 0.77
CSTF3-206ENST00000524827 ATF5Q9Y2D1 282 aaPredicted RBP19.84■□□□□ 0.77
CSTF3-206ENST00000524827 NHSQ6T4R5 1651 aa19.84■□□□□ 0.77
CSTF3-206ENST00000524827 SLC15A2Q16348 729 aa19.83■□□□□ 0.77
CSTF3-206ENST00000524827 USP54Q70EL1 1684 aa19.81■□□□□ 0.76
CSTF3-206ENST00000524827 SIN3AQ96ST3 1273 aa19.81■□□□□ 0.76
CSTF3-206ENST00000524827 USP31Q70CQ4 1352 aa19.81■□□□□ 0.76
CSTF3-206ENST00000524827 ERBB3P21860 1342 aa19.79■□□□□ 0.76
CSTF3-206ENST00000524827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
CSTF3-206ENST00000524827 ACSBG1Q96GR2 724 aa19.79■□□□□ 0.76
CSTF3-206ENST00000524827 MTFR1LQ9H019 292 aa19.79■□□□□ 0.76
CSTF3-206ENST00000524827 PAPPAQ13219 1627 aa19.79■□□□□ 0.76
CSTF3-206ENST00000524827 LTN1O94822 1766 aa19.78■□□□□ 0.76
CSTF3-206ENST00000524827 FHDC1Q9C0D6 1143 aaPredicted RBP19.78■□□□□ 0.76
CSTF3-206ENST00000524827 NLRP2Q9NX02 1062 aa19.78■□□□□ 0.76
CSTF3-206ENST00000524827 SBNO2Q9Y2G9 1366 aa19.78■□□□□ 0.76
CSTF3-206ENST00000524827 NME9Q86XW9 330 aa19.77■□□□□ 0.76
CSTF3-206ENST00000524827 SGIP1Q9BQI5 828 aa19.77■□□□□ 0.76
CSTF3-206ENST00000524827 SYT17Q9BSW7 474 aa19.77■□□□□ 0.76
CSTF3-206ENST00000524827 CD163L1Q9NR16 1453 aa19.77■□□□□ 0.76
CSTF3-206ENST00000524827 BTAF1O14981 1849 aa19.76■□□□□ 0.75
CSTF3-206ENST00000524827 NEUROD1Q13562 356 aa19.76■□□□□ 0.75
CSTF3-206ENST00000524827 IL2RBP14784 551 aa19.75■□□□□ 0.75
CSTF3-206ENST00000524827 ZNF784Q8NCA9 323 aaPredicted RBP19.73■□□□□ 0.75
CSTF3-206ENST00000524827 ANKRD24Q8TF21 1146 aa19.73■□□□□ 0.75
CSTF3-206ENST00000524827 KAT6BQ8WYB5 2073 aa19.72■□□□□ 0.75
CSTF3-206ENST00000524827 UTRNP46939 3433 aa19.72■□□□□ 0.75
CSTF3-206ENST00000524827 EDC4Q6P2E9 1401 aaKnown RBP19.71■□□□□ 0.75
CSTF3-206ENST00000524827 ZNF827Q17R98 1081 aa19.71■□□□□ 0.75
CSTF3-206ENST00000524827 TMC1Q8TDI8 760 aa19.71■□□□□ 0.75
CSTF3-206ENST00000524827 ARXQ96QS3 562 aa19.71■□□□□ 0.75
CSTF3-206ENST00000524827 HDGFL2Q7Z4V5 671 aaPredicted RBP19.7■□□□□ 0.74
CSTF3-206ENST00000524827 CHD4Q14839 1912 aa19.7■□□□□ 0.74
CSTF3-206ENST00000524827 MAP3K5Q99683 1374 aa19.7■□□□□ 0.74
CSTF3-206ENST00000524827 SLC12A5Q9H2X9 1139 aa19.69■□□□□ 0.74
CSTF3-206ENST00000524827 LRRC4BQ9NT99 713 aa19.69■□□□□ 0.74
CSTF3-206ENST00000524827 CARD11Q9BXL7 1154 aa19.68■□□□□ 0.74
CSTF3-206ENST00000524827 A0A1W2PP64 1363 aa19.68■□□□□ 0.74
CSTF3-206ENST00000524827 FAM208AQ9UK61 1670 aaKnown RBP19.66■□□□□ 0.74
CSTF3-206ENST00000524827 QSER1Q2KHR3 1735 aa19.65■□□□□ 0.74
CSTF3-206ENST00000524827 AKT1S1Q96B36 256 aa19.65■□□□□ 0.74
CSTF3-206ENST00000524827 TERF2IPQ9NYB0 399 aa19.65■□□□□ 0.74
CSTF3-206ENST00000524827 DDX54Q8TDD1 881 aaKnown RBP19.64■□□□□ 0.73
CSTF3-206ENST00000524827 IP6K1Q92551 441 aa19.64■□□□□ 0.73
CSTF3-206ENST00000524827 SLC27A3Q5K4L6 730 aa19.63■□□□□ 0.73
CSTF3-206ENST00000524827 LTV1Q96GA3 475 aaPredicted RBP19.63■□□□□ 0.73
CSTF3-206ENST00000524827 TUBGCP6Q96RT7 1819 aa19.62■□□□□ 0.73
CSTF3-206ENST00000524827 COL24A1Q17RW2 1714 aa19.62■□□□□ 0.73
CSTF3-206ENST00000524827 DOT1LQ8TEK3 1739 aa19.62■□□□□ 0.73
CSTF3-206ENST00000524827 PNPLA7Q6ZV29 1317 aa19.61■□□□□ 0.73
CSTF3-206ENST00000524827 SLC16A10Q8TF71 515 aa19.61■□□□□ 0.73
CSTF3-206ENST00000524827 PUS7Q96PZ0 661 aaKnown RBP19.6■□□□□ 0.73
CSTF3-206ENST00000524827 ANKRD36BQ8N2N9 1353 aa19.59■□□□□ 0.73
CSTF3-206ENST00000524827 KCNQ4P56696 695 aa19.59■□□□□ 0.73
CSTF3-206ENST00000524827 GPR162Q16538 588 aa19.59■□□□□ 0.73
CSTF3-206ENST00000524827 KLHL34Q8N239 644 aa19.59■□□□□ 0.73
CSTF3-206ENST00000524827 SYTL4Q96C24 671 aaPredicted RBP19.59■□□□□ 0.73
CSTF3-206ENST00000524827 SHANK3Q9BYB0 1731 aa19.59■□□□□ 0.73
CSTF3-206ENST00000524827 NSD2O96028 1365 aa19.58■□□□□ 0.73
CSTF3-206ENST00000524827 MAP3K19Q56UN5 1328 aa19.58■□□□□ 0.73
CSTF3-206ENST00000524827 POLD1P28340 1107 aa19.58■□□□□ 0.72
CSTF3-206ENST00000524827 PRIM1P49642 420 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms